BLASTX nr result

ID: Bupleurum21_contig00018369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018369
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521346.1| hypothetical protein RCOM_0653450 [Ricinus c...   125   1e-26
ref|XP_002304143.1| predicted protein [Populus trichocarpa] gi|2...   120   3e-25
ref|XP_002276086.2| PREDICTED: uncharacterized protein LOC100246...   117   2e-24
emb|CAN69469.1| hypothetical protein VITISV_042556 [Vitis vinifera]   117   2e-24
ref|XP_002299596.1| predicted protein [Populus trichocarpa] gi|2...   117   3e-24

>ref|XP_002521346.1| hypothetical protein RCOM_0653450 [Ricinus communis]
           gi|223539424|gb|EEF41014.1| hypothetical protein
           RCOM_0653450 [Ricinus communis]
          Length = 426

 Score =  125 bits (314), Expect = 1e-26
 Identities = 98/283 (34%), Positives = 139/283 (49%), Gaps = 30/283 (10%)
 Frame = -3

Query: 774 IEDWIEKKKTSEKIVKVSEKYAGFNQGCQRRNGEKYXXXXXXXXXXXXXXXXXXXXXXXX 595
           IE W+E+K + EK+    +  A F++    R    +                        
Sbjct: 70  IEKWMEEKVSYEKVAIRRKSMADFDK-INTRKDFTHRPVLLNSSSTSSESSSGGGFSSSE 128

Query: 594 XXXNYGVSSRSSSTNY---RPKPIKTSSDSK------MINNSHD-----EKRDHEGGGVV 457
               YG+SSRSSSTNY   RPKPI+TS+ ++      M N+ H        + HEG  V 
Sbjct: 129 SESVYGLSSRSSSTNYTMQRPKPIRTSASARPVDELGMYNHHHPTTQKPNNKHHEGSFV- 187

Query: 456 KRSKLKALKIYGDLKKVKQPISPGAKLASFLNSIF--ATAKKDKNTRPNSLQE------- 304
            ++K KALKIYGDLKKVKQPISPG +LASFLNS+F    AKK K + P+  +E       
Sbjct: 188 -KTKSKALKIYGDLKKVKQPISPGGRLASFLNSLFTAGNAKKAKISSPSGYEERTKFKSE 246

Query: 303 ---SPAXXXXXXXXXXXXXXXXXXXXXXXSVRFSPVSVIVDEDCQTRGHKPL----QRGH 145
              + +                       SVRF PVSVIV ED +  GHK L    Q   
Sbjct: 247 QTSTCSSASSFSRSCLSKTPSSRGNGTKRSVRFYPVSVIVGEDSRPCGHKTLYGTDQENP 306

Query: 144 DVQTLAHTDLRDCINEDIMYRIRGKNQCVKDAARELLKNYERK 16
            + T+  T  R   NE++ + +  +++ V++ AR+LL+N+++K
Sbjct: 307 SLMTI--TTTRVPTNEELKFHVMNESRRVEEVARDLLRNFQKK 347


>ref|XP_002304143.1| predicted protein [Populus trichocarpa] gi|222841575|gb|EEE79122.1|
           predicted protein [Populus trichocarpa]
          Length = 453

 Score =  120 bits (301), Expect = 3e-25
 Identities = 105/307 (34%), Positives = 141/307 (45%), Gaps = 52/307 (16%)
 Frame = -3

Query: 774 IEDWIEKKKTSEKIVKVSEKYAGFNQGCQRRNGEKYXXXXXXXXXXXXXXXXXXXXXXXX 595
           I+ W+EKK + EK+    +  A F    + ++ +                          
Sbjct: 77  IDKWMEKKVSHEKVAVRRKSMADF----ENKSRKDVDSVLLNSSSTSSESSCGGGFSSSE 132

Query: 594 XXXNYGV-SSRSSSTNY---RPKPIKTS-----------SDSKMINNSHDEKRD------ 478
               YGV SSRSS+T+Y   RPKPI+TS            D   I+  H+ +R+      
Sbjct: 133 SESIYGVNSSRSSTTSYTMQRPKPIRTSISARPEKYQRREDHHQIDMYHNHERNYAPNQK 192

