BLASTX nr result

ID: Bupleurum21_contig00018779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018779
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65725.1| hypothetical protein VITISV_004448 [Vitis vinifera]    90   2e-16
ref|XP_002284793.1| PREDICTED: uncharacterized protein LOC100261...    89   5e-16
ref|XP_002309595.1| predicted protein [Populus trichocarpa] gi|2...    85   1e-14
ref|XP_002514343.1| conserved hypothetical protein [Ricinus comm...    80   3e-13
ref|XP_003526429.1| PREDICTED: uncharacterized protein LOC100805...    77   2e-12

>emb|CAN65725.1| hypothetical protein VITISV_004448 [Vitis vinifera]
          Length = 143

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 45/114 (39%), Positives = 67/114 (58%), Gaps = 1/114 (0%)
 Frame = -1

Query: 578 RNEGLWRSHCLVGIACMVITLQDGHLSDQTAATVVVKINGVAESKGNVQWSNQRQCEAWR 399
           R E   +S CLVG+ CM+I+L+  +L       +   +  + E K   +WS++R C  W+
Sbjct: 36  RKENSLKSKCLVGLTCMIISLEMSNLMSGEGLAIAQDLQLIGERKEVTRWSDKRMCPPWQ 95

Query: 398 VNSLETVVPENLPRPSARRRYDKVLLDHHTRHTVNAPPLKSLTLVGSKK-CFTL 240
           +NSLET+VPENLPRPS RRR++ V       H+  AP +K L    +K  CF++
Sbjct: 96  LNSLETIVPENLPRPSTRRRWESV------GHSTTAPAVKILFRAHTKSDCFSM 143


>ref|XP_002284793.1| PREDICTED: uncharacterized protein LOC100261242 [Vitis vinifera]
          Length = 143

 Score = 89.0 bits (219), Expect = 5e-16
 Identities = 44/114 (38%), Positives = 67/114 (58%), Gaps = 1/114 (0%)
 Frame = -1

Query: 578 RNEGLWRSHCLVGIACMVITLQDGHLSDQTAATVVVKINGVAESKGNVQWSNQRQCEAWR 399
           R E   +S C+VG+ CM+I+L+  +L       +   +  + E K   +WS++R C  W+
Sbjct: 36  RKENSLKSKCVVGLTCMIISLEMSNLMSGEGLAIAQDLQLIGERKEVTRWSDKRMCPPWQ 95

Query: 398 VNSLETVVPENLPRPSARRRYDKVLLDHHTRHTVNAPPLKSLTLVGSKK-CFTL 240
           +NSLET+VPENLPRPS RRR++ V       H+  AP +K L    +K  CF++
Sbjct: 96  LNSLETIVPENLPRPSTRRRWESV------GHSTTAPAVKILFRAHTKSDCFSM 143


>ref|XP_002309595.1| predicted protein [Populus trichocarpa] gi|222855571|gb|EEE93118.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 45/112 (40%), Positives = 67/112 (59%), Gaps = 4/112 (3%)
 Frame = -1

Query: 563 WRSHCLVGIACMVITLQ-DGHLSDQTAATVVVKINGVAESKGNV---QWSNQRQCEAWRV 396
           WR+ C++G ACM+I L+  G L       +  ++    ESK N+   +WS++R C  W  
Sbjct: 38  WRNRCVLGAACMIIGLEMGGGLVGGEDLAMAREMQVAVESKENLNGPRWSDKRMCPPWSR 97

Query: 395 NSLETVVPENLPRPSARRRYDKVLLDHHTRHTVNAPPLKSLTLVGSKKCFTL 240
           NSLET+VPENLPRPSA RR+++V    +     NAP +K + +  S  CF++
Sbjct: 98  NSLETIVPENLPRPSAHRRWEEVRFSKN-----NAPAVKVIVIKRSNGCFSM 144


>ref|XP_002514343.1| conserved hypothetical protein [Ricinus communis]
           gi|223546799|gb|EEF48297.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 155

 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 40/82 (48%), Positives = 57/82 (69%), Gaps = 5/82 (6%)
 Frame = -1

Query: 563 WRSHCLVGIACMVITLQ-DGHLSDQT-AATVVVKINGVAESKGNVQ---WSNQRQCEAWR 399
           WRS C++G+ACM+I L+ D  ++++T  A      + V E K   +   WS++R C  WR
Sbjct: 43  WRSQCVLGMACMIIGLEMDNLVNEETNLAMAAENSSSVVELKVKPKTRRWSDKRMCPPWR 102

Query: 398 VNSLETVVPENLPRPSARRRYD 333
           +NSLET+VPENLPRPSARRR++
Sbjct: 103 LNSLETIVPENLPRPSARRRWE 124


>ref|XP_003526429.1| PREDICTED: uncharacterized protein LOC100805091 [Glycine max]
          Length = 146

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 45/122 (36%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
 Frame = -1

Query: 578 RNEGLWRSHCLVGIACMVITLQDGHLSDQTAATVVVK-------INGVAESKGNVQWSNQ 420
           +NE  W+  C+V     +I L+  +        + +K       +   + S G  +WS +
Sbjct: 30  KNEACWKRQCVVMGVASIIGLEMCNSVAMAHEAIEIKTMPFSNQVVSNSNSYGGAKWSEK 89

Query: 419 RQCEAWRVNSLETVVPENLPRPSARRRYDKVLLDHHTRHTVNAPPLKSLTLVGSKK--CF 246
           R C  W+ NSLET+VPENLPRPSARRRY+ V     T     APPL +  +V S K  CF
Sbjct: 90  RMCPPWQGNSLETIVPENLPRPSARRRYEAVRSSSKT-----APPLSAPIIVQSNKGSCF 144

Query: 245 TL 240
           ++
Sbjct: 145 SM 146


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