BLASTX nr result

ID: Bupleurum21_contig00018381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018381
         (1744 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33881.3| unnamed protein product [Vitis vinifera]              409   e-111
ref|XP_002329560.1| predicted protein [Populus trichocarpa] gi|2...   367   7e-99
ref|XP_004165982.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   352   2e-94
ref|XP_004148760.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   352   2e-94
ref|XP_002326526.1| predicted protein [Populus trichocarpa] gi|2...   350   5e-94

>emb|CBI33881.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score =  409 bits (1050), Expect = e-111
 Identities = 238/488 (48%), Positives = 295/488 (60%), Gaps = 17/488 (3%)
 Frame = -3

Query: 1742 DAHEFLQCFLDRLESSSGDSNLKEITSCVKNDNFVKRAFGGCLVSKLKCCSCGHHSDTHE 1563
            DAHEFLQC LDRL+S    +  K   S   +DN VK  FGG L+SKL+CC+CGH SDT+E
Sbjct: 54   DAHEFLQCLLDRLDSFYLMNQDKGSHS--PDDNLVKHVFGGYLISKLRCCNCGHISDTYE 111

Query: 1562 PMIDLSLEIEDVTTLQAALDSFTKLEKIEDLETKFVCENCKEEVSIEKQLLLEETPSVAA 1383
            P+IDLSLEIEDV TL  AL+SFTK+EKIED E KF C+NCKEEVS+EKQLLL++ P VAA
Sbjct: 112  PLIDLSLEIEDVDTLPCALESFTKVEKIEDPEMKFTCDNCKEEVSVEKQLLLDQVPLVAA 171

Query: 1382 MHLKRFKNDGSFVEKIDKFVEFPLELDLQPYTKCSQNSDVEMKYELYAIVVHTGFSATSG 1203
             HLKRFK DG++VEKIDK VEFPLELDL PYTK  ++ +VE+KYELYAIV HTGFS+TSG
Sbjct: 172  FHLKRFKTDGTYVEKIDKHVEFPLELDLLPYTKEREDDNVELKYELYAIVEHTGFSSTSG 231

Query: 1202 HYYSFIRSAPDTWYKFDDSKVVRVQEKFVLSQDAYILFYAKQGMPSFSSYLETIKPFLDP 1023
            HY+S+IRS+PDTW++ DDSKV  V E +VL Q+AYILFYA+QG P FSS ++T KP LDP
Sbjct: 232  HYFSYIRSSPDTWHRLDDSKVTSVPEDYVLHQEAYILFYARQGTPWFSSLMQTQKPCLDP 291

Query: 1022 HRNSTSPKSVLDNVDVCALS-PNHATTCKYNLNET----------------SNVSHAQVD 894
            + +  SPKSVLDNVD  + S P  A    +  +ET                 +V     D
Sbjct: 292  NTSGNSPKSVLDNVDSISTSLPTLANVYSHEASETVDAADEISTCLSGGGRGDVVQVHED 351

Query: 893  GIIYKDDTQRMSCTLPPSASYPIESPTDRSNGKDDKTRGSSTLPPGTSVYVKDDGNGMKV 714
            G    D   R+   +P          T   +G  D T+  ST    TS     DGN    
Sbjct: 352  G----DVPHRVDTPMPLGV-------TSCFDGTLDHTQNIST----TSPCRDHDGN---- 392

Query: 713  ISPSVLQEYILNQDDVKIISYNHPQTPPRSYSPDIYRDESPEVELHITPSHHKLANQVSH 534
                   ++I      KI    HPQTPPRS SPDIY +E PEV  +I   H +  NQV+ 
Sbjct: 393  -------QHINENCKSKI----HPQTPPRSPSPDIYAEEPPEVSYNIPRGHLRQKNQVAC 441

