BLASTX nr result

ID: Bupleurum21_contig00018498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018498
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283742.1| PREDICTED: snurportin-1 [Vitis vinifera] gi|...   177   8e-43
emb|CAN62481.1| hypothetical protein VITISV_010809 [Vitis vinifera]   175   4e-42
ref|XP_002321701.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
ref|XP_002869701.1| hypothetical protein ARALYDRAFT_492350 [Arab...   155   3e-36
ref|XP_002511190.1| conserved hypothetical protein [Ricinus comm...   155   4e-36

>ref|XP_002283742.1| PREDICTED: snurportin-1 [Vitis vinifera]
           gi|297734416|emb|CBI15663.3| unnamed protein product
           [Vitis vinifera]
          Length = 419

 Score =  177 bits (449), Expect = 8e-43
 Identities = 88/135 (65%), Positives = 104/135 (77%)
 Frame = -2

Query: 406 MSPHDVRRPFKRPVISDQQKRRDLTLLRQIQNRRDAQHQARCLASTVVSLPNQNSETVPE 227
           M+PH+VRRPFKRP ISDQQKRR+L+LLRQ QNRRDAQH ARCLASTVVSL   N E + E
Sbjct: 1   MAPHEVRRPFKRPAISDQQKRRELSLLRQAQNRRDAQHHARCLASTVVSLQAPNPEPISE 60

Query: 226 QFELVPEPEINEADEAQFRESQAPSSSRNLDIRHASKLRGPEVRMWFAKQLMLPEWMIDV 47
             E+  EP +         ES++ S  R++D+R ASKL+G E R WFA+QLMLPEWMIDV
Sbjct: 61  P-EIADEPSV---------ESESQSIPRDIDVRQASKLKGYEARRWFARQLMLPEWMIDV 110

Query: 46  PDRLNHDWYVFARPS 2
           PDRL+HDWYV ARP+
Sbjct: 111 PDRLSHDWYVLARPT 125


>emb|CAN62481.1| hypothetical protein VITISV_010809 [Vitis vinifera]
          Length = 266

 Score =  175 bits (443), Expect = 4e-42
 Identities = 87/135 (64%), Positives = 103/135 (76%)
 Frame = -2

Query: 406 MSPHDVRRPFKRPVISDQQKRRDLTLLRQIQNRRDAQHQARCLASTVVSLPNQNSETVPE 227
           M+PH+VRRPFKRP ISDQQKRR+L+LLRQ QNRRDAQH ARCLASTVVSL   N E + E
Sbjct: 1   MAPHEVRRPFKRPAISDQQKRRELSLLRQAQNRRDAQHHARCLASTVVSLQAPNPEPISE 60

Query: 226 QFELVPEPEINEADEAQFRESQAPSSSRNLDIRHASKLRGPEVRMWFAKQLMLPEWMIDV 47
             E+  EP +         ES++ S   ++D+R ASKL+G E R WFA+QLMLPEWMIDV
Sbjct: 61  P-EIADEPSV---------ESESQSIPXDIDVRQASKLKGYEARRWFARQLMLPEWMIDV 110

Query: 46  PDRLNHDWYVFARPS 2
           PDRL+HDWYV ARP+
Sbjct: 111 PDRLSHDWYVLARPT 125


>ref|XP_002321701.1| predicted protein [Populus trichocarpa] gi|222868697|gb|EEF05828.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score =  162 bits (409), Expect = 3e-38
 Identities = 81/133 (60%), Positives = 99/133 (74%)
 Frame = -2

Query: 400 PHDVRRPFKRPVISDQQKRRDLTLLRQIQNRRDAQHQARCLASTVVSLPNQNSETVPEQF 221
           P D RRPFKR  ISDQQ+RRD++L RQ Q+RRDAQHQARCLASTV+SL +Q +       
Sbjct: 4   PQDTRRPFKRLAISDQQRRRDISLQRQAQSRRDAQHQARCLASTVLSLQHQTT------- 56

Query: 220 ELVPEPEINEADEAQFRESQAPSSSRNLDIRHASKLRGPEVRMWFAKQLMLPEWMIDVPD 41
              PEPE N   E      ++ +SS++LD+RHA++L+G E R WFAKQLML EWMIDVPD
Sbjct: 57  ---PEPESNIELELVPESEESGASSQDLDVRHAARLKGAEARKWFAKQLMLHEWMIDVPD 113

Query: 40  RLNHDWYVFARPS 2
           RL+ DWYVFARP+
Sbjct: 114 RLSDDWYVFARPA 126


>ref|XP_002869701.1| hypothetical protein ARALYDRAFT_492350 [Arabidopsis lyrata subsp.
           lyrata] gi|297315537|gb|EFH45960.1| hypothetical protein
           ARALYDRAFT_492350 [Arabidopsis lyrata subsp. lyrata]
          Length = 416

 Score =  155 bits (392), Expect = 3e-36
 Identities = 78/135 (57%), Positives = 99/135 (73%)
 Frame = -2

Query: 406 MSPHDVRRPFKRPVISDQQKRRDLTLLRQIQNRRDAQHQARCLASTVVSLPNQNSETVPE 227
           M+PH++RRPFKR  ISDQQKRR+L+LLRQ Q+R DAQ +AR LAS+V+SL + + +  PE
Sbjct: 1   MAPHEIRRPFKRRPISDQQKRRELSLLRQTQHRSDAQQRARNLASSVISLQSSSPDVDPE 60

Query: 226 QFELVPEPEINEADEAQFRESQAPSSSRNLDIRHASKLRGPEVRMWFAKQLMLPEWMIDV 47
              ++ E E+NE  E +         S + D+R AS+LRGPE R WFAKQLMLPEWMIDV
Sbjct: 61  ---ILSEAELNEGTELE---------SSSFDVRQASRLRGPEARKWFAKQLMLPEWMIDV 108

Query: 46  PDRLNHDWYVFARPS 2
           PD L+ DWYV ARP+
Sbjct: 109 PDNLSQDWYVLARPA 123


>ref|XP_002511190.1| conserved hypothetical protein [Ricinus communis]
           gi|223550305|gb|EEF51792.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 415

 Score =  155 bits (391), Expect = 4e-36
 Identities = 80/135 (59%), Positives = 96/135 (71%)
 Frame = -2

Query: 406 MSPHDVRRPFKRPVISDQQKRRDLTLLRQIQNRRDAQHQARCLASTVVSLPNQNSETVPE 227
           M+P+DVRRPFKR  ISDQQ+RRDLTL RQ Q+RRDAQ QARC+A+TV+SL  QN++  P 
Sbjct: 1   MAPNDVRRPFKRAAISDQQRRRDLTLQRQAQSRRDAQQQARCVATTVLSLQYQNTQPEP- 59

Query: 226 QFELVPEPEINEADEAQFRESQAPSSSRNLDIRHASKLRGPEVRMWFAKQLMLPEWMIDV 47
             EL+P+           +E      S  LD+R A K++G E R WFAKQLMLPEWMIDV
Sbjct: 60  --ELLPD-----------QEEDGGGPSIELDVRQAYKVKGAEARKWFAKQLMLPEWMIDV 106

Query: 46  PDRLNHDWYVFARPS 2
           PD L  DWYVFARP+
Sbjct: 107 PDSLAQDWYVFARPA 121


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