BLASTX nr result

ID: Bupleurum21_contig00018368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018368
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280587.1| PREDICTED: uncharacterized protein At1g01500...    69   5e-10
ref|XP_004143843.1| PREDICTED: uncharacterized protein LOC101203...    67   2e-09
ref|NP_194142.1| uncharacterized protein [Arabidopsis thaliana] ...    58   7e-07
dbj|BAC42625.1| unknown protein [Arabidopsis thaliana]                 56   3e-06
ref|XP_002867680.1| hypothetical protein ARALYDRAFT_914182 [Arab...    56   4e-06

>ref|XP_002280587.1| PREDICTED: uncharacterized protein At1g01500-like [Vitis vinifera]
          Length = 250

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/58 (53%), Positives = 45/58 (77%)
 Frame = +1

Query: 172 YLPRINGTPLEINHSTIKPNSPAFITLHRVIDSYSTQVVSFSTRERVKASQGARFEVY 345
           YLPRING+PLE+  S I+P+S +F+TLHR++ + +     F++RERV+ S+G RFEVY
Sbjct: 44  YLPRINGSPLEVADSKIRPDSASFVTLHRIVSADAV----FASRERVRTSEGVRFEVY 97


>ref|XP_004143843.1| PREDICTED: uncharacterized protein LOC101203014 [Cucumis sativus]
           gi|449509396|ref|XP_004163576.1| PREDICTED:
           uncharacterized protein LOC101227908 [Cucumis sativus]
          Length = 256

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/61 (54%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
 Frame = +1

Query: 169 YYLPRINGTPLEINHSTIKPNSPAFITLHRVI--DSYSTQVVSFSTRERVKASQGARFEV 342
           +YLPRI+ T LEI+   I+P+SPAF+TLHRV+   S   + V F +RERV+AS+G +F+V
Sbjct: 40  FYLPRIDETDLEIDGLKIRPDSPAFVTLHRVVSPSSRMKKGVEFGSRERVRASEGVQFQV 99

Query: 343 Y 345
           Y
Sbjct: 100 Y 100


>ref|NP_194142.1| uncharacterized protein [Arabidopsis thaliana]
           gi|2262106|gb|AAB63614.1| hypothetical protein
           [Arabidopsis thaliana] gi|5668639|emb|CAB51654.1|
           putative protein [Arabidopsis thaliana]
           gi|7269260|emb|CAB81329.1| putative protein [Arabidopsis
           thaliana] gi|332659451|gb|AEE84851.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 250

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/58 (50%), Positives = 39/58 (67%)
 Frame = +1

Query: 172 YLPRINGTPLEINHSTIKPNSPAFITLHRVIDSYSTQVVSFSTRERVKASQGARFEVY 345
           Y PRIN    E++ S I+P+SPAF+TLHRV+       V + +RERV+  +G RFEVY
Sbjct: 42  YPPRINEAAFELDGSKIRPDSPAFVTLHRVVKGGD---VIYGSRERVRVWEGIRFEVY 96


>dbj|BAC42625.1| unknown protein [Arabidopsis thaliana]
          Length = 250

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/58 (48%), Positives = 38/58 (65%)
 Frame = +1

Query: 172 YLPRINGTPLEINHSTIKPNSPAFITLHRVIDSYSTQVVSFSTRERVKASQGARFEVY 345
           Y PRIN    E++ S I+P+SPAF+TLHRV+         + +RERV+  +G RFEVY
Sbjct: 42  YPPRINEAAFELDGSKIRPDSPAFVTLHRVVKGGDE---IYGSRERVRVWEGIRFEVY 96


>ref|XP_002867680.1| hypothetical protein ARALYDRAFT_914182 [Arabidopsis lyrata subsp.
           lyrata] gi|297313516|gb|EFH43939.1| hypothetical protein
           ARALYDRAFT_914182 [Arabidopsis lyrata subsp. lyrata]
          Length = 251

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 28/58 (48%), Positives = 39/58 (67%)
 Frame = +1

Query: 172 YLPRINGTPLEINHSTIKPNSPAFITLHRVIDSYSTQVVSFSTRERVKASQGARFEVY 345
           Y PRIN    E++ S I+P+SPAF+TL+RV+       V + +RERV+  +G RFEVY
Sbjct: 42  YPPRINEAAFELDGSKIRPDSPAFVTLYRVVKGGD---VIYGSRERVRVWEGIRFEVY 96


Top