Query: 477 --HEGGGVVKRSKLKALKIYGDLKKVKQPISPGAKLASFLNSIF--ATAKKDKNTRPNSL 310
             HEG  V  ++K KALKIYGDLKKVKQPISPG +LASFLNS+F    AKK K +     
Sbjct: 193 AKHEGSFV--KTKSKALKIYGDLKKVKQPISPGGRLASFLNSLFTAGNAKKAKISTSGGR 250

Query: 309 QE----------------SPAXXXXXXXXXXXXXXXXXXXXXXXSVRFSPVSVIVDEDCQ 178
            E                S +                       SVRF PVSVIVDEDC+
Sbjct: 251 YEERKLKSEQASTCSSASSFSRSCLSKTPSSRGGKLSSNNGAKRSVRFYPVSVIVDEDCR 310

Query: 177 TRGHKPLQRGHDVQTLAH--------TDLRDCI---NEDIMYRIRGKNQCVKDAARELLK 31
             GHK L  G D Q L+         TD R+ +    E++ + +  +N+ +++ AR LLK
Sbjct: 311 PCGHKSLY-GSDCQELSSTLVAATVTTDTRNNVPTSGEELKFHVTNENRRIEEVARNLLK 369

Query: 30  NYERKVE 10
           NY+RK E
Sbjct: 370 NYQRKKE 376


>ref|XP_002276086.2| PREDICTED: uncharacterized protein LOC100246362 [Vitis vinifera]
          Length = 403

 Score =  117 bits (294), Expect = 2e-24
 Identities = 104/284 (36%), Positives = 132/284 (46%), Gaps = 29/284 (10%)
 Frame = -3

Query: 774 IEDWIEKKKTSEKIVKVSEKYAGFNQGCQRRNGEKYXXXXXXXXXXXXXXXXXXXXXXXX 595
           IE W+EKK  SEK+V   +  A F +  +      +                        
Sbjct: 77  IEKWMEKK-VSEKVVVRRKSMADFERRSRNDRDSFFLNSTSSSSDSSSGGGFSSSE---- 131

Query: 594 XXXNYGVSSRSSSTNYRPKPIKTSSDSK-------MINNSHD------EKRDHEGGGVVK 454
                   S  SS   RPKPI+TS+          M  N HD      +K  HEGG V  
Sbjct: 132 ------AESVRSSGFQRPKPIRTSTSVPPENHHHLMFENYHDRNYIASQKPKHEGGFV-- 183

Query: 453 RSKLKALKIYGDLKKVKQPISPGAKLASFLNSIFAT--AKKDK-------------NTRP 319
           ++K +ALKIYGDLKKVKQPISPG +LASFLNS+F T  AKK K              +  
Sbjct: 184 KTKSRALKIYGDLKKVKQPISPGGRLASFLNSLFTTGTAKKAKISSSEDSTPERKSKSGH 243

Query: 318 NSLQESPAXXXXXXXXXXXXXXXXXXXXXXXSVRFSPVSVIVDEDCQTRGHKPL-QRGHD 142
            S   S +                       SVRF PVSVIVDEDC+  GHK L + G  
Sbjct: 244 TSTCSSASSFSRSCLSKTPSSRSKLSNGTKRSVRFYPVSVIVDEDCRPCGHKCLYEDGKP 303

Query: 141 VQTLAHTDLRDCINEDIMYRIRGKNQCVKDAARELLKNYERKVE 10
           ++T+      + INEDI   I   N+ V++AAR+LLKNY++K E
Sbjct: 304 IRTVT-----NFINEDIKLNI-DHNRRVEEAARDLLKNYQKKNE 341


>emb|CAN69469.1| hypothetical protein VITISV_042556 [Vitis vinifera]
          Length = 403