Query: 533  KKGSKKKQESLETEQAFRLLKTFPGSKRRETLLAAMGRSLSDDTQKNKRRKRMQVTPNKD 354
            KK   K  E     +A +L K  P S+    + A  G        K K ++RM+ + N +
Sbjct: 442  KKPLNKALEDSRKREACKLCKNMPASRSMRLMAAMKGSQSEGSLGKKKSKRRMESSANGE 501

Query: 353  DSPSTTNK 330
             +     K
Sbjct: 502  SNTRARRK 509


>ref|XP_002329560.1| predicted protein [Populus trichocarpa] gi|222870269|gb|EEF07400.1|
            predicted protein [Populus trichocarpa]
          Length = 809

 Score =  367 bits (941), Expect = 7e-99
 Identities = 214/488 (43%), Positives = 296/488 (60%), Gaps = 8/488 (1%)
 Frame = -3

Query: 1742 DAHEFLQCFLDRLESSSGDSNLKEITSCVKNDNFVKRAFGGCLVSKLKCCSCGHHSDTHE 1563
            DAHEFLQC L+RLE S  DS+L +  S  ++ N V+R FGG LVSKL+CC+CGH SD +E
Sbjct: 349  DAHEFLQCLLERLERSCLDSSLTDDISSSQDKNIVERVFGGRLVSKLRCCNCGHFSDKYE 408

Query: 1562 PMIDLSLEIEDVTTLQAALDSFTKLEKIEDLETKFVCENCKEEVSIEKQLLLEETPSVAA 1383
            P+IDLSLEIED  TLQ AL+SFT +EKIED ETKF CENCKEEVS EKQL+L++ PS+AA
Sbjct: 409  PLIDLSLEIEDADTLQIALESFTNVEKIEDSETKFTCENCKEEVSREKQLMLDKAPSIAA 468

Query: 1382 MHLKRFKNDGSFVEKIDKFVEFPLELDLQPYTKCSQNSDVEMKYELYAIVVHTGFSATSG 1203
            +HLKRFK DG+ VEKI K VEFPLELDL+PY   + ++DV  KY+LYA+VVH G+S TSG
Sbjct: 469  LHLKRFKIDGTSVEKIGKHVEFPLELDLKPYINDNDSNDVGFKYQLYAVVVHKGYSLTSG 528

Query: 1202 HYYSFIRSAPDTWYKFDDSKVVRVQEKFVLSQDAYILFYAKQGMPSFSSYLETIKPFLDP 1023
            HY  +IRS+PDTW+K DD +V + +E+FVLSQ AYILFYA++G P  SS ++  +  LD 
Sbjct: 529  HYVCYIRSSPDTWHKLDDPEVSKEREEFVLSQAAYILFYAREGTPWCSSLIKPQEFCLDR 588

Query: 1022 HRNSTSPKSVLDN-----VDVCALSPNHATTCKYNLNETSN--VSHAQVDGIIYKDDTQR 864
              ++TSPKSVLDN     + V        +  K  +  TS       + + I+ + +T+ 
Sbjct: 589  SNSNTSPKSVLDNANSECISVADKDSLETSVIKDAVEATSTHIPCEREFEEIVSRGETEG 648

Query: 863  MSCTLPPSASYPIESPTDRSNGKDDKTRGSS-TLPPGTSVYVKDDGNGMKVISPSVLQEY 687
            +S  +  +    +  P   S+G D          PP     V++D +           E 
Sbjct: 649  ISFQISCANMVDVSLPHGVSDGHDGVLHDEMLCFPP-----VEEDYSNQ-------CAEK 696

Query: 686  ILNQDDVKIISYNHPQTPPRSYSPDIYRDESPEVELHITPSHHKLANQVSHKKGSKKKQE 507
            I  + D++      P  PPRS + D+Y  E PE    I   H K+ N V+ K+ SKK  +
Sbjct: 697  IGRKGDLR------PSAPPRSPTSDVYSGELPEARRCIPREHLKVENHVNCKRSSKKGTK 750

