BLASTX nr result

ID: Bupleurum21_contig00018479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018479
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA55791.1| TPA: putative regulator of chromosome condensati...   175   3e-42
ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250...   173   1e-41
ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207...   173   1e-41
ref|NP_001190338.1| regulator of chromosome condensation-like pr...   173   1e-41
ref|XP_002873947.1| hypothetical protein ARALYDRAFT_488831 [Arab...   173   1e-41

>tpg|DAA55791.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 964

 Score =  175 bits (444), Expect = 3e-42
 Identities = 82/120 (68%), Positives = 98/120 (81%)
 Frame = +3

Query: 3   ALITSAGQLYTFGDGTFGALGHGDRNSVRIPREVETLRDCRTIRVSCGVWHTAAVVEVEK 182
           AL+TSAGQL+TFGDG+FG LGHGDR S+ +PREVE+L+  RT+R +CGVWHTAAVVEV  
Sbjct: 303 ALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAVVEVMS 362

Query: 183 ESSNSPQLEGCIPGKLFTWGDGDKGQLGHGDKEPRLAPESVAALVDVNFSKVACGNNLTV 362
            +SNS     C  GK+FTWGDGDKG+LGHGDKEP+L P  VAALV+ NF +VACG+ LTV
Sbjct: 363 VNSNS---SNCSSGKIFTWGDGDKGRLGHGDKEPKLVPTCVAALVEPNFCQVACGHCLTV 419



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 49/153 (32%), Positives = 67/153 (43%), Gaps = 38/153 (24%)
 Frame = +3

Query: 15  SAGQLYTFGDGTFGALGHGDRNSVRIPREVETLRDCRTIRVSCGVWHTAAVVE------- 173
           S+G+++T+GDG  G LGHGD+    +P  V  L +    +V+CG   T A+         
Sbjct: 371 SSGKIFTWGDGDKGRLGHGDKEPKLVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTM 430

Query: 174 ---VEKESSNSPQLEGCIP----GKLF------------------------TWGDGDKGQ 260
              V  +  N+ Q +G +P    GKL+                        TWG G  G+
Sbjct: 431 GSAVYGQLGNA-QADGMLPVRVEGKLYKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGR 489

Query: 261 LGHGDKEPRLAPESVAALVDVNFSKVACGNNLT 359
           LGHGD E +  P  V AL D     V CG N T
Sbjct: 490 LGHGDTEDKNTPTLVEALKDKQVRNVVCGINFT 522


>ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera]
          Length = 1047

 Score =  173 bits (439), Expect = 1e-41
 Identities = 82/120 (68%), Positives = 99/120 (82%)
 Frame = +3

Query: 3   ALITSAGQLYTFGDGTFGALGHGDRNSVRIPREVETLRDCRTIRVSCGVWHTAAVVEVEK 182
           A++TSAGQL+TFGDGTFGALGHGD +S+ IPREVE LR  RT+RV+CGVWHTAAVVE+  
Sbjct: 412 AVVTSAGQLFTFGDGTFGALGHGDHSSMSIPREVEALRGQRTMRVACGVWHTAAVVELMI 471

Query: 183 ESSNSPQLEGCIPGKLFTWGDGDKGQLGHGDKEPRLAPESVAALVDVNFSKVACGNNLTV 362
            SS+         GKLFTWGDGDKG+LGHGDKEPRL P+SV AL++ +F +VACG+NL+V
Sbjct: 472 ASSSFESSGSSSSGKLFTWGDGDKGRLGHGDKEPRLVPQSVTALINESFCQVACGHNLSV 531



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 48/153 (31%), Positives = 67/153 (43%), Gaps = 37/153 (24%)
 Frame = +3

Query: 12  TSAGQLYTFGDGTFGALGHGDRNSVRIPREVETLRDCRTIRVSCGVWHTAAVVEVEKESS 191
           +S+G+L+T+GDG  G LGHGD+    +P+ V  L +    +V+CG   + A+    +  +
Sbjct: 482 SSSGKLFTWGDGDKGRLGHGDKEPRLVPQSVTALINESFCQVACGHNLSVALTTSGRVYT 541

Query: 192 ---------NSPQLEGCIP----GKL------------------------FTWGDGDKGQ 260
                     SP  +G IP    GK+                        +TWG G  GQ
Sbjct: 542 MGSAVYGQLGSPVADGKIPTLVEGKIANSFVEEVACGSYHVAVLTSKTEVYTWGKGTNGQ 601

Query: 261 LGHGDKEPRLAPESVAALVDVNFSKVACGNNLT 359
           LGHGD + R  P  V  L D     V CG N T
Sbjct: 602 LGHGDNDHRNTPTLVDFLKDKQVKNVVCGLNFT 634



