BLASTX nr result

ID: Bupleurum21_contig00018390 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018390
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237961.1| uncharacterized protein LOC100306382 [Glycin...   139   3e-31
ref|XP_002275482.1| PREDICTED: nuclear transcription factor Y su...   135   3e-30
ref|XP_002312821.1| predicted protein [Populus trichocarpa] gi|1...   135   4e-30
ref|XP_002523813.1| DNA polymerase epsilon P17 subunit, putative...   133   2e-29
gb|AFK43246.1| unknown [Lotus japonicus]                              132   4e-29

>ref|NP_001237961.1| uncharacterized protein LOC100306382 [Glycine max]
           gi|255628363|gb|ACU14526.1| unknown [Glycine max]
          Length = 161

 Score =  139 bits (349), Expect = 3e-31
 Identities = 67/97 (69%), Positives = 85/97 (87%)
 Frame = -1

Query: 338 VGEAEKLPKSMVRKLVKDKLSQYSKDGEISVLNEAVEAFSESSRIFIHYLSAAANDVCKE 159
           + EAE+LP+S+VR++VKDKLS+ S+DGEISV  +A+ AFSES RIFIHYLSA AND+CKE
Sbjct: 1   MSEAEELPRSIVRRVVKDKLSRCSEDGEISVSKDALLAFSESGRIFIHYLSATANDICKE 60

Query: 158 SNRQTISAEDVFKALEDIEFPEFIAPLRASLEDFRQQ 48
           S RQ I+ EDVFKALE+ EFPEF+ PL+ASLE+FR++
Sbjct: 61  SKRQIINVEDVFKALEETEFPEFLRPLKASLEEFRKK 97


>ref|XP_002275482.1| PREDICTED: nuclear transcription factor Y subunit B-8 [Vitis
           vinifera] gi|296084907|emb|CBI28316.3| unnamed protein
           product [Vitis vinifera]
          Length = 193

 Score =  135 bits (341), Expect = 3e-30
 Identities = 65/101 (64%), Positives = 87/101 (86%), Gaps = 1/101 (0%)
 Frame = -1

Query: 347 EKV-VGEAEKLPKSMVRKLVKDKLSQYSKDGEISVLNEAVEAFSESSRIFIHYLSAAAND 171
           EKV V E E+LPK++VR++VKDKLSQ+S DG+I +  + + AF ES+RIFIHYLSA AND
Sbjct: 2   EKVAVAEVEELPKTIVRRVVKDKLSQFSDDGDIIIHKDGLRAFCESARIFIHYLSATAND 61

Query: 170 VCKESNRQTISAEDVFKALEDIEFPEFIAPLRASLEDFRQQ 48
           +CKES RQTI+A+DV KA+E+IEFPEF+ PL+ASL++FR++
Sbjct: 62  LCKESRRQTINADDVLKAIEEIEFPEFVQPLKASLDEFRKK 102


>ref|XP_002312821.1| predicted protein [Populus trichocarpa] gi|118484583|gb|ABK94165.1|
           unknown [Populus trichocarpa]
           gi|222849229|gb|EEE86776.1| predicted protein [Populus
           trichocarpa]
          Length = 145

 Score =  135 bits (339), Expect = 4e-30
 Identities = 66/101 (65%), Positives = 88/101 (87%), Gaps = 1/101 (0%)
 Frame = -1

Query: 347 EKVVGEAEKLPKSMVRKLVKDKLSQYS-KDGEISVLNEAVEAFSESSRIFIHYLSAAAND 171
           EKVV EAE+LPK++VR++VKD LS+ S +D +I+V  +A+ AFSES+RIFIHYLSA AND
Sbjct: 4   EKVVAEAEELPKAIVRRVVKDTLSRCSPEDSDINVHKDALLAFSESARIFIHYLSATAND 63

Query: 170 VCKESNRQTISAEDVFKALEDIEFPEFIAPLRASLEDFRQQ 48
           +CKES RQT++A+DVFKALEDIEFPEF+ PL+ SL +F+++
Sbjct: 64  ICKESKRQTMNADDVFKALEDIEFPEFVGPLKVSLSEFKRK 104


>ref|XP_002523813.1| DNA polymerase epsilon P17 subunit, putative [Ricinus communis]
           gi|223536901|gb|EEF38539.1| DNA polymerase epsilon P17
           subunit, putative [Ricinus communis]
          Length = 157

 Score =  133 bits (334), Expect = 2e-29
 Identities = 69/119 (57%), Positives = 89/119 (74%)
 Frame = -1

Query: 359 KNVPEKVVGEAEKLPKSMVRKLVKDKLSQYSKDGEISVLNEAVEAFSESSRIFIHYLSAA 180
           K   EKVV + E+L K++VR+LVKDKLSQ S D E  +  ++V  FSE++RIFIHYLSA 
Sbjct: 15  KEKVEKVVPQVEELQKAIVRRLVKDKLSQCSPDVEFIIPKDSVAVFSETARIFIHYLSAT 74

Query: 179 ANDVCKESNRQTISAEDVFKALEDIEFPEFIAPLRASLEDFRQQXXXXXXXXXXXKEVE 3
           AND+CKE+NRQT++A+DVFKALE+IEF EFI PL+ASL +F+Q+           KEVE
Sbjct: 75  ANDICKEANRQTMNADDVFKALEEIEFSEFIRPLKASLNEFKQKTAGRKAGVSEPKEVE 133


>gb|AFK43246.1| unknown [Lotus japonicus]
          Length = 191

 Score =  132 bits (331), Expect = 4e-29
 Identities = 63/97 (64%), Positives = 84/97 (86%)
 Frame = -1

Query: 338 VGEAEKLPKSMVRKLVKDKLSQYSKDGEISVLNEAVEAFSESSRIFIHYLSAAANDVCKE 159
           + E + LPK++VR++VKDKLS+ S+DG+IS+  +A+ AFSES++IFIHY+SA AND+CKE
Sbjct: 1   MAEPDDLPKTIVRRVVKDKLSRCSEDGDISIHKDALLAFSESAKIFIHYISATANDICKE 60

Query: 158 SNRQTISAEDVFKALEDIEFPEFIAPLRASLEDFRQQ 48
           S RQ I+AEDVFKALE+ EF EFI PLRASLE+FR++
Sbjct: 61  SRRQIINAEDVFKALEETEFAEFIRPLRASLEEFRKK 97


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