BLASTX nr result
ID: Bupleurum21_contig00018744
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00018744
(278 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containi... 134 8e-30
emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera] 134 8e-30
emb|CBI22375.3| unnamed protein product [Vitis vinifera] 131 6e-29
ref|XP_002884468.1| pentatricopeptide repeat-containing protein ... 129 2e-28
dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana] 128 4e-28
>ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 134 bits (337), Expect = 8e-30
Identities = 66/92 (71%), Positives = 74/92 (80%)
Frame = -1
Query: 278 FFPDVVTYNIMIGSLCSRXXXXXXXXXXXXXLEDNCKPTVITYTILIEATIVDGGINEAM 99
F PD+VTYNIMIGSLC+R L DNC PTVITYTILIEATIV+GGINEAM
Sbjct: 168 FLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAM 227
Query: 98 KLLDEMLSRGLQADMYTYNALIRGMCREGMIE 3
KLL+EML+RGL DMYTYNA+IRGMC+EGM+E
Sbjct: 228 KLLEEMLARGLLPDMYTYNAIIRGMCKEGMVE 259
Score = 64.7 bits (156), Expect = 7e-09
Identities = 33/90 (36%), Positives = 46/90 (51%)
Frame = -1
Query: 272 PDVVTYNIMIGSLCSRXXXXXXXXXXXXXLEDNCKPTVITYTILIEATIVDGGINEAMKL 93
PD+ TYN +I +C CKP VI+Y IL+ A + G +E KL
Sbjct: 240 PDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKL 299
Query: 92 LDEMLSRGLQADMYTYNALIRGMCREGMIE 3
+ EM SRG + + TY+ LI +CR G I+
Sbjct: 300 VAEMFSRGCEPNKVTYSILISSLCRFGRID 329
Score = 60.8 bits (146), Expect = 1e-07
Identities = 28/90 (31%), Positives = 50/90 (55%)
Frame = -1
Query: 272 PDVVTYNIMIGSLCSRXXXXXXXXXXXXXLEDNCKPTVITYTILIEATIVDGGINEAMKL 93
PDV++YNI++ + ++ C+P +TY+ILI + G I+EA+ +
Sbjct: 275 PDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISV 334
Query: 92 LDEMLSRGLQADMYTYNALIRGMCREGMIE 3
L M+ + L D Y+Y+ LI +C+EG ++
Sbjct: 335 LKVMIEKELTPDTYSYDPLISALCKEGRLD 364
Score = 59.3 bits (142), Expect = 3e-07
Identities = 28/90 (31%), Positives = 46/90 (51%)
Frame = -1
Query: 272 PDVVTYNIMIGSLCSRXXXXXXXXXXXXXLEDNCKPTVITYTILIEATIVDGGINEAMKL 93
PD+V YN ++ +LC C P V +Y +I A G + A+ +
Sbjct: 380 PDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGM 439
Query: 92 LDEMLSRGLQADMYTYNALIRGMCREGMIE 3
+ M+S+G+ D TYN+LI +CR+G++E
Sbjct: 440 VPAMISKGVDPDEITYNSLISCLCRDGLVE 469
>emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 134 bits (337), Expect = 8e-30
Identities = 66/92 (71%), Positives = 74/92 (80%)
Frame = -1
Query: 278 FFPDVVTYNIMIGSLCSRXXXXXXXXXXXXXLEDNCKPTVITYTILIEATIVDGGINEAM 99
F PD+VTYNIMIGSLC+R L DNC PTVITYTILIEATIV+GGINEAM
Sbjct: 178 FLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAM 237
Query: 98 KLLDEMLSRGLQADMYTYNALIRGMCREGMIE 3
KLL+EML+RGL DMYTYNA+IRGMC+EGM+E
Sbjct: 238 KLLEEMLARGLLPDMYTYNAIIRGMCKEGMVE 269
Score = 63.2 bits (152), Expect = 2e-08
Identities = 32/90 (35%), Positives = 46/90 (51%)
Frame = -1