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
 Frame = +3

Query: 6   LITSAGQLYTFGDGTFGALGHGDRNSVRIPREVETLRDCRTIRVSCGVWHTAAVVEVEKE 185
           L+T  G+++++G+     LGHG    V  P+ ++ L       V+CG +H+ AV      
Sbjct: 306 LVTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHSCAVT----- 360

Query: 186 SSNSPQLEGCIPGKLFTWGDG--DKGQLGHGDKEPRLAPESVAALVD-VNFSKVACG 347
                     + G L+TWGDG  + G LGHG +     P+ V+  ++ ++ S VACG
Sbjct: 361 ----------LSGDLYTWGDGTHNSGLLGHGSEASHWIPKKVSGPMEGMHVSYVACG 407


>ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207486 [Cucumis sativus]
           gi|449480975|ref|XP_004156044.1| PREDICTED:
           uncharacterized LOC101207486 [Cucumis sativus]
          Length = 1104

 Score =  173 bits (438), Expect = 1e-41
 Identities = 82/120 (68%), Positives = 98/120 (81%)
 Frame = +3

Query: 3   ALITSAGQLYTFGDGTFGALGHGDRNSVRIPREVETLRDCRTIRVSCGVWHTAAVVEVEK 182
           A++TSAGQL+TFGDGTFG LGHGDR SV +PREVE+L+  RT+R +CGVWHTAAVVEV  
Sbjct: 428 AVVTSAGQLFTFGDGTFGVLGHGDRGSVTMPREVESLKGLRTVRAACGVWHTAAVVEVMV 487

Query: 183 ESSNSPQLEGCIPGKLFTWGDGDKGQLGHGDKEPRLAPESVAALVDVNFSKVACGNNLTV 362
            SS+S     C  GKLFTWGDGDKG+LGHGDKE +L P  VAALVD NF +V+CG+++TV
Sbjct: 488 GSSSS---SNCSSGKLFTWGDGDKGRLGHGDKETKLVPTCVAALVDPNFCRVSCGHSMTV 544



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 53/152 (34%), Positives = 69/152 (45%), Gaps = 37/152 (24%)
 Frame = +3

Query: 15  SAGQLYTFGDGTFGALGHGDRNSVRIPREVETLRDCRTIRVSCGVWHTAAVV---EVEKE 185
           S+G+L+T+GDG  G LGHGD+ +  +P  V  L D    RVSCG   T A+     V   
Sbjct: 496 SSGKLFTWGDGDKGRLGHGDKETKLVPTCVAALVDPNFCRVSCGHSMTVALTTSGHVYTM 555

Query: 186 SS------NSPQLEGCIP----GKL------------------------FTWGDGDKGQL 263
            S       +P  +G +P    GKL                        +TWG G  G+L
Sbjct: 556 GSPVYGQLGNPHADGKVPVRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRL 615

Query: 264 GHGDKEPRLAPESVAALVDVNFSKVACGNNLT 359
           GHGD + R +P  V AL D     +ACG N T
Sbjct: 616 GHGDTDDRNSPTLVEALKDKQVKSIACGTNFT 647



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
 Frame = +3

Query: 3   ALITSAGQLYTFGDGTFGALGHGDRNSVRIPREVETLRDCRTIRVSCGVWHTAAVVEVEK 182
           AL+T  G+++T+G+ + G LGHG  + V  P+ V+ L +     VSCG +HT AV     
Sbjct: 321 ALVTKQGEIFTWGEESGGRLGHGVDSDVLQPKLVDALGNTNIELVSCGEYHTCAVT---- 376

Query: 183 ESSNSPQLEGCIPGKLFTWGDG--DKGQLGHGDKEPRLAPESV-AALVDVNFSKVACG 347
                      + G L+TWGDG  + G LGHG++     P+ +   L  ++ S +ACG
Sbjct: 377 -----------LSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKINGPLEGIHVSSIACG 423


>ref|NP_001190338.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
           gi|332005321|gb|AED92704.1| regulator of chromosome
           condensation-like protein with FYVE zinc finger domain
           [Arabidopsis thaliana]
          Length = 1139

 Score =  173 bits (438), Expect = 1e-41
 Identities = 83/120 (69%), Positives = 98/120 (81%)
 Frame = +3

Query: 3   ALITSAGQLYTFGDGTFGALGHGDRNSVRIPREVETLRDCRTIRVSCGVWHTAAVVEVEK 182
           A++TSAGQL+TFGDGTFG LGHGDR SV IPREV++L+  RT+R +CGVWHTAAVVEV  
Sbjct: 464 AVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMV 523

