BLASTX nr result

ID: Bupleurum21_contig00018833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018833
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG52211.1|AC022288_10 hypothetical protein; 74056-75837 [Ara...   163   1e-38
gb|AAF97297.1|AC010164_19 Hypothetical protein [Arabidopsis thal...   163   1e-38
gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indi...   163   1e-38
gb|ABF94034.1| retrotransposon protein, putative, unclassified [...   162   3e-38
gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]...   161   6e-38

>gb|AAG52211.1|AC022288_10 hypothetical protein; 74056-75837 [Arabidopsis thaliana]
          Length = 503

 Score =  163 bits (413), Expect = 1e-38
 Identities = 82/144 (56%), Positives = 101/144 (70%)
 Frame = +1

Query: 10  EDRKSTGAMVFYLNENLITWVSQKQRCVALSSCEXXXXXXXXXXXXXVWLRNLLVQITGV 189
           +D +ST   VFYL E+ ITW S KQ  VALSSCE             +WL+ LL +ITG 
Sbjct: 342 DDGRSTAGHVFYLGESPITWCSSKQDVVALSSCEAEFMAGTEAAKQAIWLQELLSEITGT 401

Query: 190 KHGPVVIYVDNKSAIDLAKNPVFHGRSKHIDIRYHFIRECVERGEIEVKYVSTNEQCADV 369
             G V I +DNKSAI L KNPVFHGRSKHI  RYHFIRECVE G+IEV++V  NEQ AD+
Sbjct: 402 VCGKVTILIDNKSAIALTKNPVFHGRSKHIHRRYHFIRECVETGQIEVEHVPGNEQKADI 461

Query: 370 LTKAMATVKFEQMRALLGIQNLQK 441
           LTKA+  +KF++MR L+G+Q++ K
Sbjct: 462 LTKALGRIKFKEMRDLVGVQDVVK 485


>gb|AAF97297.1|AC010164_19 Hypothetical protein [Arabidopsis thaliana]
          Length = 308

 Score =  163 bits (413), Expect = 1e-38
 Identities = 82/144 (56%), Positives = 101/144 (70%)
 Frame = +1

Query: 10  EDRKSTGAMVFYLNENLITWVSQKQRCVALSSCEXXXXXXXXXXXXXVWLRNLLVQITGV 189
           +D +ST   VFYL E+ ITW S KQ  VALSSCE             +WL+ LL +ITG 
Sbjct: 147 DDGRSTAGHVFYLGESPITWCSSKQDVVALSSCEAEFMAGTEAAKQAIWLQELLSEITGT 206

Query: 190 KHGPVVIYVDNKSAIDLAKNPVFHGRSKHIDIRYHFIRECVERGEIEVKYVSTNEQCADV 369
             G V I +DNKSAI L KNPVFHGRSKHI  RYHFIRECVE G+IEV++V  NEQ AD+
Sbjct: 207 VCGKVTILIDNKSAIALTKNPVFHGRSKHIHRRYHFIRECVETGQIEVEHVPGNEQKADI 266

Query: 370 LTKAMATVKFEQMRALLGIQNLQK 441
           LTKA+  +KF++MR L+G+Q++ K
Sbjct: 267 LTKALGRIKFKEMRDLVGVQDVVK 290


>gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indica Group]
          Length = 1427

 Score =  163 bits (413), Expect = 1e-38
 Identities = 78/146 (53%), Positives = 103/146 (70%)
 Frame = +1

Query: 1    GNTEDRKSTGAMVFYLNENLITWVSQKQRCVALSSCEXXXXXXXXXXXXXVWLRNLLVQI 180
            G+ +DR+STG M FY+N +L++W SQKQ+ VALSSCE             +WLR LL ++
Sbjct: 1278 GDMDDRRSTGGMAFYVNSSLVSWCSQKQKTVALSSCEAEFMAATAAACHALWLRALLSEM 1337

Query: 181  TGVKHGPVVIYVDNKSAIDLAKNPVFHGRSKHIDIRYHFIRECVERGEIEVKYVSTNEQC 360
             G +  PV ++VDNKSAI L KNPVFHGRSKHID RYHFIRECVE G+I +++VS+ EQ 
Sbjct: 1338 MGTEAKPVKLFVDNKSAIALMKNPVFHGRSKHIDTRYHFIRECVESGQILIEFVSSEEQR 1397

Query: 361  ADVLTKAMATVKFEQMRALLGIQNLQ 438
            AD +TK +   K    R LLG+++L+
Sbjct: 1398 ADAMTKGLPAAKLATARHLLGVRDLR 1423


>gb|ABF94034.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1409

 Score =  162 bits (410), Expect = 3e-38
 Identities = 78/145 (53%), Positives = 101/145 (69%)
 Frame = +1

Query: 1    GNTEDRKSTGAMVFYLNENLITWVSQKQRCVALSSCEXXXXXXXXXXXXXVWLRNLLVQI 180
            G+ +DR+STG M FY+N++L+ W SQKQ+ VALSSCE             +WLR LL ++
Sbjct: 1260 GDLDDRRSTGGMAFYINQSLVAWSSQKQKTVALSSCEAEFMAATTAACQALWLRLLLAEV 1319

Query: 181  TGVKHGPVVIYVDNKSAIDLAKNPVFHGRSKHIDIRYHFIRECVERGEIEVKYVSTNEQC 360
             GV+   V ++VDN+SAI L KNPVFHGRSKHID RYHFIRECV+ G+I V++V T EQ 
Sbjct: 1320 AGVEEKAVKLFVDNRSAIALMKNPVFHGRSKHIDTRYHFIRECVDGGQIVVEFVRTEEQR 1379

Query: 361  ADVLTKAMATVKFEQMRALLGIQNL 435
            AD LTK +   K    R LLG+++L
Sbjct: 1380 ADALTKGLPAAKLVTARHLLGVRSL 1404


>gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108710383|gb|ABF98178.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1339

 Score =  161 bits (407), Expect = 6e-38
 Identities = 76/144 (52%), Positives = 100/144 (69%)
 Frame = +1

Query: 1    GNTEDRKSTGAMVFYLNENLITWVSQKQRCVALSSCEXXXXXXXXXXXXXVWLRNLLVQI 180
            G+++DR+ST  M FY N +L++W SQKQ+ VALSSCE             +WLR LL+++
Sbjct: 1193 GDSDDRRSTSGMAFYFNGSLVSWSSQKQKTVALSSCEAEFMAATAAACHALWLRGLLIEM 1252

Query: 181  TGVKHGPVVIYVDNKSAIDLAKNPVFHGRSKHIDIRYHFIRECVERGEIEVKYVSTNEQC 360
             G +  PV +YVDNKSAI L KNPVFHGRSKHID RYHFIRECVE G+I++++V   EQ 
Sbjct: 1253 IGAEARPVKLYVDNKSAIALMKNPVFHGRSKHIDTRYHFIRECVESGKIQIEFVRIEEQR 1312

Query: 361  ADVLTKAMATVKFEQMRALLGIQN 432
            AD LTK +   +    R LLG+++
Sbjct: 1313 ADALTKGLPAARLATARHLLGVRD 1336


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