BLASTX nr result

ID: Bupleurum21_contig00018403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018403
         (963 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593907.1| hypothetical protein MTR_2g019220 [Medicago ...   317   2e-84
ref|XP_003542938.1| PREDICTED: uncharacterized protein LOC100791...   308   2e-81
ref|XP_002277705.1| PREDICTED: uncharacterized protein LOC100254...   307   3e-81
ref|XP_003547202.1| PREDICTED: uncharacterized protein LOC100807...   302   9e-80
ref|XP_002316711.1| predicted protein [Populus trichocarpa] gi|2...   301   1e-79

>ref|XP_003593907.1| hypothetical protein MTR_2g019220 [Medicago truncatula]
           gi|355482955|gb|AES64158.1| hypothetical protein
           MTR_2g019220 [Medicago truncatula]
          Length = 311

 Score =  317 bits (813), Expect = 2e-84
 Identities = 147/265 (55%), Positives = 194/265 (73%), Gaps = 2/265 (0%)
 Frame = -2

Query: 791 DNAVTLYQGTVTHERRHPVYQSFKLSVRYALIDLDRALDVPPNHLSAKQARSIAQTNGPV 612
           D  V+LY+GTV H+RRHPV+ SF+ +VRYALIDLDRAL  PPNHLS  +AR I  TNGP+
Sbjct: 47  DEPVSLYEGTVYHQRRHPVHHSFQYNVRYALIDLDRALHAPPNHLSPDEARQITDTNGPI 106

Query: 611 LLLAIPPSVGYQRSPVTLYYCYNLHQGSSTSILKNCIAEVSNTPWNEQVRFVFDPNSDLV 432
           LLL IP SVGY+++P+++YYCY++    S + LK CIAEV+NTPW E+V F+F+P+SDLV
Sbjct: 107 LLLTIPASVGYEQNPLSVYYCYDVED--SDTRLKKCIAEVTNTPWAERVTFIFNPHSDLV 164

Query: 431 AKTLHVSPFMDMLGDWQMKTRSPGKNLTVTVSVKHPVLGNYFTASLTAQRVLFTSKIDYA 252
           AK LHVSPFMDMLG W +K   PG+NL++++SV HP  GNYFTASL A+R+  TS  D+A
Sbjct: 165 AKALHVSPFMDMLGSWNIKASDPGENLSISISVHHPEFGNYFTASLKAKRLCPTSASDHA 224

Query: 251 LFFWLMPHKAAIYTYWQSLKLLVKNVQFFEHPKYKNPAYIQDSLMAAEKRGCC--MAFPG 78
           +FFWLMPHK A++ YW ++KL  +NV+F +HP+Y  PAY  D+L+   K  CC   A  G
Sbjct: 225 VFFWLMPHKVAVWIYWHAIKLWWQNVKFIQHPRYNIPAYRDDALIRDRKLQCCGFSAQRG 284

Query: 77  DSDDHDKNKLRNGERWYAWKRVQWP 3
            + D   ++     RW+ W   +WP
Sbjct: 285 SNQDCLADEASPRHRWFKWTDAKWP 309


>ref|XP_003542938.1| PREDICTED: uncharacterized protein LOC100791856 [Glycine max]
          Length = 318

 Score =  308 bits (788), Expect = 2e-81
 Identities = 145/273 (53%), Positives = 193/273 (70%), Gaps = 13/273 (4%)
 Frame = -2

Query: 782 VTLYQGTVTHERRHPVYQSFKLSVRYALIDLDRALDVPPNHLSAKQARSIAQTNGPVLLL 603
           ++LY+GTV H+RRHPV  SF+  VRYALIDLDRA   P +HLS  +AR I  TNGP+LLL
Sbjct: 50  ISLYEGTVWHQRRHPVNHSFQYQVRYALIDLDRAPHAPHDHLSLDEARQITDTNGPILLL 109

Query: 602 AIPPSVGYQRSPVTLYYCYNLHQGSSTSILKNCIAEVSNTPWNEQVRFVFDPNSDLVAKT 423
            IPPSVGY+++P+++YYCY +    ST  LK CIAEV+NTPW E+V FVF+P+SDLVAK 
Sbjct: 110 TIPPSVGYEQNPLSVYYCYAVE--GSTKRLKKCIAEVTNTPWGERVSFVFNPHSDLVAKA 167

