BLASTX nr result

ID: Bupleurum21_contig00018633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018633
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512628.1| conserved hypothetical protein [Ricinus comm...    91   1e-16
ref|XP_002531759.1| conserved hypothetical protein [Ricinus comm...    81   8e-14
ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus c...    80   1e-13
ref|XP_002532287.1| conserved hypothetical protein [Ricinus comm...    80   1e-13
ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    78   9e-13

>ref|XP_002512628.1| conserved hypothetical protein [Ricinus communis]
           gi|223548589|gb|EEF50080.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 223

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 48/116 (41%), Positives = 67/116 (57%)
 Frame = +1

Query: 7   EVGIGMIARDEEGQLVLAMAKVVQGLVNLVTAEVMAIKEALSWIDQMKWQKVVLESDCLV 186
           ++G+  +  D  G  V  MA  V GL     AE +A+KEA+ W  QM++  VV ESD  +
Sbjct: 84  KIGMAAVVSDSNGTFVACMAHAVLGLFEPRLAEAVALKEAIRWAIQMRFSLVVFESDSKI 143

Query: 187 AVQVIRCKSPMRSPFGALVEHCRRYLTPMNNVSLYFVKRSANIVAHKLARESHIYS 354
           AV  IR  +   S FG +++ CR  L+   N  +YFVKR AN+VAH LA  S+ Y+
Sbjct: 144 AVDAIRSLAADWSEFGIIIDECRSLLSLGLNFQVYFVKRQANMVAHVLAMSSYSYA 199


>ref|XP_002531759.1| conserved hypothetical protein [Ricinus communis]
           gi|223528595|gb|EEF30615.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 163

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 46/114 (40%), Positives = 64/114 (56%)
 Frame = +1

Query: 4   EEVGIGMIARDEEGQLVLAMAKVVQGLVNLVTAEVMAIKEALSWIDQMKWQKVVLESDCL 183
           + +G+G + +D  G  V AMA    G      AE +AI+EALSW    +   VV E DCL
Sbjct: 49  DSMGVGCVMKDHAGLFVCAMAVSFAGAYIPEIAEGLAIQEALSWARDRQLLNVVFELDCL 108

Query: 184 VAVQVIRCKSPMRSPFGALVEHCRRYLTPMNNVSLYFVKRSANIVAHKLARESH 345
             V+ +  K   RS  G +++ C+   + ++N S  FVKRS N VAHKLAR S+
Sbjct: 109 HIVEALLRKGTDRSSLGLIIKDCKLLSSSISNCSFAFVKRSRNEVAHKLARVSN 162


>ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus communis]
           gi|223529168|gb|EEF31146.1| hypothetical protein
           RCOM_0494170 [Ricinus communis]
          Length = 329

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 44/124 (35%), Positives = 65/124 (52%)
 Frame = +1

Query: 13  GIGMIARDEEGQLVLAMAKVVQGLVNLVTAEVMAIKEALSWIDQMKWQKVVLESDCLVAV 192
           G GM+ RD  G  V+       GL N+  AE + ++EA+ W+  +    V+ E D  V V
Sbjct: 192 GFGMVIRDSAGSFVMGADGSSPGLFNVKLAEAIGLREAVQWVLSLGRSNVIFEYDAKVVV 251

Query: 193 QVIRCKSPMRSPFGALVEHCRRYLTPMNNVSLYFVKRSANIVAHKLARESHIYSGRRFDR 372
             +   +     FGA++  CR  L    N S+ F+++ AN+VAH LAR SH+  G  F+ 
Sbjct: 252 DAVLSGAADLFEFGAVIADCRLLLQHGCNYSVQFIRKQANLVAHSLARASHLQDG--FNM 309

Query: 373 RSVP 384
            SVP
Sbjct: 310 FSVP 313


>ref|XP_002532287.1| conserved hypothetical protein [Ricinus communis]
           gi|223528021|gb|EEF30102.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 346

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 43/119 (36%), Positives = 63/119 (52%)
 Frame = +1

Query: 7   EVGIGMIARDEEGQLVLAMAKVVQGLVNLVTAEVMAIKEALSWIDQMKWQKVVLESDCLV 186
           E  IGM+ RD     +   +   +GLV +  +E M ++EALSWI    +Q+V+ E DC  
Sbjct: 208 ETRIGMVLRDATRVFMCCASNCYEGLVQVRESETMRLREALSWIRGKWYQRVIFELDCQQ 267

Query: 187 AVQVIRCKSPMRSPFGALVEHCRRYLTPMNNVSLYFVKRSANIVAHKLARESHIYSGRR 363
            V  +         FG+L+  C   L   N+ S+ FVKR AN +A+ LAR  H ++G R
Sbjct: 268 IVHAVTNFLASVDEFGSLIRECAELLAENNSYSVIFVKRQANEIAYMLARAPHSHAGLR 326


>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 38/110 (34%), Positives = 61/110 (55%)
 Frame = +1

Query: 13  GIGMIARDEEGQLVLAMAKVVQGLVNLVTAEVMAIKEALSWIDQMKWQKVVLESDCLVAV 192
           G GM  RD+ G+ + A     +G      AE + +++A+ W+ Q++   V LE DC + V
Sbjct: 81  GTGMCVRDQRGRFLKAATNWYEGCPPPQEAEAVGLRDAILWLGQLELSNVQLELDCKLVV 140

Query: 193 QVIRCKSPMRSPFGALVEHCRRYLTPMNNVSLYFVKRSANIVAHKLARES 342
             I  K+  ++ FG++++ CR  L    N  + FV+R AN+VAH  AR S
Sbjct: 141 DSIYDKNNNQAEFGSIIDDCRSLLQQFTNFKISFVRRQANVVAHSFARVS 190


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