BLASTX nr result

ID: Bupleurum21_contig00018539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018539
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268521.1| PREDICTED: uncharacterized protein LOC100256...    62   6e-08
ref|XP_002513115.1| conserved hypothetical protein [Ricinus comm...    60   1e-07
ref|NP_194884.1| high chlorophyll fluorescence 153 protein [Arab...    60   2e-07
ref|XP_002862560.1| hypothetical protein ARALYDRAFT_497397 [Arab...    60   2e-07
ref|XP_002297772.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_002268521.1| PREDICTED: uncharacterized protein LOC100256905 [Vitis vinifera]
          Length = 133

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 26/40 (65%), Positives = 36/40 (90%)
 Frame = -1

Query: 301 YIFAFVFPLSLLVATVFTSIRIADKLDEDYLQELAVNQAI 182
           Y+FAFVFPLSLL  T+FTS+R+ DKL+ ++L+ELAVN+A+
Sbjct: 63  YVFAFVFPLSLLAVTIFTSLRVDDKLEREFLEELAVNEAM 102


>ref|XP_002513115.1| conserved hypothetical protein [Ricinus communis]
           gi|223548126|gb|EEF49618.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 93

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/36 (75%), Positives = 32/36 (88%)
 Frame = -1

Query: 301 YIFAFVFPLSLLVATVFTSIRIADKLDEDYLQELAV 194
           Y+FAFVFPLSLL+ T+ TSIRIADKLD DYL+E+ V
Sbjct: 58  YVFAFVFPLSLLIGTIITSIRIADKLDRDYLEEVRV 93


>ref|NP_194884.1| high chlorophyll fluorescence 153 protein [Arabidopsis thaliana]
           gi|11692862|gb|AAG40034.1|AF324683_1 AT4g31560
           [Arabidopsis thaliana]
           gi|11908100|gb|AAG41479.1|AF326897_1 unknown protein
           [Arabidopsis thaliana]
           gi|12642912|gb|AAK00398.1|AF339716_1 unknown protein
           [Arabidopsis thaliana]
           gi|13926337|gb|AAK49632.1|AF372916_1 AT4g31560/F3L17_130
           [Arabidopsis thaliana] gi|5262767|emb|CAB45915.1|
           putative protein [Arabidopsis thaliana]
           gi|7270059|emb|CAB79874.1| putative protein [Arabidopsis
           thaliana] gi|21592375|gb|AAM64326.1| unknown
           [Arabidopsis thaliana] gi|27363346|gb|AAO11592.1|
           At4g31560/F3L17_130 [Arabidopsis thaliana]
           gi|332660529|gb|AEE85929.1| high chlorophyll
           fluorescence 153 protein [Arabidopsis thaliana]
          Length = 137

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/40 (65%), Positives = 35/40 (87%)
 Frame = -1

Query: 301 YIFAFVFPLSLLVATVFTSIRIADKLDEDYLQELAVNQAI 182
           Y+ AF  P +L+ ATVFTSI+IADKLDED+L+++A+NQAI
Sbjct: 63  YLLAFAIPATLIAATVFTSIKIADKLDEDFLEDIALNQAI 102


>ref|XP_002862560.1| hypothetical protein ARALYDRAFT_497397 [Arabidopsis lyrata subsp.
           lyrata] gi|297308158|gb|EFH38818.1| hypothetical protein
           ARALYDRAFT_497397 [Arabidopsis lyrata subsp. lyrata]
          Length = 137

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/40 (65%), Positives = 35/40 (87%)
 Frame = -1

Query: 301 YIFAFVFPLSLLVATVFTSIRIADKLDEDYLQELAVNQAI 182
           Y+ AF  P +L+ ATVFTSI+IADKLDED+L+++A+NQAI
Sbjct: 63  YLLAFAIPATLIAATVFTSIKIADKLDEDFLEDIALNQAI 102


>ref|XP_002297772.1| predicted protein [Populus trichocarpa] gi|222845030|gb|EEE82577.1|
           predicted protein [Populus trichocarpa]
          Length = 162

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/33 (75%), Positives = 30/33 (90%)
 Frame = -1

Query: 301 YIFAFVFPLSLLVATVFTSIRIADKLDEDYLQE 203
           Y+ AF+ PLSLL AT+FTSIRIADKLD+DYL+E
Sbjct: 58  YVLAFLLPLSLLAATIFTSIRIADKLDQDYLEE 90


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