BLASTX nr result

ID: Bupleurum21_contig00018380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018380
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322670.1| predicted protein [Populus trichocarpa] gi|2...   125   7e-27
ref|XP_002308367.1| predicted protein [Populus trichocarpa] gi|2...   123   3e-26
ref|XP_002527421.1| conserved hypothetical protein [Ricinus comm...   119   4e-25
ref|XP_002878181.1| hypothetical protein ARALYDRAFT_486249 [Arab...   111   1e-22
ref|XP_002278955.1| PREDICTED: uncharacterized protein LOC100260...   110   2e-22

>ref|XP_002322670.1| predicted protein [Populus trichocarpa] gi|222867300|gb|EEF04431.1|
           predicted protein [Populus trichocarpa]
          Length = 325

 Score =  125 bits (314), Expect = 7e-27
 Identities = 75/148 (50%), Positives = 95/148 (64%), Gaps = 10/148 (6%)
 Frame = -1

Query: 619 LFSGDKFTVLPSFDLPDSGVVKSYVSGMEVTARTSMPFRNFAVMNFRWGVRLPPVEDAEV 440
           +F G + TVLP      +  V    SG+EVTA+T +P R+ AV++FRWGVR+P    AE+
Sbjct: 164 VFCGKRITVLPPVT---ASAVAGLFSGVEVTAKTRLPVRSKAVVSFRWGVRVP----AEI 216

Query: 439 KSLLMKSDRTADISLKRLPILVMNKIGIEHVATNDD-DKKEG---------GNGNVAEAC 290
           KS     + TA I+ + +P+ VMNKIGIEHV   D+  KKEG         GN  VAEAC
Sbjct: 217 KS---GGESTAGINFRTIPVFVMNKIGIEHVDGRDERSKKEGTTGKVEMDSGNAEVAEAC 273

Query: 289 LDVRRQLEAIQMENGKLRKAVEDLSSEI 206
           L V+RQLE +Q ENG LRKAVE+LS EI
Sbjct: 274 LGVKRQLEVLQSENGHLRKAVEELSEEI 301


>ref|XP_002308367.1| predicted protein [Populus trichocarpa] gi|222854343|gb|EEE91890.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score =  123 bits (309), Expect = 3e-26
 Identities = 74/150 (49%), Positives = 93/150 (62%), Gaps = 10/150 (6%)
 Frame = -1

Query: 625 NDLFSGDKFTVLPSFDLPDSGVVKSYVSGMEVTARTSMPFRNFAVMNFRWGVRLPPVEDA 446
           N +F G +  VLP      +  V    SG+EV ART +P R+ AV+NFRWGVR+P    A
Sbjct: 166 NGMFYGKRIAVLPPVT---ASAVAGVFSGLEVAARTKLPVRSRAVVNFRWGVRVP----A 218

Query: 445 EVKSLLMKSDRTADISLKRLPILVMNKIGIEHVATNDD-DKKEG---------GNGNVAE 296
           E+KS     + TA I+ +++P LVMNK+GIEHV   D   KKEG         GN +VAE
Sbjct: 219 EIKS--GSGESTAGINFRKIPFLVMNKVGIEHVDDGDGRSKKEGTTGKVGMELGNSDVAE 276

Query: 295 ACLDVRRQLEAIQMENGKLRKAVEDLSSEI 206
           ACL V+RQLE +Q ENG L+KAVE L  EI
Sbjct: 277 ACLGVKRQLEILQSENGHLKKAVEGLREEI 306


>ref|XP_002527421.1| conserved hypothetical protein [Ricinus communis]
           gi|223533231|gb|EEF34987.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 361

 Score =  119 bits (299), Expect = 4e-25
 Identities = 73/163 (44%), Positives = 97/163 (59%), Gaps = 15/163 (9%)
 Frame = -1

Query: 649 KVVDYSTKNDLFSGDKFTVLPSFDLPDSGVVKSYVSGMEVTARTSMPFRNFAVMNFRWGV 470
           +VVD    ++  S  K  VLP    P +  +    SG+EVTA T +P R+ A+MNFRWGV
Sbjct: 144 EVVDSPVLSNGLSEKKIRVLPQ---PTASAIVGAFSGVEVTASTKLPVRSRAMMNFRWGV 200