Query: 422 LHVSPFMDMLGDWQMKTRSPGKNLTVTVSVKHPVLGNYFTASLTAQRVLFTSKIDYALFF 243
           LHVSPFMDMLG W +K   PG+NLT+++SV HP  GNYFTASL A+++  + + D+A+FF
Sbjct: 168 LHVSPFMDMLGSWNIKANDPGENLTISISVHHPEHGNYFTASLKAKKLCSSPESDHAVFF 227

Query: 242 WLMPHKAAIYTYWQSLKLLVKNVQFFEHPKYKNPAYIQDSLMAAEKRGCCMAFPGDSDDH 63
           WLMPHK A++ YW ++KL  KNV+F +HP+Y  P Y  ++LM  +K  CC    G SDD+
Sbjct: 228 WLMPHKVAVWIYWHAIKLWWKNVRFVQHPRYSIPTYKDEALMRDKKLQCC----GLSDDN 283

Query: 62  DKNKLRNG-------------ERWYAWKRVQWP 3
            ++  + G              RW+ W+  +WP
Sbjct: 284 RQHLQQRGSDPGCCLAELSPQNRWFRWRDAKWP 316


>ref|XP_002277705.1| PREDICTED: uncharacterized protein LOC100254825 [Vitis vinifera]
           gi|147866339|emb|CAN79921.1| hypothetical protein
           VITISV_002110 [Vitis vinifera]
           gi|297740736|emb|CBI30918.3| unnamed protein product
           [Vitis vinifera]
          Length = 318

 Score =  307 bits (786), Expect = 3e-81
 Identities = 149/275 (54%), Positives = 193/275 (70%), Gaps = 12/275 (4%)
 Frame = -2

Query: 791 DNAVTLYQGTVTHERRHPVYQSFKLSVRYALIDLDRALDVPPNHLSAKQARSIAQTNGPV 612
           ++ V+LY+GTV HERR PV+ SF+ +VRYAL+D+D A +V P+HLS  +AR IA T GPV
Sbjct: 47  EDPVSLYEGTVWHERRRPVHHSFRYAVRYALVDIDSAPNVLPDHLSGDEARRIAGTTGPV 106

Query: 611 LLLAIPPSVGYQRSPVTLYYCYNLHQGSSTSILKNCIAEVSNTPWNEQVRFVFDPNSDLV 432
            LL IPPSVGY+++P++LYYCY+L   +ST  LK CIAEV+NTPW E+V FVF+PN DLV
Sbjct: 107 FLLTIPPSVGYEQNPLSLYYCYDL--AASTQNLKQCIAEVTNTPWGERVTFVFNPNFDLV 164

Query: 431 AKTLHVSPFMDMLGDWQMKTRSPGKNLTVTVSVKHPVLGNYFTASLTAQRVLFTSKIDYA 252
           AK LHVSPFMDM G+W +K   PG NL V ++V+HP LGNYFTA+LTA++V  +  +D  
Sbjct: 165 AKPLHVSPFMDMYGNWSIKANVPGDNLLVAITVQHPKLGNYFTATLTAKKVSSSLVVDRE 224

Query: 251 LFFWLMPHKAAIYTYWQSLKLLVKNVQFFEHPKYKNPAYIQDSLMAAEKRGCCMAFPGDS 72
           LFFWLMPHK AI+ YW +LKL  KNVQF  HPK  NPAY +++ +   K  CC A     
Sbjct: 225 LFFWLMPHKVAIWIYWHALKLWWKNVQFIHHPKCSNPAYREEASVRDRKLKCCQASGLGE 284

Query: 71  DDHDKNKLRNG------------ERWYAWKRVQWP 3
           D+H    L  G            +RW++W+  +WP
Sbjct: 285 DEH---MLVGGSGPDFVADNYEEDRWFSWRDAKWP 316


>ref|XP_003547202.1| PREDICTED: uncharacterized protein LOC100807625 [Glycine max]
          Length = 300

 Score =  302 bits (773), Expect = 9e-80
 Identities = 140/260 (53%), Positives = 186/260 (71%)
 Frame = -2

