BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018977
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK47126.1| unknown [Medicago truncatula]                          312   2e-83
ref|XP_003630737.1| Pentatricopeptide repeat-containing protein ...   312   2e-83
ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containi...   309   2e-82
ref|XP_004162737.1| PREDICTED: pentatricopeptide repeat-containi...   279   2e-73
ref|XP_004135378.1| PREDICTED: pentatricopeptide repeat-containi...   279   2e-73

>gb|AFK47126.1| unknown [Medicago truncatula]
          Length = 447

 Score =  312 bits (800), Expect = 2e-83
 Identities = 140/187 (74%), Positives = 164/187 (87%)
 Frame = -1

Query: 562 LVYTVFSKMYERNVSSWTSMIVGYAMHGHSMDAFECFHCMREAGVKPNHVTFVGVLSACV 383
           L Y VF+ M +RNVSSWTSMIVGYAMHGH+ +A  CFHCMRE+GVKPN+VTF+GVLSACV
Sbjct: 253 LAYEVFATMEDRNVSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNYVTFIGVLSACV 312

Query: 382 HAGKVQEGKYYFNMMKNTYGIKPTLAHYGCMVDLLGRVGLFDEAREMIQKMPMPANVVIW 203
           H G VQEG++YF+MMKN YGI P L HYGCMVDLLGR GLFD+AR M+++MPM  N V+W
Sbjct: 313 HGGTVQEGRFYFDMMKNIYGITPQLQHYGCMVDLLGRAGLFDDARRMVEEMPMKPNSVVW 372

Query: 202 GCLMGACEKFGNVEMAEWVAKHLRELEPWNDGVYVVLSNVYASKGLWKEVEKIRKVMKTG 23
           GCLMGACEK GNV+MAEWVA++L+ LEPWN+GVYVVLSN+YA+KGLWKEVE+IR  MK G
Sbjct: 373 GCLMGACEKHGNVDMAEWVAENLQALEPWNEGVYVVLSNIYANKGLWKEVERIRSFMKEG 432

Query: 22  KLAKIPA 2
           +LAKIPA
Sbjct: 433 RLAKIPA 439



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 4/138 (2%)
 Frame = -1

Query: 556 YTVFSKMYERNVSSWTSMIVGYAMHGHSMDAFECFHCMREAGVKPNHVTFVGVLSACVHA 377
           + VF + +E  + SW ++I G +  G +MDA   F  M+  G +P+ +T V V+ AC   
Sbjct: 152 HKVFDENHEPKLGSWNALISGLSQGGLAMDAIVVFVDMKRHGFEPDGITMVSVMCACGSI 211

Query: 376 G----KVQEGKYYFNMMKNTYGIKPTLAHYGCMVDLLGRVGLFDEAREMIQKMPMPANVV 209
           G     +Q  KY F    N + +   +     ++D+ G+ G  D A E+   M    NV 
Sbjct: 212 GDLYLALQLHKYVFQAKTNEWTV---ILMSNSLIDMYGKCGRMDLAYEVFATME-DRNVS 267

Query: 208 IWGCLMGACEKFGNVEMA 155
            W  ++      G+ + A
Sbjct: 268 SWTSMIVGYAMHGHAKEA 285


>ref|XP_003630737.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355524759|gb|AET05213.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 447

 Score =  312 bits (800), Expect = 2e-83
 Identities = 140/187 (74%), Positives = 164/187 (87%)
 Frame = -1

Query: 562 LVYTVFSKMYERNVSSWTSMIVGYAMHGHSMDAFECFHCMREAGVKPNHVTFVGVLSACV 383
           L Y VF+ M +RNVSSWTSMIVGYAMHGH+ +A  CFHCMRE+GVKPN+VTF+GVLSACV
Sbjct: 253 LAYEVFATMEDRNVSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNYVTFIGVLSACV 312

Query: 382 HAGKVQEGKYYFNMMKNTYGIKPTLAHYGCMVDLLGRVGLFDEAREMIQKMPMPANVVIW 203
           H G VQEG++YF+MMKN YGI P L HYGCMVDLLGR GLFD+AR M+++MPM  N V+W
Sbjct: 313 HGGTVQEGRFYFDMMKNIYGITPQLQHYGCMVDLLGRAGLFDDARRMVEEMPMKPNSVVW 372

Query: 202 GCLMGACEKFGNVEMAEWVAKHLRELEPWNDGVYVVLSNVYASKGLWKEVEKIRKVMKTG 23
           GCLMGACEK GNV+MAEWVA++L+ LEPWN+GVYVVLSN+YA+KGLWKEVE+IR  MK G
Sbjct: 373 GCLMGACEKHGNVDMAEWVAENLQALEPWNEGVYVVLSNIYANKGLWKEVERIRSFMKEG 432

Query: 22  KLAKIPA 2
           +LAKIPA
Sbjct: 433 RLAKIPA 439



 Score = 58.2 bits (139), Expect = 9e-07
 Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 4/138 (2%)
 Frame = -1

Query: 556 YTVFSKMYERNVSSWTSMIVGYAMHGHSMDAFECFHCMREAGVKPNHVTFVGVLSACVHA 377
           + VF + +E  + SW ++I G +  G +MDA   F  M+  G +P+ +T V V+SAC   
Sbjct: 152 HKVFDENHEPKLGSWNALISGLSQGGLAMDAIVVFVDMKRHGFEPDGITMVSVMSACGSI 211

Query: 376 G----KVQEGKYYFNMMKNTYGIKPTLAHYGCMVDLLGRVGLFDEAREMIQKMPMPANVV 209
           G     +Q  KY F    N + +   +     ++D+ G+ G  D A E+   M    NV 
Sbjct: 212 GDLYLALQLHKYVFQAKTNEWTV---ILMSNSLIDMYGKCGRMDLAYEVFATME-DRNVS 267

