BLASTX nr result

ID: Bupleurum21_contig00018379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018379
         (1695 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633103.1| PREDICTED: uncharacterized protein LOC100853...   329   2e-87
ref|XP_002517598.1| racemase and epimerase, acting on amino acid...   321   3e-85
emb|CAN68957.1| hypothetical protein VITISV_015733 [Vitis vinifera]   311   4e-82
ref|XP_002303258.1| predicted protein [Populus trichocarpa] gi|2...   310   7e-82
ref|XP_002281753.1| PREDICTED: uncharacterized protein LOC100249...   298   4e-78

>ref|XP_003633103.1| PREDICTED: uncharacterized protein LOC100853647 [Vitis vinifera]
            gi|147821411|emb|CAN63506.1| hypothetical protein
            VITISV_011681 [Vitis vinifera]
          Length = 324

 Score =  329 bits (843), Expect = 2e-87
 Identities = 167/299 (55%), Positives = 214/299 (71%), Gaps = 16/299 (5%)
 Frame = -2

Query: 1514 RTDPSLVVQVSPMVLQTEEGGELPKSNQIQGSFTSEERCRIPXXXXXXXXXXS------- 1356
            R++PS  VQ+S + +QT+E G  P+S +I G   +  RC+ P                  
Sbjct: 21   RSNPSAAVQLSSVFIQTDESGNTPESKKILGPVAAVARCQAPNSLLTQANTVGILGGVSV 80

Query: 1355 --TLIFLEKYVWWSSRGGGDSAPFIVCSDPAISIPCRSTSTC----GKDKD---DHYSII 1203
              TLIFLEK VWWSSR G +S PF+VCSDP ++    S S      GK+     DH  I+
Sbjct: 81   FSTLIFLEKLVWWSSRHGEESLPFVVCSDPTLNRELASPSLSPFFRGKNAQFQLDHGPIV 140

Query: 1202 EDLRQKRVFLEQSGARCIVMPCHVSHLWHSEVSLGCSVPFLNIGDCVARELKEAKFRPLE 1023
            E+LR KR FLEQSGARCIVMPCH++H WHSEVS GC +PFL++G+CVA ELK+AKF+PLE
Sbjct: 141  ENLRCKRAFLEQSGARCIVMPCHLAHAWHSEVSKGCPLPFLHVGECVASELKKAKFKPLE 200

Query: 1022 AGSRVQIGVLADNSISMAVFYTKKLQSQGFEVVLPDKPTMEHAVLPALEALKKKDMEGAQ 843
            AGS V+IGVLA     MA FY +KLQSQGFEVVLPD  TMEH V+PA+EAL +KDMEGA+
Sbjct: 201  AGSNVRIGVLAPGETLMAGFYQEKLQSQGFEVVLPDMATMEHIVVPAIEALHRKDMEGAR 260

Query: 842  NLLRIAIHLLLMRAVNTIVLASDELRNVLPPDDPLLKRCVDPMDALVRATISLGRTSQK 666
            NLLRIA+H+ LMRAVN ++LASDE++++LP DDPL K+C++PMDAL R+TI   ++ ++
Sbjct: 261  NLLRIAVHIFLMRAVNIVILASDEMQDLLPRDDPLSKKCINPMDALARSTIGWAKSIEE 319


>ref|XP_002517598.1| racemase and epimerase, acting on amino acids and derivatives,
            putative [Ricinus communis] gi|223543230|gb|EEF44762.1|
            racemase and epimerase, acting on amino acids and
            derivatives, putative [Ricinus communis]
          Length = 330

 Score =  321 bits (823), Expect = 3e-85
 Identities = 168/329 (51%), Positives = 226/329 (68%), Gaps = 14/329 (4%)
 Frame = -2

Query: 1610 LFDGVLKSSFNTLGCPQVHVRNVNKKRAHHRTRTDPSLVVQVSPMVLQTEEGGELPKSNQ 1431
            +FDG L  SF++L  P     NVN  +  ++ R++    V  S ++L T+E G    S +
Sbjct: 1    MFDGSLIMSFHSLNYPSHRFNNVNTHKTSYKARSNLVQAVPPSSVILHTDESGRFRGSKK 60

Query: 1430 IQGSFTSEERCRIPXXXXXXXXXXSTLI-----FLEKYVWWSSRGGGDSAPFIVCSDPAI 1266
              GS TS+    +            T +     FL+K V WSS  G DS PF++CSDP +
Sbjct: 61   SSGS-TSDSSDLLLNQANTVGIIGGTSVNCALNFLKKLVQWSSEDGKDSLPFVLCSDPVL 119