Query: 506  SLETEQAFRLLKTFPGSKRRETLLAAMGRSLSDDTQKNKRRKRMQVTPNKDDSPSTTNKK 327
              +T +A R +K  P ++  + + A + R+       +K R R   +P K  SP  + +K
Sbjct: 751  DSQTAEALRCIKRMPTARGMKLMAALLPRN-------DKTRPRS--SPCKRASPPGSRRK 801

Query: 326  AVLQSLVR 303
             +  +++R
Sbjct: 802  PIRVAVIR 809


>ref|XP_004165982.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cucumis
            sativus]
          Length = 621

 Score =  352 bits (902), Expect = 2e-94
 Identities = 209/474 (44%), Positives = 287/474 (60%), Gaps = 2/474 (0%)
 Frame = -3

Query: 1742 DAHEFLQCFLDRLESSSGDSNLKEITSCVKNDNFVKRAFGGCLVSKLKCCSCGHHSDTHE 1563
            DAHEF+QCFLD+LE          ++S  ++D+ V + FGG L+S L CC+CGH S+THE
Sbjct: 176  DAHEFMQCFLDKLERCMVSEGKDRVSS--EDDDLVNKVFGGRLISNLCCCNCGHCSETHE 233

Query: 1562 PMIDLSLEIEDVTTLQAALDSFTKLEKIEDLETKFVCENCKEEVSIEKQLLLEETPSVAA 1383
            P++DLSLEIE+V +L +AL+SFTK+E+I D ETKF CENCKEEV +EKQL LE+ P V  
Sbjct: 234  PLVDLSLEIENVDSLSSALESFTKVERIGDPETKFKCENCKEEVWVEKQLKLEKIPLVTT 293

Query: 1382 MHLKRFKNDGSFVEKIDKFVEFPLELDLQPYTKCSQNSDVEMKYELYAIVVHTGFSATSG 1203
             HLKRFK D SFVEKI+K +EFPLELDL+PYT   ++++VE+KYELYAIV HTGFS+TSG
Sbjct: 294  FHLKRFKADSSFVEKIEKHLEFPLELDLKPYTLGGKDAEVELKYELYAIVEHTGFSSTSG 353

Query: 1202 HYYSFIRSAPDTWYKFDDSKVVRVQEKFVLSQDAYILFYAKQGMPSFSSYLETIKPFLDP 1023
            HY+SF+RS+PDTW++ DDS V  V E++VLS++AYIL Y ++G   FSS ++   P L+ 
Sbjct: 354  HYFSFVRSSPDTWHRMDDSLVTSVTEEYVLSREAYILLYKRKGTSWFSSLIQRSDPCLNS 413

Query: 1022 HRNSTSPKSVLDNVDVCALSPNHATTCKYNLNETSNVSHAQVDGIIYKDDTQRMSCTLPP 843
              ++ SPKSVL N+          T C  +    S V+H         +     + TL P
Sbjct: 414  DSSNPSPKSVLQNI---------GTGCS-SFAAESKVNH---------ESANAPADTLQP 454

Query: 842  SASYPIESPTDRSNGKDDKTRGSSTLPPGTSVYVKDDGNGMKVISPSVLQEYILNQDDVK 663
                   SP   S   +++  G S L   TS  +    +     SP V ++  LN +D  
Sbjct: 455  -------SPARFSCEMENQDTGVSDLENATSANLNIVESATTKSSPIVTKDLCLNDEDES 507

Query: 662  IISYNHPQTPPRSYSPD-IYRDESPEVELHITPSHHKLANQVSHKKGSKKKQESLETEQA 486
            I  + HP +P RS SPD ++R  +PE +  I   H K     +      K  E  E + A
Sbjct: 508  IDGF-HPLSPVRSPSPDNVFR--TPEPQYRIPVDHLKTEKCSTSGSPLNKGVEDSERKAA 564

Query: 485  FRLL-KTFPGSKRRETLLAAMGRSLSDDTQKNKRRKRMQVTPNKDDSPSTTNKK 327
             R + K  PGS+  + + A +G S S+ +  NK +KR++  P K  SP  T +K
Sbjct: 565  MRYVKKNMPGSRGSKMIAAILG-SQSEGSSLNK-KKRLRSLPCKRSSPPNTRRK 616


