BLASTX nr result

ID: Bupleurum21_contig00018817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018817
         (708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...   173   3e-41
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   129   8e-28
ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355...   126   4e-27
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...   125   8e-27
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   111   1e-22

>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
            gi|223541858|gb|EEF43404.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 668

 Score =  173 bits (438), Expect = 3e-41
 Identities = 89/238 (37%), Positives = 126/238 (52%), Gaps = 3/238 (1%)
 Frame = +2

Query: 2    RHLQGEKEYTERGFWRKLWDLNLPGKVINFLWRACRNCIPTAAALHSKHVDINLQCTWCQ 181
            R LQG+    E  FW K W L +P KV N +W+ C NCI TA  L  ++VD++  C WC 
Sbjct: 414  RLLQGDLGRPETSFWNKFWKLKIPTKVRNLMWKICSNCIRTAMNLRMRYVDLDPLCKWCN 473

Query: 182  THMEDIMHVLFQCTFAKEIWVSTGFQSMFVVMPQDTVMTVFQRVFDTRNKDQCALVGLLC 361
               E + HVLF C+ A+E W   GF+  F    +  + +  Q  F   ++D CA + L+C
Sbjct: 474  REPETLFHVLFGCSMARECWDLLGFRFSFPT--ESPICSWIQNFFIDNHEDTCAKMALVC 531

Query: 362  WGLWYRRNQWVWERINQSVFGMKAMAFNML---TDWKKAKLEVDKGKAQVQIGDRVWSKP 532
              LW +RN WVW + + + +G+ + A  +L   T  + A  E+           R W+KP
Sbjct: 532  GSLWNQRNHWVWNKQSNTTYGVISPANQLLEQRTRAQSADEEIAPPLGHNTDVTRKWTKP 591

Query: 533  PTGWIKINVDAACKQDLDFVGVGCVIRDETGKFLRARSNVIEGSMQPSMAEALSMREA 706
              GW+KIN D A       +G+GCV+RD  G+ + ARS    G      AEALSM+EA
Sbjct: 592  ELGWLKINTDTALFLKQGRIGLGCVVRDSNGRMIMARSERRVGRFTAREAEALSMKEA 649


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  129 bits (323), Expect = 8e-28
 Identities = 81/235 (34%), Positives = 108/235 (45%), Gaps = 15/235 (6%)
 Frame = +2

Query: 44   WRKLWDLNLPGKVINFLWRACRNCIPTAAALHSKHVDINLQCTWCQTHMEDIMHVLFQCT 223
            W +LW +  P K++NF WRA RNC+PT  AL  +HVD  + C  C++ +E  +H L +C 
Sbjct: 508  WAQLWKVTAPPKILNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSELETTLHALVECV 567

Query: 224  FAKEIWVSTGFQSM------FVVMPQDTVMTVFQRVFDTRNKDQCALVGL-----LCWGL 370
             A+++W  +G   +      FV    D + T+F           C  V       +CWGL
Sbjct: 568  AARDVWDESGLAMLQGNFGSFV----DWLATMFA---------YCDFVVFAKYLAVCWGL 614

Query: 371  WYRRNQWVWE----RINQSVFGMKAMAFNMLTDWKKAKLEVDKGKAQVQIGDRVWSKPPT 538
            W+RRN  VW        Q V G     F ML  W  A  E       V      W KP  
Sbjct: 615  WWRRNDVVWNGRIWHSQQVVNG----CFTMLESWFHAN-ETLATAVTVPSYSSKWQKPDY 669

Query: 539  GWIKINVDAACKQDLDFVGVGCVIRDETGKFLRARSNVIEGSMQPSMAEALSMRE 703
            GWIKINVD A   D     +G V RD  G+F+   +        P + EAL +RE
Sbjct: 670  GWIKINVDGAVFPDKG--AIGAVFRDHQGRFMGGFAKPFPHQTLPKVVEALGVRE 722


>ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355523410|gb|AET03864.1|
            Cytochrome P450 [Medicago truncatula]
          Length = 687

 Score =  126 bits (317), Expect = 4e-27
 Identities = 73/224 (32%), Positives = 106/224 (47%), Gaps = 3/224 (1%)
 Frame = +2

Query: 44   WRKLWDLNLPGKVINFLWRACRNCIPTAAALHSKHVDINLQCTWCQTHMEDIMHVLFQCT 223
            W  +W L LP KV NFLWRACRNC+PT   L SK V    +C  C    ED  H+ F C+
Sbjct: 366  WNYIWRLKLPPKVKNFLWRACRNCLPTRIRLQSKGVQCIDRCAVCDDFGEDSNHLFFMCS 425