Query: 1265 SIPCRSTS-----TCGKDKD----DHYSIIEDLRQKRVFLEQSGARCIVMPCHVSHLWHS 1113
            +    S       + G+ K+    DH  I+E+LR KRVFLE+SGARCIVMPCH+SH WH 
Sbjct: 120  NKELLSHERDFFPSIGRQKEYSKLDHAQIVENLRSKRVFLERSGARCIVMPCHISHSWHE 179

Query: 1112 EVSLGCSVPFLNIGDCVARELKEAKFRPLEAGSRVQIGVLADNSISMAVFYTKKLQSQGF 933
            +VS GCS+ FL++G+CVARELKEAK +PLEAGS ++IGVLA N+   A FY +KLQS+GF
Sbjct: 180  QVSKGCSIHFLHMGECVARELKEAKLKPLEAGSPLRIGVLAANATLTAGFYQEKLQSEGF 239

Query: 932  EVVLPDKPTMEHAVLPALEALKKKDMEGAQNLLRIAIHLLLMRAVNTIVLASDELRNVLP 753
            EVVLPDK TMEH ++PA+ AL +KDMEGA+NLLRIA+ +LL+RAVNT++LASD++R++LP
Sbjct: 240  EVVLPDKATMEHTIIPAIGALNRKDMEGARNLLRIALQVLLVRAVNTVILASDDMRDLLP 299

Query: 752  PDDPLLKRCVDPMDALVRATISLGRTSQK 666
             +DPLLK+C+DPMDALVRATI   + ++K
Sbjct: 300  QNDPLLKKCIDPMDALVRATIKWAKAAEK 328


>emb|CAN68957.1| hypothetical protein VITISV_015733 [Vitis vinifera]
          Length = 330

 Score =  311 bits (796), Expect = 4e-82
 Identities = 167/326 (51%), Positives = 219/326 (67%), Gaps = 19/326 (5%)
 Frame = -2

Query: 1586 SFNTLGCPQVHVRNVNKKRAHHRTRTDPSLVVQVSPMVLQTEEGGELPKSNQIQGS---F 1416
            SF++L  P   + NV+K     RT  +P L V  S  +LQT+E G LP+S    GS    
Sbjct: 4    SFHSLKYPSHMMGNVHKHXILXRTMKNPILAVPPSSTLLQTDESGNLPESKNSSGSDAAS 63

Query: 1415 TSEERCRI------PXXXXXXXXXXSTLIFLEKYVWWSSRGGGDSAPFIVCSDPAIS--- 1263
            T+ +   +                 STL FL+K V WSS+ GGDS PF++CSDP ++   
Sbjct: 64   TNSDSASLFINQATTVGIIGGVSVDSTLNFLKKLVQWSSKDGGDSLPFVLCSDPVLNKQL 123

Query: 1262 -------IPCRSTSTCGKDKDDHYSIIEDLRQKRVFLEQSGARCIVMPCHVSHLWHSEVS 1104
                    P  ST      + DH  I+ +L+ KR FLE+SG +CIVMPCH+SH WH E+S
Sbjct: 124  LSHERSHFPLLSTKR-ESSRMDHTPIVGNLQSKRAFLERSGVQCIVMPCHISHSWHDEIS 182

Query: 1103 LGCSVPFLNIGDCVARELKEAKFRPLEAGSRVQIGVLADNSISMAVFYTKKLQSQGFEVV 924
             G SVPFL++G+CVARELK AK +PLEAGS ++IGVLA N+   A FY +KLQ +GFEVV
Sbjct: 183  RGXSVPFLHMGECVARELKNAKLKPLEAGSPLRIGVLATNATLTAGFYQEKLQREGFEVV 242

Query: 923  LPDKPTMEHAVLPALEALKKKDMEGAQNLLRIAIHLLLMRAVNTIVLASDELRNVLPPDD 744
            LPDK TMEH V+PA+EAL +KDMEGA+NLLRIA+ +LL+RAVNT++LASD++ ++LP DD
Sbjct: 243  LPDKATMEHTVIPAIEALNRKDMEGARNLLRIALQVLLVRAVNTVILASDDMHDLLPRDD 302

Query: 743  PLLKRCVDPMDALVRATISLGRTSQK 666
            PLLK+CVDPMDAL R+TI   ++ +K
Sbjct: 303  PLLKKCVDPMDALARSTIHWAQSVEK 328


>ref|XP_002303258.1| predicted protein [Populus trichocarpa] gi|222840690|gb|EEE78237.1|
            predicted protein [Populus trichocarpa]
          Length = 330

 Score =  310 bits (794), Expect = 7e-82
 Identities = 166/330 (50%), Positives = 222/330 (67%), Gaps = 15/330 (4%)
 Frame = -2

Query: 1610 LFDGVLKSSFNTLGCPQVHVRNVNKKRAHHRTRTDPSLVVQVSPMVLQTEEGGELPKSNQ 1431
            +FDG L   F+TL  P   + +VN  RA H++R  P L +  S ++L T+E G+ P S +
Sbjct: 1    MFDGSLAMPFHTLH-PCHLLGHVNTHRALHKSRLQPVLAIPPSSILLHTDESGKFPDSKK 59

