BLASTX nr result

ID: Bupleurum21_contig00018483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018483
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533753.1| transcription factor, putative [Ricinus comm...   131   6e-29
ref|XP_002299867.1| GRAS family transcription factor [Populus tr...   130   1e-28
gb|AAF79548.1|AC022464_6 F22G5.9 [Arabidopsis thaliana]               129   3e-28
ref|NP_172233.1| scarecrow-like protein 14 [Arabidopsis thaliana...   129   3e-28
dbj|BAH19804.1| AT1G07530 [Arabidopsis thaliana]                      129   3e-28

>ref|XP_002533753.1| transcription factor, putative [Ricinus communis]
           gi|223526341|gb|EEF28640.1| transcription factor,
           putative [Ricinus communis]
          Length = 764

 Score =  131 bits (329), Expect = 6e-29
 Identities = 76/144 (52%), Positives = 93/144 (64%), Gaps = 7/144 (4%)
 Frame = -3

Query: 412 RQDSIIEDERSRKQSAVYEEEDELSDLFDKVLLCG------PSCDKEEPIEF-SPISHQQ 254
           R+D   ++ERS KQSAVY +E EL+++FDKVL+C       P C   +  +  S  + QQ
Sbjct: 306 REDDDFDEERSNKQSAVYVDETELAEMFDKVLVCTGGGCRPPGCILSDSSQSGSNKALQQ 365

Query: 253 NGLTXXXXXXXXXXXKADTNSEAVDLRTLLISCAQSVATEDRRTANEQLKIIRQHSSASG 74
           NG T           +     E VDLRTLLI CAQ+V+++DRRTANE LK IRQHSS  G
Sbjct: 366 NGQTNGSNGGKARAKRQGNKKEVVDLRTLLILCAQAVSSDDRRTANEILKQIRQHSSPFG 425

Query: 73  DASQRLADIFANGLEARMAGTGTQ 2
           D SQRLA  FANGLEAR+AGTG Q
Sbjct: 426 DGSQRLAHCFANGLEARLAGTGAQ 449


>ref|XP_002299867.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222847125|gb|EEE84672.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 757

 Score =  130 bits (327), Expect = 1e-28
 Identities = 75/144 (52%), Positives = 92/144 (63%), Gaps = 7/144 (4%)
 Frame = -3

Query: 412 RQDSIIEDERSRKQSAVYEEEDELSDLFDKVLLCGPSC-------DKEEPIEFSPISHQQ 254
           R+D   E+ERS KQSAV+ +E ELS++FD ++  G  C       D+ E  E S  + +Q
Sbjct: 300 REDEDFEEERSNKQSAVHVDESELSEMFDMLVGVGEGCRPPGCILDQAEQCESSK-TVRQ 358

Query: 253 NGLTXXXXXXXXXXXKADTNSEAVDLRTLLISCAQSVATEDRRTANEQLKIIRQHSSASG 74
           NG T               N E VDLRTLL+ CAQ+V++ DRR ANE LK IRQHSS  G
Sbjct: 359 NGQTKGSSGSKTRAKIQGNNKEVVDLRTLLVLCAQAVSSNDRRAANELLKQIRQHSSPLG 418

Query: 73  DASQRLADIFANGLEARMAGTGTQ 2
           D SQRLA+ FANGLEAR+AGTGTQ
Sbjct: 419 DGSQRLANCFANGLEARLAGTGTQ 442


>gb|AAF79548.1|AC022464_6 F22G5.9 [Arabidopsis thaliana]
          Length = 1502

 Score =  129 bits (323), Expect = 3e-28
 Identities = 70/142 (49%), Positives = 91/142 (64%), Gaps = 6/142 (4%)
 Frame = -3

Query: 409 QDSIIEDERSRKQSAVYEEEDELSDLFDKVLLCGPS-----CDKEEPIEFSPI-SHQQNG 248
           +D    +ERS KQSAVY EE ELS++FDK+L+CGP       ++  P E + + + Q NG
Sbjct: 310 EDEDFVEERSNKQSAVYVEESELSEMFDKILVCGPGKPVCILNQNFPTESAKVVTAQSNG 369

Query: 247 LTXXXXXXXXXXXKADTNSEAVDLRTLLISCAQSVATEDRRTANEQLKIIRQHSSASGDA 68
                          D+  E  DLRTLL+ CAQ+V+ +DRRTANE L+ IR+HSS  G+ 
Sbjct: 370 AKIRGKKSTSTSHSNDSKKETADLRTLLVLCAQAVSVDDRRTANEMLRQIREHSSPLGNG 429

