BLASTX nr result

ID: Bupleurum21_contig00018607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018607
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAU20773.1| late elongated hypocotyl [Castanea sativa]              59   4e-07
gb|AFA35964.1| late elongated hypocotyl [Nicotiana attenuata]          58   9e-07
ref|XP_003554788.1| PREDICTED: protein LHY [Glycine max]               57   2e-06
ref|XP_002320238.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
dbj|BAH09383.1| transcription factor LHY [Populus nigra] gi|2196...    57   2e-06

>gb|AAU20773.1| late elongated hypocotyl [Castanea sativa]
          Length = 768

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/39 (71%), Positives = 32/39 (82%)
 Frame = -1

Query: 433 GFKPYKRCSVEAKESRVACSINPEEAKAPKRMRLEGDAS 317
           GFKPYKRCSVEAKE+RVA +    E K PKR+RLEG+AS
Sbjct: 729 GFKPYKRCSVEAKENRVANASGQGEEKGPKRIRLEGEAS 767


>gb|AFA35964.1| late elongated hypocotyl [Nicotiana attenuata]
          Length = 767

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/39 (69%), Positives = 33/39 (84%)
 Frame = -1

Query: 433 GFKPYKRCSVEAKESRVACSINPEEAKAPKRMRLEGDAS 317
           GFKPYKRCS+EAK+SRVA S   +E K+ KR+RLEG+AS
Sbjct: 728 GFKPYKRCSLEAKDSRVASSSCQDEEKSAKRLRLEGEAS 766


>ref|XP_003554788.1| PREDICTED: protein LHY [Glycine max]
          Length = 749

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/39 (64%), Positives = 30/39 (76%)
 Frame = -1

Query: 433 GFKPYKRCSVEAKESRVACSINPEEAKAPKRMRLEGDAS 317
           GFKPYKRCSVEA E+R+  + N  E K PKR+RL G+AS
Sbjct: 710 GFKPYKRCSVEANENRIGTACNQGEEKGPKRIRLNGEAS 748


>ref|XP_002320238.1| predicted protein [Populus trichocarpa] gi|222861011|gb|EEE98553.1|
           predicted protein [Populus trichocarpa]
          Length = 750

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/39 (66%), Positives = 29/39 (74%)
 Frame = -1

Query: 433 GFKPYKRCSVEAKESRVACSINPEEAKAPKRMRLEGDAS 317
           GFKPYKRCS+EAKESR        E K PKR+RLEG+AS
Sbjct: 711 GFKPYKRCSLEAKESRTGTGSGQGEEKGPKRLRLEGEAS 749


>dbj|BAH09383.1| transcription factor LHY [Populus nigra]
           gi|219687749|dbj|BAH09385.1| PnLHY2 [Populus nigra]
          Length = 764

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/39 (66%), Positives = 29/39 (74%)
 Frame = -1

Query: 433 GFKPYKRCSVEAKESRVACSINPEEAKAPKRMRLEGDAS 317
           GFKPYKRCS+EAKESR        E K PKR+RLEG+AS
Sbjct: 725 GFKPYKRCSLEAKESRTGTGSGQGEEKGPKRLRLEGEAS 763


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