Query: 224  FAKEIWVSTGFQSMFVVMPQDTVM--TVFQRVFDTRNKDQCALVGLLCWGLWYRRNQWVW 397
             +   W   G  S  + +    V   T    +    ++ Q  +  +  W +W  RN  VW
Sbjct: 426  KSMLYWQRIGLWSPLMAVFDINVSFPTNVFAILQHLDQQQKQIFSVTLWSIWKHRNNKVW 485

Query: 398  ERINQSVFGMKAMAFNMLTDWKKAK-LEVDKGKAQVQIGDRVWSKPPTGWIKINVDAACK 574
              I  +   + A A ++LT W+ A+ +     +      D  W KP  G    NVDA+  
Sbjct: 486  NNITDTAQDICARAGSLLTSWRNAQNIRHPSPQNPSTPNDLKWVKPSPGRFTCNVDASFS 545

Query: 575  QDLDFVGVGCVIRDETGKFLRARSNVIEGSMQPSMAEALSMREA 706
            Q  + VG+G  IRDE G+F+ A++  +   +   + EAL +  A
Sbjct: 546  QARNRVGIGVCIRDEEGRFVLAKTEWMTPLLDVELGEALGLLSA 589


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score =  125 bits (314), Expect = 8e-27
 Identities = 64/207 (30%), Positives = 104/207 (50%), Gaps = 3/207 (1%)
 Frame = +2

Query: 38   GFWRKLWDLNLPGKVINFLWRACRNCIPTAAALHSKHVDINLQCTWCQTHMEDIMHVLFQ 217
            G W  LW+L +P KV  FLWR+CRN +PT   L  + V+    C  C+   ED MH+ F 
Sbjct: 1415 GNWVLLWNLKVPPKVKTFLWRSCRNALPTRVRLQDRGVNCTKTCALCENEDEDSMHLFFY 1474

Query: 218  CTFAKEIWVSTGFQSMFVVMPQDTV---MTVFQRVFDTRNKDQCALVGLLCWGLWYRRNQ 388
            CT +++ W   G  S      Q  +   +T+F+ +    +  Q  +   + W +W +RN 
Sbjct: 1475 CTKSRQCWQQLGLWSKVQQKAQLNLSFGVTMFE-ILQELDSSQRVIWACVMWSIWKQRND 1533

Query: 389  WVWERINQSVFGMKAMAFNMLTDWKKAKLEVDKGKAQVQIGDRVWSKPPTGWIKINVDAA 568
             +W     +   ++    N+LT W+ A+               +W KP  G  K NVDAA
Sbjct: 1534 CIWRNEVMTTAAVRDRGLNLLTGWQNAQ--------------DIWRKPDEGHFKCNVDAA 1579

Query: 569  CKQDLDFVGVGCVIRDETGKFLRARSN 649
              ++ + VG+G  IRD++G+ ++AR++
Sbjct: 1580 FFKESNRVGIGICIRDDSGRLVKARTS 1606


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  111 bits (278), Expect = 1e-22
 Identities = 67/227 (29%), Positives = 107/227 (47%)
 Frame = +2

Query: 14   GEKEYTERGFWRKLWDLNLPGKVINFLWRACRNCIPTAAALHSKHVDINLQCTWCQTHME 193
            GE+E TE   WR++W L  P K+ +FLWRAC+  +     L S+H+ ++  C+ C    E
Sbjct: 1038 GERE-TE--LWRRVWQLQGPPKLSHFLWRACKGSLAVKGRLFSRHISVDATCSVCGDPDE 1094

Query: 194  DIMHVLFQCTFAKEIWVSTGFQSMFVVMPQDTVMTVFQRVFDTRNKDQCALVGLLCWGLW 373
             I H LF CTFA+ IW  +GF S+ +  P  +     + +     K++   +    W  W
Sbjct: 1095 SINHALFDCTFARAIWQVSGFASLMMNAPLSSFSERLEWLAKHATKEEFRTMCSFMWAGW 1154

Query: 374  YRRNQWVWERINQSVFGMKAMAFNMLTDWKKAKLEVDKGKAQVQIGDRVWSKPPTGWIKI 553
            + RN+ ++E        +      ++ D+ +    V +G         +WS PPTG  K+
Sbjct: 1155 FCRNKLIFENELSDAPLVAKRFSKLVADYCEYAGSVFRGSGGGCGSSALWSPPPTGMFKV 1214

Query: 554  NVDAACKQDLDFVGVGCVIRDETGKFLRARSNVIEGSMQPSMAEALS 694
            N DA    + + VG+G VIR   G         +       MAEA++
Sbjct: 1215 NFDAHLSPNGE-VGLGVVIRANDGGIKMLGVKRVAARWTAVMAEAMA 1260


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