BLASTX nr result

ID: Bupleurum21_contig00018465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018465
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310841.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containin...    99   3e-19
emb|CBI17411.3| unnamed protein product [Vitis vinifera]               99   3e-19
ref|XP_002306135.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18
ref|NP_849971.1| PHD finger, SWIB/MDM2 and GYF domain-containing...    96   3e-18

>ref|XP_002310841.1| predicted protein [Populus trichocarpa] gi|222853744|gb|EEE91291.1|
           predicted protein [Populus trichocarpa]
          Length = 1256

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 43/77 (55%), Positives = 51/77 (66%)
 Frame = +2

Query: 2   TRDSSYLCVRGDKGFCNTCMKVIMLIENKEQINKEVAQVDFDDARNWEYLFKIYWIXXXX 181
           T+D+ YLCVRG+KGFC TCM+ IMLIEN   +N+E  QVDFDD  +WEYLFK+YWI    
Sbjct: 105 TKDADYLCVRGNKGFCGTCMRTIMLIENIATVNQEKVQVDFDDTTSWEYLFKVYWIYLKA 164

Query: 182 XXXXXXXXXXXXKNPWK 232
                       KNPWK
Sbjct: 165 KLSLTIDELTKAKNPWK 181


>ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containing protein 44-like
           [Vitis vinifera]
          Length = 1643

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 42/84 (50%), Positives = 56/84 (66%)
 Frame = +2

Query: 5   RDSSYLCVRGDKGFCNTCMKVIMLIENKEQINKEVAQVDFDDARNWEYLFKIYWIXXXXX 184
           +D+  LCVRG+KGFC TCM+ ++L+E+ E+ NKE+AQVDFDD  +WEYLFK+YWI     
Sbjct: 188 KDADILCVRGNKGFCTTCMRTVLLVEDNERGNKEMAQVDFDDKSSWEYLFKVYWIYLKGK 247

Query: 185 XXXXXXXXXXXKNPWKESGSVTTK 256
                      KNPWK +G +  K
Sbjct: 248 LSLTLEELTRAKNPWKGAGLMARK 271


>emb|CBI17411.3| unnamed protein product [Vitis vinifera]
          Length = 1362

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 42/84 (50%), Positives = 56/84 (66%)
 Frame = +2

Query: 5   RDSSYLCVRGDKGFCNTCMKVIMLIENKEQINKEVAQVDFDDARNWEYLFKIYWIXXXXX 184
           +D+  LCVRG+KGFC TCM+ ++L+E+ E+ NKE+AQVDFDD  +WEYLFK+YWI     
Sbjct: 188 KDADILCVRGNKGFCTTCMRTVLLVEDNERGNKEMAQVDFDDKSSWEYLFKVYWIYLKGK 247

Query: 185 XXXXXXXXXXXKNPWKESGSVTTK 256
                      KNPWK +G +  K
Sbjct: 248 LSLTLEELTRAKNPWKGAGLMARK 271


>ref|XP_002306135.1| predicted protein [Populus trichocarpa] gi|222849099|gb|EEE86646.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 46/86 (53%), Positives = 53/86 (61%)
 Frame = +2

Query: 5   RDSSYLCVRGDKGFCNTCMKVIMLIENKEQINKEVAQVDFDDARNWEYLFKIYWIXXXXX 184
           +D+  LCVRG+KGFC TCMK IMLIE  EQ +KE  QVDFDD  +WEYLFK YW      
Sbjct: 9   KDAVILCVRGNKGFCETCMKTIMLIERNEQGSKETVQVDFDDKSSWEYLFKDYWNDLKER 68

Query: 185 XXXXXXXXXXXKNPWKESGSVTTKKQ 262
                      KNPWK S S T K++
Sbjct: 69  LSLTPEELAQAKNPWKGSDSHTGKQE 94


>ref|NP_849971.1| PHD finger, SWIB/MDM2 and GYF domain-containing protein
           [Arabidopsis thaliana]
           gi|13877655|gb|AAK43905.1|AF370586_1 Unknown protein
           [Arabidopsis thaliana] gi|330251631|gb|AEC06725.1| PHD
           finger, SWIB/MDM2 and GYF domain-containing protein
           [Arabidopsis thaliana]
          Length = 824

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 44/86 (51%), Positives = 51/86 (59%)
 Frame = +2

Query: 5   RDSSYLCVRGDKGFCNTCMKVIMLIENKEQINKEVAQVDFDDARNWEYLFKIYWIXXXXX 184
           R S Y+ VR +KGFC  CMK IMLIEN  + NKE  QVDFDD  +WEYLFKIYW+     
Sbjct: 152 RSSEYVVVRENKGFCGICMKTIMLIENAAEANKEKVQVDFDDQGSWEYLFKIYWVSLKEK 211

Query: 185 XXXXXXXXXXXKNPWKESGSVTTKKQ 262
                      KNPWK S S   K++
Sbjct: 212 LGLSLDDLTKAKNPWKSSSSTAAKRR 237


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