>ref|XP_004148760.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cucumis
            sativus]
          Length = 676

 Score =  352 bits (902), Expect = 2e-94
 Identities = 209/474 (44%), Positives = 287/474 (60%), Gaps = 2/474 (0%)
 Frame = -3

Query: 1742 DAHEFLQCFLDRLESSSGDSNLKEITSCVKNDNFVKRAFGGCLVSKLKCCSCGHHSDTHE 1563
            DAHEF+QCFLD+LE          ++S  ++D+ V + FGG L+S L CC+CGH S+THE
Sbjct: 231  DAHEFMQCFLDKLERCMVSEGKDRVSS--EDDDLVNKVFGGRLISNLCCCNCGHCSETHE 288

Query: 1562 PMIDLSLEIEDVTTLQAALDSFTKLEKIEDLETKFVCENCKEEVSIEKQLLLEETPSVAA 1383
            P++DLSLEIE+V +L +AL+SFTK+E+I D ETKF CENCKEEV +EKQL LE+ P V  
Sbjct: 289  PLVDLSLEIENVDSLSSALESFTKVERIGDPETKFKCENCKEEVWVEKQLKLEKIPLVTT 348

Query: 1382 MHLKRFKNDGSFVEKIDKFVEFPLELDLQPYTKCSQNSDVEMKYELYAIVVHTGFSATSG 1203
             HLKRFK D SFVEKI+K +EFPLELDL+PYT   ++++VE+KYELYAIV HTGFS+TSG
Sbjct: 349  FHLKRFKADSSFVEKIEKHLEFPLELDLKPYTLGGKDAEVELKYELYAIVEHTGFSSTSG 408

Query: 1202 HYYSFIRSAPDTWYKFDDSKVVRVQEKFVLSQDAYILFYAKQGMPSFSSYLETIKPFLDP 1023
            HY+SF+RS+PDTW++ DDS V  V E++VLS++AYIL Y ++G   FSS ++   P L+ 
Sbjct: 409  HYFSFVRSSPDTWHRMDDSLVTSVTEEYVLSREAYILLYKRKGTSWFSSLIQRSDPCLNS 468

Query: 1022 HRNSTSPKSVLDNVDVCALSPNHATTCKYNLNETSNVSHAQVDGIIYKDDTQRMSCTLPP 843
              ++ SPKSVL N+          T C  +    S V+H         +     + TL P
Sbjct: 469  DSSNPSPKSVLQNI---------GTGCS-SFAAESKVNH---------ESANAPADTLQP 509

Query: 842  SASYPIESPTDRSNGKDDKTRGSSTLPPGTSVYVKDDGNGMKVISPSVLQEYILNQDDVK 663
                   SP   S   +++  G S L   TS  +    +     SP V ++  LN +D  
Sbjct: 510  -------SPARFSCEMENQDTGVSDLENATSANLNIVESATMKSSPIVTKDLCLNDEDES 562

Query: 662  IISYNHPQTPPRSYSPD-IYRDESPEVELHITPSHHKLANQVSHKKGSKKKQESLETEQA 486
            I  + HP +P RS SPD ++R  +PE +  I   H K     +      K  E  E + A
Sbjct: 563  IDGF-HPLSPVRSPSPDNVFR--TPEPQYRIPVDHLKTEKCSTSGSPLNKGVEDSERKAA 619

Query: 485  FRLL-KTFPGSKRRETLLAAMGRSLSDDTQKNKRRKRMQVTPNKDDSPSTTNKK 327
             R + K  PGS+  + + A +G S S+ +  NK +KR++  P K  SP  T +K
Sbjct: 620  MRYVKKNMPGSRGSKMIAAILG-SQSEGSSLNK-KKRLRSLPCKRSSPPNTRRK 671


>ref|XP_002326526.1| predicted protein [Populus trichocarpa] gi|222833848|gb|EEE72325.1|
            predicted protein [Populus trichocarpa]
          Length = 835

