BLASTX nr result

ID: Bupleurum21_contig00018680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018680
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170627.1| PREDICTED: LOW QUALITY PROTEIN: nucleoporin ...   221   4e-56
ref|XP_004148101.1| PREDICTED: nucleoporin nup189-like [Cucumis ...   220   1e-55
ref|XP_002317654.1| predicted protein [Populus trichocarpa] gi|2...   218   4e-55
ref|XP_002298981.1| predicted protein [Populus trichocarpa] gi|2...   218   5e-55
ref|XP_002518957.1| transporter, putative [Ricinus communis] gi|...   216   1e-54

>ref|XP_004170627.1| PREDICTED: LOW QUALITY PROTEIN: nucleoporin NUP145-like [Cucumis
           sativus]
          Length = 362

 Score =  221 bits (564), Expect = 4e-56
 Identities = 102/149 (68%), Positives = 124/149 (83%), Gaps = 1/149 (0%)
 Frame = +1

Query: 1   LMPKVKHSEYFTEPRVEELALKESLEPGFCSHVKDFVVGHGRYGSIKFLGETDVRRLDIN 180
           LMPK++HS+Y+TEP+++ELA KE  EPGFC HVKDFVVG   YGSIKF GETDVRRLD+ 
Sbjct: 199 LMPKLRHSDYYTEPKIQELAAKERAEPGFCRHVKDFVVGRHGYGSIKFFGETDVRRLDLE 258

Query: 181 SHIVFNDHEVVVYMDESKKPPVGQGLNKAAEITLCNIKCIDKD-GNQYINGPKVDEYKQK 357
           S + FN+ EV+VY+DESKKPP GQGLNK AE+T+ NIKC+DK  G+QY  GPKV++YK+ 
Sbjct: 259 SIVQFNNREVIVYLDESKKPPCGQGLNKPAEVTILNIKCVDKQTGHQYTEGPKVEKYKEL 318

Query: 358 LIKFAADKGAEYVSYDPVQGEWKFRVEHF 444
           L K    +GAE+VSYDPV+GEWKFRVEHF
Sbjct: 319 LRKKTEAQGAEFVSYDPVKGEWKFRVEHF 347


>ref|XP_004148101.1| PREDICTED: nucleoporin nup189-like [Cucumis sativus]
          Length = 994

 Score =  220 bits (560), Expect = 1e-55
 Identities = 102/149 (68%), Positives = 123/149 (82%), Gaps = 1/149 (0%)
 Frame = +1

Query: 1    LMPKVKHSEYFTEPRVEELALKESLEPGFCSHVKDFVVGHGRYGSIKFLGETDVRRLDIN 180
            LMPK+ HS+Y+TEP+++ELA KE  EPGFC HVKDFVVG   YGSIKF GETDVRRLD+ 
Sbjct: 831  LMPKLLHSDYYTEPKIQELAAKERAEPGFCRHVKDFVVGRHGYGSIKFFGETDVRRLDLE 890

Query: 181  SHIVFNDHEVVVYMDESKKPPVGQGLNKAAEITLCNIKCIDKD-GNQYINGPKVDEYKQK 357
            S + FN+ EV+VY+DESKKPP GQGLNK AE+T+ NIKC+DK  G+QY  GPKV++YK+ 
Sbjct: 891  SIVQFNNREVIVYLDESKKPPCGQGLNKPAEVTILNIKCVDKQTGHQYTEGPKVEKYKEL 950

Query: 358  LIKFAADKGAEYVSYDPVQGEWKFRVEHF 444
            L K    +GAE+VSYDPV+GEWKFRVEHF
Sbjct: 951  LRKKTEAQGAEFVSYDPVKGEWKFRVEHF 979


>ref|XP_002317654.1| predicted protein [Populus trichocarpa] gi|222860719|gb|EEE98266.1|
            predicted protein [Populus trichocarpa]
          Length = 1007

 Score =  218 bits (555), Expect = 4e-55
 Identities = 101/149 (67%), Positives = 123/149 (82%), Gaps = 1/149 (0%)
 Frame = +1