 Score =  117 bits (294), Expect = 2e-24
 Identities = 104/284 (36%), Positives = 132/284 (46%), Gaps = 29/284 (10%)
 Frame = -3

Query: 774 IEDWIEKKKTSEKIVKVSEKYAGFNQGCQRRNGEKYXXXXXXXXXXXXXXXXXXXXXXXX 595
           IE W+EKK  SEK+V   +  A F +  +      +                        
Sbjct: 77  IEKWMEKK-VSEKVVVRRKSMADFERRSRNDRDSFFLNSTSSSSDSSSGGGFSSSE---- 131

Query: 594 XXXNYGVSSRSSSTNYRPKPIKTSSDSK-------MINNSHD------EKRDHEGGGVVK 454
                   S  SS   RPKPI+TS+          M  N HD      +K  HEGG V  
Sbjct: 132 ------AESVRSSGFQRPKPIRTSTSVPPENHHHLMFENYHDRNYIASQKPKHEGGFV-- 183

Query: 453 RSKLKALKIYGDLKKVKQPISPGAKLASFLNSIFAT--AKKDK-------------NTRP 319
           ++K +ALKIYGDLKKVKQPISPG +LASFLNS+F T  AKK K              +  
Sbjct: 184 KTKSRALKIYGDLKKVKQPISPGGRLASFLNSLFTTGTAKKAKISSSEDSTPERKSKSGH 243

Query: 318 NSLQESPAXXXXXXXXXXXXXXXXXXXXXXXSVRFSPVSVIVDEDCQTRGHKPL-QRGHD 142
            S   S +                       SVRF PVSVIVDEDC+  GHK L + G  
Sbjct: 244 TSTCSSASSFSRSCLSKTPSSRGKLSNGTKRSVRFYPVSVIVDEDCRPCGHKCLYEDGKP 303

Query: 141 VQTLAHTDLRDCINEDIMYRIRGKNQCVKDAARELLKNYERKVE 10
           ++T+      + INEDI   I   N+ V++AAR+LLKNY++K E
Sbjct: 304 IRTVT-----NFINEDIKLNI-DHNRRVEEAARDLLKNYQKKNE 341


>ref|XP_002299596.1| predicted protein [Populus trichocarpa] gi|222846854|gb|EEE84401.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score =  117 bits (293), Expect = 3e-24
 Identities = 94/232 (40%), Positives = 118/232 (50%), Gaps = 41/232 (17%)
 Frame = -3

Query: 582 YGV-SSRSSSTNY---RPKPIKTS-----------SDSKMINNSHDEKRD--------HE 472
           YGV SSRSS+T+Y   RPKPI+TS            D   I+  H+ +R+        HE
Sbjct: 101 YGVNSSRSSTTSYTMERPKPIRTSISARPEKYQRREDHHQIDMYHNHERNYAPNQKVKHE 160

Query: 471 GGGVVKRSKLKALKIYGDLKKVKQPISPGAKLASFLNSIFAT--AKKDKNTRPNSLQE-- 304
           G  V  ++K KALKIYGDLKKVKQPISPG +LASFLNS+F T  AKK K T P    E  
Sbjct: 161 GSFV--KTKSKALKIYGDLKKVKQPISPGRRLASFLNSLFTTGNAKKAKITTPGGSYEER 218

Query: 303 --------------SPAXXXXXXXXXXXXXXXXXXXXXXXSVRFSPVSVIVDEDCQTRGH 166
                         S +                       SVRF PVSVIVDEDC+  GH
Sbjct: 219 KLKSEQASTCSSASSFSRSCLSKTPSSRGGKLSSNNGAKRSVRFYPVSVIVDEDCRPCGH 278

Query: 165 KPLQRGHDVQTLAHTDLRDCINEDIMYRIRGKNQCVKDAARELLKNYERKVE 10
           K L  G D Q ++   L           +  +N+ +++ AR+LLKNY++K E
Sbjct: 279 KNLY-GSDRQEMSKLKL----------HVMNENRRIEEVARDLLKNYQKKKE 319


Top