Query: 208 IWGCLMGACEKFGNVEMA 155
            W  ++      G+ + A
Sbjct: 268 SWTSMIVGYAMHGHAKEA 285


>ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77170
           [Vitis vinifera] gi|297738768|emb|CBI28013.3| unnamed
           protein product [Vitis vinifera]
          Length = 479

 Score =  309 bits (791), Expect = 2e-82
 Identities = 138/187 (73%), Positives = 161/187 (86%)
 Frame = -1

Query: 562 LVYTVFSKMYERNVSSWTSMIVGYAMHGHSMDAFECFHCMREAGVKPNHVTFVGVLSACV 383
           L Y VFS+M E NVSSWTSMIVGYAMHG   DA ECF CMREAGV+PNHVTF+GVLSACV
Sbjct: 285 LAYRVFSRMDEPNVSSWTSMIVGYAMHGQLYDALECFRCMREAGVRPNHVTFIGVLSACV 344

Query: 382 HAGKVQEGKYYFNMMKNTYGIKPTLAHYGCMVDLLGRVGLFDEAREMIQKMPMPANVVIW 203
           H G VQEGKYYF+MM   YG+ P + HYGCMVDLLGR GL +EAR+M+++MPM ANV++W
Sbjct: 345 HGGAVQEGKYYFDMMTTAYGLVPRMQHYGCMVDLLGRAGLLEEARKMVERMPMKANVIVW 404

Query: 202 GCLMGACEKFGNVEMAEWVAKHLRELEPWNDGVYVVLSNVYASKGLWKEVEKIRKVMKTG 23
           GCLMGACEK+GNV+M EWVA+HL ELEPWNDGV+VVLSN+YAS+GLW+EVE++R VMK  
Sbjct: 405 GCLMGACEKYGNVKMGEWVAEHLLELEPWNDGVFVVLSNIYASRGLWREVERVRGVMKER 464

Query: 22  KLAKIPA 2
           KL K+PA
Sbjct: 465 KLDKVPA 471


>ref|XP_004162737.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77170-like [Cucumis sativus]
          Length = 614

 Score =  279 bits (714), Expect = 2e-73
 Identities = 128/186 (68%), Positives = 147/186 (79%)
 Frame = -1

Query: 562 LVYTVFSKMYERNVSSWTSMIVGYAMHGHSMDAFECFHCMREAGVKPNHVTFVGVLSACV 383
           L   VFS M  RNVSSWTS+IVGYAMHG    A E F  MREAGV PN VTFVGVLSACV
Sbjct: 420 LAMKVFSNMGHRNVSSWTSLIVGYAMHGQVKQALENFQFMREAGVPPNQVTFVGVLSACV 479

Query: 382 HAGKVQEGKYYFNMMKNTYGIKPTLAHYGCMVDLLGRVGLFDEAREMIQKMPMPANVVIW 203
           H G + EGK+YF+MMKN YG KP L HYGCMVDLL + GL +EAR MI++MPM AN +IW
Sbjct: 480 HGGMINEGKHYFDMMKNVYGFKPQLPHYGCMVDLLSKAGLLEEARRMIEEMPMKANSIIW 539

Query: 202 GCLMGACEKFGNVEMAEWVAKHLRELEPWNDGVYVVLSNVYASKGLWKEVEKIRKVMKTG 23
           GCL+G CEK GNVE+ EW  KHL+ELEPWNDGVYVVLSN+YA+ G+WKE +K+R VMK  
Sbjct: 540 GCLIGGCEKHGNVEIGEWAGKHLQELEPWNDGVYVVLSNIYATNGMWKEAQKMRDVMKQR 599

Query: 22  KLAKIP 5
           +LAK+P
Sbjct: 600 QLAKVP 605


>ref|XP_004135378.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77170-like [Cucumis sativus]
          Length = 609

 Score =  279 bits (714), Expect = 2e-73
 Identities = 128/186 (68%), Positives = 147/186 (79%)
 Frame = -1

Query: 562 LVYTVFSKMYERNVSSWTSMIVGYAMHGHSMDAFECFHCMREAGVKPNHVTFVGVLSACV 383
           L   VFS M  RNVSSWTS+IVGYAMHG    A E F  MREAGV PN VTFVGVLSACV
Sbjct: 415 LAMKVFSNMGHRNVSSWTSLIVGYAMHGQVKQALENFQFMREAGVPPNQVTFVGVLSACV 474

Query: 382 HAGKVQEGKYYFNMMKNTYGIKPTLAHYGCMVDLLGRVGLFDEAREMIQKMPMPANVVIW 203
           H G + EGK+YF+MMKN YG KP L HYGCMVDLL + GL +EAR MI++MPM AN +IW
Sbjct: 475 HGGMINEGKHYFDMMKNVYGFKPQLPHYGCMVDLLSKAGLLEEARRMIEEMPMKANSIIW 534

Query: 202 GCLMGACEKFGNVEMAEWVAKHLRELEPWNDGVYVVLSNVYASKGLWKEVEKIRKVMKTG 23
           GCL+G CEK GNVE+ EW  KHL+ELEPWNDGVYVVLSN+YA+ G+WKE +K+R VMK  
Sbjct: 535 GCLIGGCEKHGNVEIGEWAGKHLQELEPWNDGVYVVLSNIYATNGMWKEAQKMRDVMKQR 594

Query: 22  KLAKIP 5
           +LAK+P
Sbjct: 595 QLAKVP 600