Query: 183 ESSNSPQLEGCIPGKLFTWGDGDKGQLGHGDKEPRLAPESVAALVDVNFSKVACGNNLTV 362
            SS+S     C  GKLFTWGDGDK +LGHGDKEP+L P  VAALV+ NF +VACG++LTV
Sbjct: 524 GSSSS---SNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTV 580



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 37/115 (32%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
 Frame = +3

Query: 6   LITSAGQLYTFGDGTFGALGHGDRNSVRIPREVETLRDCRTIRVSCGVWHTAAVVEVEKE 185
           L+T  G+ +++G+ + G LGHG  ++V+ P+ ++ L       V+CG +H+ AV      
Sbjct: 360 LVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYHSCAVT----- 414

Query: 186 SSNSPQLEGCIPGKLFTWGDGDKGQLGHGDKEPRLAPESVAALVD-VNFSKVACG 347
                     + G L+TWG GD G LGHG++     P+ V  L++ ++ S +ACG
Sbjct: 415 ----------LSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACG 459



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 48/152 (31%), Positives = 68/152 (44%), Gaps = 37/152 (24%)
 Frame = +3

Query: 15  SAGQLYTFGDGTFGALGHGDRNSVRIPREVETLRDCRTIRVSCGVWHTAAVV---EVEKE 185
           S+G+L+T+GDG    LGHGD+    +P  V  L +    +V+CG   T A+     V   
Sbjct: 532 SSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTM 591

Query: 186 SS------NSPQLEGCIP----GKL------------------------FTWGDGDKGQL 263
            S       +P  +G +P    GKL                        +TWG G  G+L
Sbjct: 592 GSPVYGQLGNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRL 651

Query: 264 GHGDKEPRLAPESVAALVDVNFSKVACGNNLT 359
           GHGD + R +P  V +L D     +ACG+N T
Sbjct: 652 GHGDADDRNSPTLVESLKDKQVKSIACGSNFT 683


>ref|XP_002873947.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata] gi|297319784|gb|EFH50206.1| hypothetical protein
           ARALYDRAFT_488831 [Arabidopsis lyrata subsp. lyrata]
          Length = 1100

 Score =  173 bits (438), Expect = 1e-41
 Identities = 83/120 (69%), Positives = 98/120 (81%)
 Frame = +3

Query: 3   ALITSAGQLYTFGDGTFGALGHGDRNSVRIPREVETLRDCRTIRVSCGVWHTAAVVEVEK 182
           A++TSAGQL+TFGDGTFG LGHGDR SV IPREV++L+  RT+R +CGVWHTAAVVEV  
Sbjct: 425 AVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMV 484

Query: 183 ESSNSPQLEGCIPGKLFTWGDGDKGQLGHGDKEPRLAPESVAALVDVNFSKVACGNNLTV 362
            SS+S     C  GKLFTWGDGDK +LGHGDKEP+L P  VAALV+ NF +VACG++LTV
Sbjct: 485 GSSSS---SNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTV 541



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/115 (32%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
 Frame = +3

Query: 6   LITSAGQLYTFGDGTFGALGHGDRNSVRIPREVETLRDCRTIRVSCGVWHTAAVVEVEKE 185
           L+T  G+ +++G+ + G LGHG  ++V+ P+ ++ L       V+CG +H+ AV      
Sbjct: 321 LVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALSTTNIELVACGEYHSCAVT----- 375

Query: 186 SSNSPQLEGCIPGKLFTWGDGDKGQLGHGDKEPRLAPESVAALVD-VNFSKVACG 347
                     + G L+TWG GD G LGHG++     P+ V  L++ ++ S +ACG
Sbjct: 376 ----------LSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACG 420



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 48/152 (31%), Positives = 68/152 (44%), Gaps = 37/152 (24%)
 Frame = +3

Query: 15  SAGQLYTFGDGTFGALGHGDRNSVRIPREVETLRDCRTIRVSCGVWHTAAVV---EVEKE 185
           S+G+L+T+GDG    LGHGD+    +P  V  L +    +V+CG   T A+     V   
Sbjct: 493 SSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTM 552

Query: 186 SS------NSPQLEGCIP----GKL------------------------FTWGDGDKGQL 263
            S       +P  +G +P    GKL                        +TWG G  G+L
Sbjct: 553 GSPVYGQLGNPHADGKVPTRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRL 612

Query: 264 GHGDKEPRLAPESVAALVDVNFSKVACGNNLT 359
           GHGD + R +P  V +L D     +ACG+N T
Sbjct: 613 GHGDADDRNSPTLVESLKDKQVKSIACGSNFT 644


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