BLASTX nr result
ID: Bupleurum21_contig00018362
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00018362
(853 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003633416.1| PREDICTED: pentatricopeptide repeat-containi... 239 4e-61
emb|CBI29633.3| unnamed protein product [Vitis vinifera] 239 4e-61
ref|XP_002306233.1| predicted protein [Populus trichocarpa] gi|2... 236 6e-60
ref|XP_002328164.1| predicted protein [Populus trichocarpa] gi|2... 236 6e-60
gb|AFK46902.1| unknown [Medicago truncatula] 234 1e-59
>ref|XP_003633416.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
mitochondrial-like [Vitis vinifera]
Length = 551
Score = 239 bits (611), Expect = 4e-61
Identities = 120/204 (58%), Positives = 144/204 (70%)
Frame = +2
Query: 2 EKWPLVVLHKKRVRSLYEDASNRELLDEWTEKGVLYGTPYGSNDDWYWLYATVKLKCFLV 181
+K PLV+LH KR R L E+ASNR+LL EW +GVLY TP GSNDDWYWLYA VKLKC LV
Sbjct: 347 KKRPLVILHNKRFRKLSENASNRKLLQEWLTQGVLYTTPNGSNDDWYWLYAAVKLKCLLV 406
Query: 182 TNDEMRDHIFELIGADFFVKWKERHQVRYSFVKGVVELHMPPAYSVVIQESENGAWHVPV 361
TNDEMRDHIFEL+G+ FF+KWKERHQVRY+FVKG V+L MPP+YS+ IQES G WHVPV
Sbjct: 407 TNDEMRDHIFELLGSSFFLKWKERHQVRYTFVKGNVKLLMPPSYSLFIQESVKGTWHVPV 466
Query: 362 ARECNNESSRTWLCISRSVVPNAYDGSTKSLESSELTKSHISSNWCQPCNGPTLSNGSKD 541
A E ++ES RTW CI+R ++ +LE+ E+ + C L NGS +
Sbjct: 467 ASESSDESLRTWHCITRPSSHELNGKASVNLETCEIDRQEQCDFKLSSCKSEGLRNGSCE 526
Query: 542 TYNLCSDTTITGKRKERSQSPSRS 613
TT+TGKRK+RS SPS S
Sbjct: 527 N----KTTTMTGKRKDRSPSPSPS 546
>emb|CBI29633.3| unnamed protein product [Vitis vinifera]
Length = 267
Score = 239 bits (611), Expect = 4e-61
Identities = 120/204 (58%), Positives = 144/204 (70%)
Frame = +2
Query: 2 EKWPLVVLHKKRVRSLYEDASNRELLDEWTEKGVLYGTPYGSNDDWYWLYATVKLKCFLV 181
+K PLV+LH KR R L E+ASNR+LL EW +GVLY TP GSNDDWYWLYA VKLKC LV
Sbjct: 63 KKRPLVILHNKRFRKLSENASNRKLLQEWLTQGVLYTTPNGSNDDWYWLYAAVKLKCLLV 122
Query: 182 TNDEMRDHIFELIGADFFVKWKERHQVRYSFVKGVVELHMPPAYSVVIQESENGAWHVPV 361
TNDEMRDHIFEL+G+ FF+KWKERHQVRY+FVKG V+L MPP+YS+ IQES G WHVPV
Sbjct: 123 TNDEMRDHIFELLGSSFFLKWKERHQVRYTFVKGNVKLLMPPSYSLFIQESVKGTWHVPV 182
Query: 362 ARECNNESSRTWLCISRSVVPNAYDGSTKSLESSELTKSHISSNWCQPCNGPTLSNGSKD 541
A E ++ES RTW CI+R ++ +LE+ E+ + C L NGS +
Sbjct: 183 ASESSDESLRTWHCITRPSSHELNGKASVNLETCEIDRQEQCDFKLSSCKSEGLRNGSCE 242
Query: 542 TYNLCSDTTITGKRKERSQSPSRS 613
TT+TGKRK+RS SPS S
Sbjct: 243 N----KTTTMTGKRKDRSPSPSPS 262
>ref|XP_002306233.1| predicted protein [Populus trichocarpa] gi|222849197|gb|EEE86744.1|
predicted protein [Populus trichocarpa]
Length = 557
Score = 236 bits (601), Expect = 6e-60
Identities = 119/209 (56%), Positives = 152/209 (72%), Gaps = 7/209 (3%)
