BLASTX nr result

ID: Bupleurum21_contig00018749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018749
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522169.1| RING finger protein 113A, putative [Ricinus ...   112   1e-24
ref|XP_002522183.1| RING finger protein 113A, putative [Ricinus ...   112   1e-24
ref|XP_004160720.1| PREDICTED: zinc finger CCCH domain-containin...   116   2e-24
ref|XP_004149426.1| PREDICTED: zinc finger CCCH domain-containin...   116   2e-24
ref|NP_001046620.1| Os02g0301000 [Oryza sativa Japonica Group] g...   114   6e-24

>ref|XP_002522169.1| RING finger protein 113A, putative [Ricinus communis]
           gi|223538607|gb|EEF40210.1| RING finger protein 113A,
           putative [Ricinus communis]
          Length = 325

 Score =  112 bits (280), Expect(2) = 1e-24
 Identities = 45/53 (84%), Positives = 51/53 (96%)
 Frame = +3

Query: 3   ARFDYQPDICKDYKETGYCGYGDACKFLHDRGDHKSGWQLEKDWEEKEKARKK 161
           ARFDYQPDICKDYKETGYCGYGD+CKF+HDRGD+KSGWQLEK+W+E EK RK+
Sbjct: 184 ARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQLEKEWDEAEKIRKR 236



 Score = 25.8 bits (55), Expect(2) = 1e-24
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = +1

Query: 151 QERNLGLKQLE--DAEQSNEDDDGMLLLPS*CF 243
           ++RNL L +LE    E   EDDD    LP  CF
Sbjct: 234 RKRNLALGELEGGTGENEEEDDDDEHELPFACF 266


>ref|XP_002522183.1| RING finger protein 113A, putative [Ricinus communis]
           gi|223538621|gb|EEF40224.1| RING finger protein 113A,
           putative [Ricinus communis]
          Length = 261

 Score =  112 bits (280), Expect(2) = 1e-24
 Identities = 45/53 (84%), Positives = 51/53 (96%)
 Frame = +3

Query: 3   ARFDYQPDICKDYKETGYCGYGDACKFLHDRGDHKSGWQLEKDWEEKEKARKK 161
           ARFDYQPDICKDYKETGYCGYGD+CKF+HDRGD+KSGWQLEK+W+E EK RK+
Sbjct: 163 ARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQLEKEWDEAEKIRKR 215



 Score = 25.4 bits (54), Expect(2) = 1e-24
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = +1

Query: 151 QERNLGLKQLE--DAEQSNEDDDGMLLLPS*CF 243
           ++RNL L +LE    E   EDDD    LP  CF
Sbjct: 213 RKRNLALGELEGGTGENEEEDDDDEDELPFACF 245


>ref|XP_004160720.1| PREDICTED: zinc finger CCCH domain-containing protein 1-like
           [Cucumis sativus]
          Length = 300

 Score =  116 bits (290), Expect = 2e-24
 Identities = 48/53 (90%), Positives = 52/53 (98%)
 Frame = +3

Query: 3   ARFDYQPDICKDYKETGYCGYGDACKFLHDRGDHKSGWQLEKDWEEKEKARKK 161
           ARFDYQPDICKDYKETGYCGYGDACKF+HDRGD+KSGWQLEK+WEE EKARK+
Sbjct: 182 ARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKR 234


>ref|XP_004149426.1| PREDICTED: zinc finger CCCH domain-containing protein 1-like
           [Cucumis sativus]
          Length = 322

 Score =  116 bits (290), Expect = 2e-24
 Identities = 48/53 (90%), Positives = 52/53 (98%)
 Frame = +3

Query: 3   ARFDYQPDICKDYKETGYCGYGDACKFLHDRGDHKSGWQLEKDWEEKEKARKK 161
           ARFDYQPDICKDYKETGYCGYGDACKF+HDRGD+KSGWQLEK+WEE EKARK+
Sbjct: 182 ARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKR 234


>ref|NP_001046620.1| Os02g0301000 [Oryza sativa Japonica Group]
           gi|75324014|sp|Q6K4V3.1|C3H15_ORYSJ RecName: Full=Zinc
           finger CCCH domain-containing protein 15; Short=OsC3H15
           gi|48716667|dbj|BAD23334.1| putative zinc finger protein
           [Oryza sativa Japonica Group]
           gi|113536151|dbj|BAF08534.1| Os02g0301000 [Oryza sativa
           Japonica Group]
          Length = 326

 Score =  114 bits (286), Expect = 6e-24
 Identities = 46/53 (86%), Positives = 52/53 (98%)
 Frame = +3

Query: 3   ARFDYQPDICKDYKETGYCGYGDACKFLHDRGDHKSGWQLEKDWEEKEKARKK 161
           ARFDYQPDICKDYKETGYCGYGD+CKF+HDRGD+KSGWQ+EK+WEE EKARK+
Sbjct: 184 ARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQIEKEWEEAEKARKR 236


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