 Score =  350 bits (899), Expect = 5e-94
 Identities = 213/488 (43%), Positives = 297/488 (60%), Gaps = 9/488 (1%)
 Frame = -3

Query: 1742 DAHEFLQCFLDRLESSSGDSNLKEITSCVKNDNFVKRAFGGCLVSKLKCCSCGHHSDTHE 1563
            DAHEFLQC L+RLE    DS+L + ++   + N V+R FGG LVSKL+CC+CGH SD +E
Sbjct: 361  DAHEFLQCLLERLERHCLDSSLTDDSASSHDKNIVERVFGGRLVSKLRCCNCGHCSDKYE 420

Query: 1562 PMIDLSLEIEDVTTLQAALDSFTKLEKIEDLETKFVCENCKEEVSIEKQLLLEETPSVAA 1383
            P+IDLSLEIED  +LQ+AL+SFTK+EKIED ETKF CE+CKEEVS EKQL+L++ PSVAA
Sbjct: 421  PLIDLSLEIEDADSLQSALESFTKVEKIEDSETKFTCESCKEEVSREKQLMLDQAPSVAA 480

Query: 1382 MHLKRFKNDGSFVEKIDKFVEFPLELDLQPYTKCSQNSD-VEMKYELYAIVVHTGFSATS 1206
            +HLK FK DG+ VEKI K V+FPLELDL+PYT  +++SD V  KY+LYA+VVH G S  S
Sbjct: 481  LHLKIFKIDGTSVEKIGKHVQFPLELDLKPYTNDNEDSDEVGFKYQLYAVVVHKGDSLMS 540

Query: 1205 GHYYSFIRSAPDTWYKFDDSKVVRVQEKFVLSQDAYILFYAKQGMPSFSSYLETIKPFLD 1026
            GHY+ +IRS+PDTW+K DD +V + QE+FVLSQ AYILFYA++G P  SS ++  +   D
Sbjct: 541  GHYFCYIRSSPDTWHKLDDPEVSKEQEEFVLSQAAYILFYAREGTPWCSSLIKPQELCSD 600

Query: 1025 PHRNSTSPKSVLDNVD-VCALSPNHATTCKYNLNETSNVSHAQVDGIIYKDDTQRMSCTL 849
            P  ++TSPKSVLDNV+  C    N+ ++     N   +   A    I ++   +     +
Sbjct: 601  PSNSNTSPKSVLDNVNRECTGVGNNKSS---ETNVIKDAIEATSTHIPFERKFEESESRV 657

Query: 848  PPSASYPIESPTDRSNGKDDKTRGSS-----TLPPGTSVYVKDDGNGMKVISPSVLQEYI 684
                ++   SP +R N     + G +     ++P G S Y     +   +  P  ++E  
Sbjct: 658  ETKGNFVQISPANRPNFHRIVSIGETPMVDVSVPLGVSDYHDGVLHDEMLCFPPSVEEDN 717

Query: 683  LNQ--DDVKIISYNHPQTPPRSYSPDIYRDESPEVELHITPSHHKLANQVSHKKGSKKKQ 510
             NQ  + ++I    H  TP RS +PD      PE    I   H K  N+V+ K+ SKK  
Sbjct: 718  CNQGAEKIEINGDLHSPTPHRSPTPD---KGLPEARHRILRDHQKGENRVNCKRSSKKVT 774

Query: 509  ESLETEQAFRLLKTFPGSKRRETLLAAMGRSLSDDTQKNKRRKRMQVTPNKDDSPSTTNK 330
            +  +T +A R +K  P ++  + + A + R+       +K R R   +P K  SP  +  
Sbjct: 775  KDSQTAEALRCIKRMPTARGMKLMAAMLPRN-------DKIRPRS--SPCKRASPPGSRC 825

Query: 329  KAVLQSLV 306
            K  ++  V
Sbjct: 826  KPTIRMAV 833


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