BLASTX nr result

ID: Bupleurum21_contig00018475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018475
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523063.1| multidrug resistance-associated protein 2, 6...    47   4e-07
ref|XP_003628563.1| Multidrug resistance protein ABC transporter...    49   1e-06
emb|CAD59596.1| MRP-like ABC transporter [Oryza sativa Japonica ...    40   6e-06
ref|XP_003533361.1| PREDICTED: ABC transporter C family member 4...    47   6e-06
gb|EAZ11845.1| hypothetical protein OsJ_01721 [Oryza sativa Japo...    40   6e-06

>ref|XP_002523063.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223537625|gb|EEF39248.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1506

 Score = 47.4 bits (111), Expect(2) = 4e-07
 Identities = 22/39 (56%), Positives = 29/39 (74%)
 Frame = -1

Query: 121  FLTYLVVKASQSYFRKILHIIVHAPMSYIDTTPS*RILS 5
            F+  + +K +Q +F  ILH I+HAPMS+ DTTPS RILS
Sbjct: 1006 FVNLMGLKTAQIFFMGILHSILHAPMSFFDTTPSGRILS 1044



 Score = 31.6 bits (70), Expect(2) = 4e-07
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
 Frame = -3

Query: 251  STTMRIDYWLVHEASTDQT--FVPTVLITLYAIFGHLSVFVLF--R*FFNIFGRK 99
            ++ M  DYWL +E S ++   F P++ I++YA+    S+ +L     F N+ G K
Sbjct: 959  ASLMAADYWLAYETSEERASIFDPSLFISVYAVITAASLVLLTMRALFVNLMGLK 1013


>ref|XP_003628563.1| Multidrug resistance protein ABC transporter family [Medicago
            truncatula] gi|355522585|gb|AET03039.1| Multidrug
            resistance protein ABC transporter family [Medicago
            truncatula]
          Length = 1498

 Score = 49.3 bits (116), Expect(2) = 1e-06
 Identities = 24/37 (64%), Positives = 29/37 (78%)
 Frame = -1

Query: 115  TYLVVKASQSYFRKILHIIVHAPMSYIDTTPS*RILS 5
            TYL +K SQS+F  +L  I+HAPMS+ DTTPS RILS
Sbjct: 1002 TYLGLKTSQSFFIGMLQCILHAPMSFFDTTPSGRILS 1038



 Score = 28.1 bits (61), Expect(2) = 1e-06
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = -3

Query: 233  DYWLVHEASTDQTFVPTVLITLYAIFGHLSVFVL 132
            DYWL    + D + + +  IT+YA+   ++  V+
Sbjct: 961  DYWLAFATADDSSILSSTFITVYAVIAVVACIVV 994


>emb|CAD59596.1| MRP-like ABC transporter [Oryza sativa Japonica Group]
            gi|53792125|dbj|BAD52758.1| putative AtMRP4 [Oryza sativa
            Japonica Group] gi|215768961|dbj|BAH01190.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 1527

 Score = 40.4 bits (93), Expect(2) = 6e-06
 Identities = 17/27 (62%), Positives = 23/27 (85%)
 Frame = -1

Query: 85   YFRKILHIIVHAPMSYIDTTPS*RILS 5
            +FR++L  I+HAPMS+ DTTPS RIL+
Sbjct: 1039 FFRQVLSTILHAPMSFFDTTPSGRILT 1065



 Score = 34.3 bits (77), Expect(2) = 6e-06
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = -3

Query: 248  TTMRIDYWLVHEASTDQTFVPTVLITLYAIFGHLSVFVL 132
            +TM  DYWL ++ S D  F P + I +YAI   +SV ++
Sbjct: 984  STMAADYWLAYQTSGD-AFRPALFIKVYAIIAAVSVVIV 1021


>ref|XP_003533361.1| PREDICTED: ABC transporter C family member 4-like [Glycine max]
          Length = 1506

 Score = 47.4 bits (111), Expect(2) = 6e-06
 Identities = 23/37 (62%), Positives = 28/37 (75%)
 Frame = -1

Query: 115  TYLVVKASQSYFRKILHIIVHAPMSYIDTTPS*RILS 5
            TY  +K SQS+F  +L  I+HAPMS+ DTTPS RILS
Sbjct: 1006 TYWGLKTSQSFFSGMLESILHAPMSFFDTTPSGRILS 1042



 Score = 27.3 bits (59), Expect(2) = 6e-06
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -3

Query: 233  DYWLVHEASTDQTFVPTVLITLYA-IFGHLSVFVLFR 126
            DYWL    + D  F P+  I +YA I G +   V+ R
Sbjct: 965  DYWLAIGTAEDSAFPPSTFIIVYACIAGLVCTVVMIR 1001


>gb|EAZ11845.1| hypothetical protein OsJ_01721 [Oryza sativa Japonica Group]
          Length = 798

 Score = 40.4 bits (93), Expect(2) = 6e-06
 Identities = 17/27 (62%), Positives = 23/27 (85%)
 Frame = -1

Query: 85  YFRKILHIIVHAPMSYIDTTPS*RILS 5
           +FR++L  I+HAPMS+ DTTPS RIL+
Sbjct: 310 FFRQVLSTILHAPMSFFDTTPSGRILT 336



 Score = 34.3 bits (77), Expect(2) = 6e-06
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = -3

Query: 248 TTMRIDYWLVHEASTDQTFVPTVLITLYAIFGHLSVFVL 132
           +TM  DYWL ++ S D  F P + I +YAI   +SV ++
Sbjct: 255 STMAADYWLAYQTSGD-AFRPALFIKVYAIIAAVSVVIV 292


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