Query: 1430 ---IQGSFTSEERCRIPXXXXXXXXXXST--LIFLEKYVWWSSRGGGDSAPFIVCSDPAI 1266
               ++G  +S+                    L FL+K V  SS+ G D  PF++CSDP +
Sbjct: 60   GSGLRGRDSSDSLLSQANTVGIIGGISVNSALNFLKKLVQGSSKEGKDCFPFVLCSDPVL 119

Query: 1265 ----------SIPCRSTSTCGKDKDDHYSIIEDLRQKRVFLEQSGARCIVMPCHVSHLWH 1116
                      S PC       K   DH +I E+L+ KRVFLE+SG +CIVMPCH+ H WH
Sbjct: 120  NKELLSHERNSCPCPRRHN-EKSPSDHSAIAENLQNKRVFLEKSGVQCIVMPCHILHSWH 178

Query: 1115 SEVSLGCSVPFLNIGDCVARELKEAKFRPLEAGSRVQIGVLADNSISMAVFYTKKLQSQG 936
             EVS GCS+PFL++G+CVARELKEAK +PLEAGS ++IG+LA N+   A FY +KLQ++G
Sbjct: 179  DEVSKGCSLPFLHMGECVARELKEAKLKPLEAGSPLRIGLLASNATLAAGFYQEKLQNEG 238

Query: 935  FEVVLPDKPTMEHAVLPALEALKKKDMEGAQNLLRIAIHLLLMRAVNTIVLASDELRNVL 756
            FEVVLPDK TMEH ++PA+EAL + DMEGAQNLLRIA+ +LL+RAVNT++LAS+E+R+VL
Sbjct: 239  FEVVLPDKATMEHTIIPAIEALDRNDMEGAQNLLRIALQVLLVRAVNTVILASEEMRDVL 298

Query: 755  PPDDPLLKRCVDPMDALVRATISLGRTSQK 666
            P DDPLLK+C+DPMDAL R+TI   + + K
Sbjct: 299  PEDDPLLKKCIDPMDALARSTIKWAQAADK 328


>ref|XP_002281753.1| PREDICTED: uncharacterized protein LOC100249822 [Vitis vinifera]
          Length = 305

 Score =  298 bits (762), Expect = 4e-78
 Identities = 157/300 (52%), Positives = 205/300 (68%), Gaps = 19/300 (6%)
 Frame = -2

Query: 1508 DPSLVVQVSPMVLQTEEGGELPKSNQIQGS---FTSEERCRI------PXXXXXXXXXXS 1356
            +P L V  S  +LQT+E G LP+S    GS    T+ +   +                 S
Sbjct: 3    NPILAVPPSSTLLQTDESGNLPESKNSSGSDAASTNSDSASLFINQATTVGIIGGVSVDS 62

Query: 1355 TLIFLEKYVWWSSRGGGDSAPFIVCSDPAIS----------IPCRSTSTCGKDKDDHYSI 1206
            TL FL+K V WSS+ GGDS PF++CSDP ++           P  ST      + DH  I
Sbjct: 63   TLNFLKKLVQWSSKDGGDSLPFVLCSDPVLNKQLLSHERSHFPLLSTKR-ESSRMDHTPI 121

Query: 1205 IEDLRQKRVFLEQSGARCIVMPCHVSHLWHSEVSLGCSVPFLNIGDCVARELKEAKFRPL 1026
            + +L+ KR FLE+SG +CIVMPCH+SH WH E+S G SVPFL++G+CVARELK AK +PL
Sbjct: 122  VGNLQSKRAFLERSGVQCIVMPCHISHSWHDEISRGSSVPFLHMGECVARELKNAKLKPL 181

Query: 1025 EAGSRVQIGVLADNSISMAVFYTKKLQSQGFEVVLPDKPTMEHAVLPALEALKKKDMEGA 846
            EAGS ++IGVLA N+   A FY +KLQ +GFEVVLPDK TMEH V+PA+EA  +KDMEGA
Sbjct: 182  EAGSPLRIGVLATNATLTAGFYQEKLQREGFEVVLPDKATMEHTVIPAIEAFNRKDMEGA 241

Query: 845  QNLLRIAIHLLLMRAVNTIVLASDELRNVLPPDDPLLKRCVDPMDALVRATISLGRTSQK 666
            +NLLRIA+ +LL+RAVNT++LASD++ ++LP DDPLLK+CVDPMDAL R+TI   ++ +K
Sbjct: 242  RNLLRIALQVLLVRAVNTVILASDDMHDLLPRDDPLLKKCVDPMDALARSTIHWAQSVEK 301


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