Query: 272 PDVVTYNIMIGSLCSRXXXXXXXXXXXXXLEDNCKPTVITYTILIEATIVDGGINEAMKL 93
PD+ TYN +I +C C+P VI+Y IL+ A + G +E KL
Sbjct: 250 PDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKL 309
Query: 92 LDEMLSRGLQADMYTYNALIRGMCREGMIE 3
+ EM SRG + + TY+ LI +CR G I+
Sbjct: 310 VAEMFSRGCEPNKVTYSILISSLCRFGRID 339
Score = 60.8 bits (146), Expect = 1e-07
Identities = 28/90 (31%), Positives = 50/90 (55%)
Frame = -1
Query: 272 PDVVTYNIMIGSLCSRXXXXXXXXXXXXXLEDNCKPTVITYTILIEATIVDGGINEAMKL 93
PDV++YNI++ + ++ C+P +TY+ILI + G I+EA+ +
Sbjct: 285 PDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISV 344
Query: 92 LDEMLSRGLQADMYTYNALIRGMCREGMIE 3
L M+ + L D Y+Y+ LI +C+EG ++
Sbjct: 345 LKVMIEKELTPDTYSYDPLISALCKEGRLD 374
Score = 59.7 bits (143), Expect = 2e-07
Identities = 28/90 (31%), Positives = 46/90 (51%)
Frame = -1
Query: 272 PDVVTYNIMIGSLCSRXXXXXXXXXXXXXLEDNCKPTVITYTILIEATIVDGGINEAMKL 93
PD+V YN ++ +LC C P V +Y +I A G + A+ +
Sbjct: 390 PDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGM 449
Query: 92 LDEMLSRGLQADMYTYNALIRGMCREGMIE 3
+ M+S+G+ D TYN+LI +CR+G++E
Sbjct: 450 VPAMISKGIDPDEITYNSLISCLCRDGLVE 479
>emb|CBI22375.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 131 bits (329), Expect = 6e-29
Identities = 65/90 (72%), Positives = 72/90 (80%)
Frame = -1
Query: 278 FFPDVVTYNIMIGSLCSRXXXXXXXXXXXXXLEDNCKPTVITYTILIEATIVDGGINEAM 99
F PD+VTYNIMIGSLC+R L DNC PTVITYTILIEATIV+GGINEAM
Sbjct: 168 FLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAM 227
Query: 98 KLLDEMLSRGLQADMYTYNALIRGMCREGM 9
KLL+EML+RGL DMYTYNA+IRGMC+EGM
Sbjct: 228 KLLEEMLARGLLPDMYTYNAIIRGMCKEGM 257
Score = 61.6 bits (148), Expect = 6e-08
Identities = 29/90 (32%), Positives = 47/90 (52%)
Frame = -1
Query: 272 PDVVTYNIMIGSLCSRXXXXXXXXXXXXXLEDNCKPTVITYTILIEATIVDGGINEAMKL 93
PD+ TYN +I +C C+P +TY+ILI + G I+EA+ +
Sbjct: 240 PDMYTYNAIIRGMCKEGMWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISV 299
Query: 92 LDEMLSRGLQADMYTYNALIRGMCREGMIE 3
L M+ + L D Y+Y+ LI +C+EG ++
Sbjct: 300 LKVMIEKELTPDTYSYDPLISALCKEGRLD 329
>ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297330308|gb|EFH60727.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 598
Score = 129 bits (324), Expect = 2e-28
Identities = 61/92 (66%), Positives = 74/92 (80%)
Frame = -1
Query: 278 FFPDVVTYNIMIGSLCSRXXXXXXXXXXXXXLEDNCKPTVITYTILIEATIVDGGINEAM 99
F PD VTYNIMIGSLCSR L DNC+PTVITYTILIEAT+++GG++EA+
Sbjct: 185 FSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEAL 244
Query: 98 KLLDEMLSRGLQADMYTYNALIRGMCREGMIE 3
KLLDEMLSRGL+ DM+TYN +IRGMC+EGM++
Sbjct: 245 KLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 276
Score = 72.0 bits (175), Expect = 5e-11
Identities = 35/90 (38%), Positives = 50/90 (55%)
Frame = -1
Query: 272 PDVVTYNIMIGSLCSRXXXXXXXXXXXXXLEDNCKPTVITYTILIEATIVDGGINEAMKL 93