Query: 1    LMPKVKHSEYFTEPRVEELALKESLEPGFCSHVKDFVVGHGRYGSIKFLGETDVRRLDIN 180
            LMPK++ S+YFTEPR++ELA KE  +PGFC HVKDFVVG   YGSIKF GETDVRRLD+ 
Sbjct: 839  LMPKLRRSDYFTEPRIQELAAKERAKPGFCRHVKDFVVGRHGYGSIKFSGETDVRRLDLE 898

Query: 181  SHIVFNDHEVVVYMDESKKPPVGQGLNKAAEITLCNIKCID-KDGNQYINGPKVDEYKQK 357
            S + FN+ EV+VYMD+SKKPPVGQGLNK AE+TL NIKC D K G Q+  GPK+++YK+ 
Sbjct: 899  SLVQFNNREVIVYMDDSKKPPVGQGLNKPAEVTLLNIKCFDKKTGRQFTEGPKIEKYKEM 958

Query: 358  LIKFAADKGAEYVSYDPVQGEWKFRVEHF 444
            L + A D+GAE+VSYDPV+GEWKF+V HF
Sbjct: 959  LKRKAEDQGAEFVSYDPVKGEWKFKVNHF 987


>ref|XP_002298981.1| predicted protein [Populus trichocarpa] gi|222846239|gb|EEE83786.1|
            predicted protein [Populus trichocarpa]
          Length = 942

 Score =  218 bits (554), Expect = 5e-55
 Identities = 102/149 (68%), Positives = 122/149 (81%), Gaps = 1/149 (0%)
 Frame = +1

Query: 1    LMPKVKHSEYFTEPRVEELALKESLEPGFCSHVKDFVVGHGRYGSIKFLGETDVRRLDIN 180
            LMPK++ S+YFTEPR++ELA KE   PGFC HVKDFVVG   YGSIKFL ETDVRRLD+ 
Sbjct: 763  LMPKLRRSDYFTEPRIQELAAKERARPGFCRHVKDFVVGRHGYGSIKFLVETDVRRLDLE 822

Query: 181  SHIVFNDHEVVVYMDESKKPPVGQGLNKAAEITLCNIKCID-KDGNQYINGPKVDEYKQK 357
            S + FN+ EV+VYMD+SKKPPVGQGLNK AE+TL NIKCID K G Q+  GPK++ YK+ 
Sbjct: 823  SLVQFNNREVIVYMDDSKKPPVGQGLNKPAEVTLLNIKCIDKKTGRQFTEGPKIERYKEM 882

Query: 358  LIKFAADKGAEYVSYDPVQGEWKFRVEHF 444
            L + A D+GAE+VSYDPV+GEWKF+V HF
Sbjct: 883  LKRKAEDQGAEFVSYDPVKGEWKFKVNHF 911


>ref|XP_002518957.1| transporter, putative [Ricinus communis] gi|223541944|gb|EEF43490.1|
            transporter, putative [Ricinus communis]
          Length = 957

 Score =  216 bits (551), Expect = 1e-54
 Identities = 101/149 (67%), Positives = 122/149 (81%), Gaps = 1/149 (0%)
 Frame = +1

Query: 1    LMPKVKHSEYFTEPRVEELALKESLEPGFCSHVKDFVVGHGRYGSIKFLGETDVRRLDIN 180
            LMPK++ S+Y+TEPR++ELA KE  EPGFC HVKDFVVG   YGSIKFLGETDVRRLD+ 
Sbjct: 782  LMPKLRRSDYYTEPRIQELAAKERAEPGFCRHVKDFVVGRHGYGSIKFLGETDVRRLDLE 841

Query: 181  SHIVFNDHEVVVYMDESKKPPVGQGLNKAAEITLCNIKCID-KDGNQYINGPKVDEYKQK 357
            S + FN+ EV+VY D+SKKPPVGQGLNK AE+TL NIKC D K G QY  G K+++YK+ 
Sbjct: 842  SLVQFNNREVIVYTDDSKKPPVGQGLNKPAEVTLLNIKCFDKKTGRQYTEGAKIEKYKEM 901

Query: 358  LIKFAADKGAEYVSYDPVQGEWKFRVEHF 444
            L + A ++GAE+VSYDPV+GEWKFRV HF
Sbjct: 902  LKRKAEEQGAEFVSYDPVKGEWKFRVNHF 930


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