Frame = +2
Query: 2 EKWPLVVLHKKRVRSLYEDASNRELLDEWTEKGVLYGTPYGSNDDWYWLYATVKLKCFLV 181
+K PLV+LH KR+R+L ++ S REL+ EW EK VLY TP+GSNDDWYWLYA VKL+C LV
Sbjct: 350 KKGPLVILHNKRLRALLQNPSTRELIQEWIEKDVLYTTPHGSNDDWYWLYAAVKLRCLLV 409
Query: 182 TNDEMRDHIFELIGADFFVKWKERHQVRYSFVKGVVELHMPPAYSVVIQESENGAWHVPV 361
TNDEMRDHIFEL+G+DFFVKWKERHQVRY+FVKG +EL MPP +S+VIQESENG+WHVPV
Sbjct: 410 TNDEMRDHIFELLGSDFFVKWKERHQVRYTFVKGNLELQMPPLFSIVIQESENGSWHVPV 469
Query: 362 ARECNNESSRTWLCISRSVVPNAYDGSTKSLESSELTKSHISSNWCQPCNGPTLSN---- 529
A + N+S ++WLC+SR +A ++ ES + S +S +L++
Sbjct: 470 AGD-GNDSPQSWLCVSRPRSCDALKEASCMEESKDSNDSRCNSKLPTFGRPESLASCKHK 528
Query: 530 -GSKDTYNLCSD--TTITGKRKERSQSPS 607
S+D++ D T +TGKRKERS SPS
Sbjct: 529 LHSRDSFQESDDKITALTGKRKERSPSPS 557
>ref|XP_002328164.1| predicted protein [Populus trichocarpa] gi|222837679|gb|EEE76044.1|
predicted protein [Populus trichocarpa]
Length = 557
Score = 236 bits (601), Expect = 6e-60
Identities = 118/209 (56%), Positives = 153/209 (73%), Gaps = 7/209 (3%)
Frame = +2
Query: 2 EKWPLVVLHKKRVRSLYEDASNRELLDEWTEKGVLYGTPYGSNDDWYWLYATVKLKCFLV 181
+K PL++LH KR+R+L ++ S REL+ EW EK VLY TP+GSNDDWYWLYA VKL+C+LV
Sbjct: 350 KKRPLIILHNKRLRALLQNPSTRELIQEWIEKDVLYTTPHGSNDDWYWLYAAVKLRCWLV 409
Query: 182 TNDEMRDHIFELIGADFFVKWKERHQVRYSFVKGVVELHMPPAYSVVIQESENGAWHVPV 361
TNDEMRDHIFEL+G+DFFVKWKERHQVRY+FVKG +EL MPP +S+VIQESENG+WHVPV
Sbjct: 410 TNDEMRDHIFELLGSDFFVKWKERHQVRYTFVKGNLELQMPPLFSIVIQESENGSWHVPV 469
Query: 362 ARECNNESSRTWLCISRSVVPNAYDGSTKSLESSELTKSHISSNWCQPCNGPTLSN---- 529
A + N+S ++WLC+SR +A ++ ES + S +S +L++
Sbjct: 470 AGD-GNDSPQSWLCVSRPSSCDALKEASCMEESKDSNDSRCNSKLPTFGRPESLASCKHK 528
Query: 530 -GSKDTYNLCSD--TTITGKRKERSQSPS 607
S+D++ D T +TGKRKERS SPS
Sbjct: 529 LHSRDSFQESDDKITALTGKRKERSPSPS 557
>gb|AFK46902.1| unknown [Medicago truncatula]
Length = 392
Score = 234 bits (598), Expect = 1e-59
Identities = 116/197 (58%), Positives = 147/197 (74%)
Frame = +2
Query: 5 KWPLVVLHKKRVRSLYEDASNRELLDEWTEKGVLYGTPYGSNDDWYWLYATVKLKCFLVT 184
KWPLVVLH KRV+ L E+ S+R+L++EW + GVLY TP GSNDDWYWLYATVKL+C LVT
Sbjct: 198 KWPLVVLHNKRVKGLMENPSSRKLVEEWMKNGVLYTTPNGSNDDWYWLYATVKLRCLLVT 257
Query: 185 NDEMRDHIFELIGADFFVKWKERHQVRYSFVKGVVELHMPPAYSVVIQESENGAWHVPVA 364
NDEMRDHIFEL+G++FF +WKERHQV Y+FVKG ++L MPP YS+VIQESE G+WHVP+A
Sbjct: 258 NDEMRDHIFELLGSNFFNQWKERHQVHYTFVKGNLKLQMPPPYSLVIQESEKGSWHVPLA 317
Query: 365 RECNNESSRTWLCISRSVVPNAYDGSTKSLESSELTKSHISSNWCQPCNGPTLSNGSKDT 544
+ +NESS+ WLCI+R+ +A D +T S +HI + Q LS S+
Sbjct: 318 VDTSNESSKPWLCITRA---SADDATTASNGVDTSGNNHIHIDQPQKIADEVLSLDSQVI 374
Query: 545 YNLCSDTTITGKRKERS 595
N + T++TGKRKERS
Sbjct: 375 EN--NSTSVTGKRKERS 389