Query: 469 RLPPVEDAEVKSLLMKSDRTADISLKRLPILVMNKIGIEHVATNDDDKKEGG-------- 314
           R+P    AE+KS    SD  A I+ + +P LVMNKIGIEHV + DD K +G         
Sbjct: 201 RVP----AEIKS--GSSDSMAGINFRNIPFLVMNKIGIEHVDSCDDSKSKGKVMTPLNVT 254

Query: 313 -------NGNVAEACLDVRRQLEAIQMENGKLRKAVEDLSSEI 206
                  N ++AEACL V++Q+E +Q ENG L+KAV+DL  EI
Sbjct: 255 KLGSELRNVDMAEACLSVKKQMEVLQAENGLLKKAVDDLRQEI 297


>ref|XP_002878181.1| hypothetical protein ARALYDRAFT_486249 [Arabidopsis lyrata subsp.
           lyrata] gi|297324019|gb|EFH54440.1| hypothetical protein
           ARALYDRAFT_486249 [Arabidopsis lyrata subsp. lyrata]
          Length = 357

 Score =  111 bits (277), Expect = 1e-22
 Identities = 72/157 (45%), Positives = 92/157 (58%), Gaps = 9/157 (5%)
 Frame = -1

Query: 649 KVVDYSTKNDLFSG-DKFTVLPSFDLPDSGVVKSYVSGMEVTARTSMPFRNFAVMNFRWG 473
           +VVD    N    G  K TVLPS     +G +   +SG+EV ARTS+P R  AV+NFRWG
Sbjct: 142 EVVDTPAVNGCGGGFRKVTVLPS---TSAGDIAGLLSGVEVAARTSLPVRGRAVLNFRWG 198

Query: 472 VRLPPVEDAEVKSLLMKSDRTADISLKRLPILVMNKIGIEHVATND--------DDKKEG 317
           VR+P         +    D TA ISL+R P LVMNKIGIEHV  +D        D  +  
Sbjct: 199 VRVP-------TEIRRDFDPTAAISLRRFPFLVMNKIGIEHVDGSDAKVTKPTSDPGQLT 251

Query: 316 GNGNVAEACLDVRRQLEAIQMENGKLRKAVEDLSSEI 206
            +G+VAE CL V RQ+E ++ EN +L++AVEDL   I
Sbjct: 252 TSGDVAEVCLAVNRQMEELRTENKQLKRAVEDLREVI 288


>ref|XP_002278955.1| PREDICTED: uncharacterized protein LOC100260592 [Vitis vinifera]
          Length = 367

 Score =  110 bits (275), Expect = 2e-22
 Identities = 63/154 (40%), Positives = 96/154 (62%), Gaps = 11/154 (7%)
 Frame = -1

Query: 637 YSTKNDLFSGDKFTVLPSFDLPDSGVVKSYVSGMEVTARTSMPFRNFAVMNFRWGVRLPP 458
           Y   N +FSG+K  V P   +  + V+    SG++++A T +P R  AV++FRWG+R+P 
Sbjct: 153 YFPVNGVFSGNKIGVSPPEGVSAASVINGLFSGVDLSANTVLPMRKGAVLSFRWGLRVP- 211

Query: 457 VEDAEVKSLLMKS---DRTADISLKRLPILVMNKIGIEHVATND--DDKKEG------GN 311
              AEVK+ L ++   + T+ IS +++P LVMNKIGIEHV + D  +D K        GN
Sbjct: 212 ---AEVKTALTENGAKNSTSAISFRKIPFLVMNKIGIEHVDSGDSKEDAKPSPPSNLTGN 268

Query: 310 GNVAEACLDVRRQLEAIQMENGKLRKAVEDLSSE 209
            ++ E  + V+R LE +Q ENG L+K+++DL SE
Sbjct: 269 ADMVETSMMVKRHLEVLQAENGLLKKSIDDLRSE 302


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