PDV++YNI++ +L ++ + C P V+TY+ILI DG I EAM L
Sbjct: 292 PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNL 351
Query: 92 LDEMLSRGLQADMYTYNALIRGMCREGMIE 3
L M +GL D Y+Y+ LI CREG ++
Sbjct: 352 LKLMKEKGLTPDAYSYDPLIAAFCREGRLD 381
Score = 59.7 bits (143), Expect = 2e-07
Identities = 28/90 (31%), Positives = 44/90 (48%)
Frame = -1
Query: 272 PDVVTYNIMIGSLCSRXXXXXXXXXXXXXLEDNCKPTVITYTILIEATIVDGGINEAMKL 93
PD+V YN ++ +LC E C P +Y + A G A+ +
Sbjct: 397 PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHM 456
Query: 92 LDEMLSRGLQADMYTYNALIRGMCREGMIE 3
+ EM+S G+ D TYN++I +CREGM++
Sbjct: 457 ILEMVSNGIDPDEITYNSMISCLCREGMVD 486
Score = 58.5 bits (140), Expect = 5e-07
Identities = 30/90 (33%), Positives = 44/90 (48%)
Frame = -1
Query: 272 PDVVTYNIMIGSLCSRXXXXXXXXXXXXXLEDNCKPTVITYTILIEATIVDGGINEAMKL 93
PD+ TYN +I +C C+P VI+Y IL+ A + G E KL
Sbjct: 257 PDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKL 316
Query: 92 LDEMLSRGLQADMYTYNALIRGMCREGMIE 3
+ +M S ++ TY+ LI +CR+G IE
Sbjct: 317 MTKMFSEKCDPNVVTYSILITTLCRDGKIE 346
>dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 128 bits (322), Expect = 4e-28
Identities = 60/92 (65%), Positives = 74/92 (80%)
Frame = -1
Query: 278 FFPDVVTYNIMIGSLCSRXXXXXXXXXXXXXLEDNCKPTVITYTILIEATIVDGGINEAM 99
F PD VTYNIMIGSLCSR L DNC+PTVITYTILIEAT+++GG++EA+
Sbjct: 189 FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEAL 248
Query: 98 KLLDEMLSRGLQADMYTYNALIRGMCREGMIE 3
KL+DEMLSRGL+ DM+TYN +IRGMC+EGM++
Sbjct: 249 KLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Score = 72.0 bits (175), Expect = 5e-11
Identities = 35/90 (38%), Positives = 50/90 (55%)
Frame = -1
Query: 272 PDVVTYNIMIGSLCSRXXXXXXXXXXXXXLEDNCKPTVITYTILIEATIVDGGINEAMKL 93
PDV++YNI++ +L ++ + C P V+TY+ILI DG I EAM L
Sbjct: 296 PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNL 355
Query: 92 LDEMLSRGLQADMYTYNALIRGMCREGMIE 3
L M +GL D Y+Y+ LI CREG ++
Sbjct: 356 LKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385
Score = 60.1 bits (144), Expect = 2e-07
Identities = 28/90 (31%), Positives = 44/90 (48%)
Frame = -1
Query: 272 PDVVTYNIMIGSLCSRXXXXXXXXXXXXXLEDNCKPTVITYTILIEATIVDGGINEAMKL 93
PD+V YN ++ +LC E C P +Y + A G A+ +
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHM 460
Query: 92 LDEMLSRGLQADMYTYNALIRGMCREGMIE 3
+ EM+S G+ D TYN++I +CREGM++
Sbjct: 461 ILEMMSNGIDPDEITYNSMISCLCREGMVD 490
Score = 54.7 bits (130), Expect = 8e-06
Identities = 29/90 (32%), Positives = 43/90 (47%)
Frame = -1
Query: 272 PDVVTYNIMIGSLCSRXXXXXXXXXXXXXLEDNCKPTVITYTILIEATIVDGGINEAMKL 93
PD+ TYN +I +C +P VI+Y IL+ A + G E KL
Sbjct: 261 PDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKL 320
Query: 92 LDEMLSRGLQADMYTYNALIRGMCREGMIE 3
+ +M S ++ TY+ LI +CR+G IE
Sbjct: 321 MTKMFSEKCDPNVVTYSILITTLCRDGKIE 350