Query: 67  SQRLADIFANGLEARMAGTGTQ 2
           S+RLA  FAN LEAR+AGTGTQ
Sbjct: 430 SERLAHYFANSLEARLAGTGTQ 451



 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 61/136 (44%), Positives = 78/136 (57%), Gaps = 1/136 (0%)
 Frame = -3

Query: 409  QDSIIEDERSRKQSAVYEEEDELSDLFDKVLLCGPSCDKEEPIEFSPISHQQNGLTXXXX 230
            +D + E  R  KQ AV EE+ +L+++FDKVLL    CD +       I   +NG +    
Sbjct: 1055 EDDLEEARRRSKQFAVNEEDGKLTEMFDKVLLLDGECDPQI------IEDGENGSSKALV 1108

Query: 229  XXXXXXXKADTNSEAVDLRTLLISCAQSVATEDRRTANEQLKIIRQHSSASGDASQRLAD 50
                    A   S AVD RTLL  CAQSV+  D+ TA++ L+ IR+  S  GDASQRLA 
Sbjct: 1109 KKGR----AKKKSRAVDFRTLLTLCAQSVSAGDKITADDLLRQIRKQCSPVGDASQRLAH 1164

Query: 49   IFANGLEARMAG-TGT 5
             FAN LEAR+ G TGT
Sbjct: 1165 FFANALEARLEGSTGT 1180


>ref|NP_172233.1| scarecrow-like protein 14 [Arabidopsis thaliana]
           gi|206558299|sp|Q9XE58.2|SCL14_ARATH RecName:
           Full=Scarecrow-like protein 14; Short=AtSCL14; AltName:
           Full=GRAS family protein 2; Short=AtGRAS-2
           gi|222423057|dbj|BAH19510.1| AT1G07530 [Arabidopsis
           thaliana] gi|332190018|gb|AEE28139.1| scarecrow-like
           protein 14 [Arabidopsis thaliana]
          Length = 769

 Score =  129 bits (323), Expect = 3e-28
 Identities = 70/142 (49%), Positives = 91/142 (64%), Gaps = 6/142 (4%)
 Frame = -3

Query: 409 QDSIIEDERSRKQSAVYEEEDELSDLFDKVLLCGPS-----CDKEEPIEFSPI-SHQQNG 248
           +D    +ERS KQSAVY EE ELS++FDK+L+CGP       ++  P E + + + Q NG
Sbjct: 310 EDEDFVEERSNKQSAVYVEESELSEMFDKILVCGPGKPVCILNQNFPTESAKVVTAQSNG 369

Query: 247 LTXXXXXXXXXXXKADTNSEAVDLRTLLISCAQSVATEDRRTANEQLKIIRQHSSASGDA 68
                          D+  E  DLRTLL+ CAQ+V+ +DRRTANE L+ IR+HSS  G+ 
Sbjct: 370 AKIRGKKSTSTSHSNDSKKETADLRTLLVLCAQAVSVDDRRTANEMLRQIREHSSPLGNG 429

Query: 67  SQRLADIFANGLEARMAGTGTQ 2
           S+RLA  FAN LEAR+AGTGTQ
Sbjct: 430 SERLAHYFANSLEARLAGTGTQ 451


>dbj|BAH19804.1| AT1G07530 [Arabidopsis thaliana]
          Length = 546

 Score =  129 bits (323), Expect = 3e-28
 Identities = 70/142 (49%), Positives = 91/142 (64%), Gaps = 6/142 (4%)
 Frame = -3

Query: 409 QDSIIEDERSRKQSAVYEEEDELSDLFDKVLLCGPS-----CDKEEPIEFSPI-SHQQNG 248
           +D    +ERS KQSAVY EE ELS++FDK+L+CGP       ++  P E + + + Q NG
Sbjct: 87  EDEDFVEERSNKQSAVYVEESELSEMFDKILVCGPGKPVCILNQNFPTESAKVVTAQSNG 146

Query: 247 LTXXXXXXXXXXXKADTNSEAVDLRTLLISCAQSVATEDRRTANEQLKIIRQHSSASGDA 68
                          D+  E  DLRTLL+ CAQ+V+ +DRRTANE L+ IR+HSS  G+ 
Sbjct: 147 AKIRGKKSTSTSHSNDSKKETADLRTLLVLCAQAVSVDDRRTANEMLRQIREHSSPLGNG 206

Query: 67  SQRLADIFANGLEARMAGTGTQ 2
           S+RLA  FAN LEAR+AGTGTQ
Sbjct: 207 SERLAHYFANSLEARLAGTGTQ 228


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