Query: 782 VTLYQGTVTHERRHPVYQSFKLSVRYALIDLDRALDVPPNHLSAKQARSIAQTNGPVLLL 603
           ++LY+GTV H+RRHPV  SF+  VRYALIDLDRA   P +HLS  +AR I  TNGP+LLL
Sbjct: 50  ISLYEGTVWHQRRHPVNHSFQYRVRYALIDLDRAPREPHDHLSPDKARQITDTNGPILLL 109

Query: 602 AIPPSVGYQRSPVTLYYCYNLHQGSSTSILKNCIAEVSNTPWNEQVRFVFDPNSDLVAKT 423
            IPPSVGY+++P+++YYCY +    ST  LK CIAEV+NTPW E+V F+F+P+SDLVAK 
Sbjct: 110 TIPPSVGYEQNPLSVYYCYAVE--GSTKWLKKCIAEVTNTPWGERVSFLFNPHSDLVAKA 167

Query: 422 LHVSPFMDMLGDWQMKTRSPGKNLTVTVSVKHPVLGNYFTASLTAQRVLFTSKIDYALFF 243
           LHVSPFMDMLG W +K   PG+NLT+++SV HP  GNYF ASL A+++  + + D+A+FF
Sbjct: 168 LHVSPFMDMLGSWNIKANDPGENLTISISVHHPEHGNYFAASLKARKLCSSPESDHAVFF 227

Query: 242 WLMPHKAAIYTYWQSLKLLVKNVQFFEHPKYKNPAYIQDSLMAAEKRGCCMAFPGDSDDH 63
           WLMPHK A++ YWQ++KL  KNV+F +HP+Y  P+Y  ++LM   K  CC      S  +
Sbjct: 228 WLMPHKVAVWIYWQAIKLWWKNVRFVQHPRYNIPSYKDEALMRDNKLQCCGCLAEASPQN 287

Query: 62  DKNKLRNGERWYAWKRVQWP 3
                    RW+ W+  +WP
Sbjct: 288 ---------RWFRWRDAKWP 298


>ref|XP_002316711.1| predicted protein [Populus trichocarpa] gi|222859776|gb|EEE97323.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  301 bits (772), Expect = 1e-79
 Identities = 146/268 (54%), Positives = 192/268 (71%), Gaps = 6/268 (2%)
 Frame = -2

Query: 788 NAVTLYQGTVTHERRHPVYQSFKLSVRYALIDLDRALDVPPNHLSAKQARSIAQTNGPVL 609
           NAV+LYQGTV HERR PV+ SF  SVRYAL DLD A   PP+HLSA +AR +AQT GPV 
Sbjct: 41  NAVSLYQGTVWHERRRPVHHSFLYSVRYALFDLDHA-HAPPDHLSADEARQVAQTTGPVF 99

Query: 608 LLAIPPSVGYQRSPVTLYYCYNLHQGSSTSILKNCIAEVSNTPWNEQVRFVFDPNSDLVA 429
           LL IPPSVGY+++P++LYYCY++    S  +LK CIAEV+NTPW E+V F+F PNSD+VA
Sbjct: 100 LLTIPPSVGYEQNPLSLYYCYDMD--GSARLLKKCIAEVTNTPWGERVVFIFYPNSDVVA 157

Query: 428 KTLHVSPFMDMLGDWQMKTRSPGKNLTVTVSVKHPVLGNYFTASLTAQRVLFTSKIDYAL 249
           K LHVSPFMDMLG+W +K   P  +L+V +SV+HP LG+YF ASL A+R+  +S  D+A+
Sbjct: 158 KPLHVSPFMDMLGNWNIKANDPTDSLSVFISVQHPELGDYFVASLKAKRL--SSVSDHAM 215

Query: 248 FFWLMPHKAAIYTYWQSLKLLVKNVQFFEHPKYKNPAYIQDSLMAAEKRGCCMAFPGD-- 75
           FFWLMPHK A++ YW +LKL  KNV F +HP+Y NP Y +++++  +K  C  A   D  
Sbjct: 216 FFWLMPHKVALWIYWHALKLWWKNVHFIQHPRYTNPTYREEAMIRDKKLQCNQALAWDRG 275

Query: 74  ----SDDHDKNKLRNGERWYAWKRVQWP 3
               +D H    L + +RW+ W+  + P
Sbjct: 276 NCLQADGHHPGNLADRKRWFKWRDAKRP 303


Top