BLASTX nr result

ID: Bupleurum21_contig00018359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018359
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19201.3| unnamed protein product [Vitis vinifera]              164   7e-39
ref|XP_002285745.1| PREDICTED: 39S ribosomal protein L41-A, mito...   164   7e-39
ref|NP_001236345.1| uncharacterized protein LOC100306274 [Glycin...   162   2e-38
ref|XP_002531113.1| conserved hypothetical protein [Ricinus comm...   160   8e-38
ref|XP_004135839.1| PREDICTED: 39S ribosomal protein L41-A, mito...   159   3e-37

>emb|CBI19201.3| unnamed protein product [Vitis vinifera]
          Length = 175

 Score =  164 bits (415), Expect = 7e-39
 Identities = 79/92 (85%), Positives = 85/92 (92%)
 Frame = -3

Query: 287 MALGLILGIGRAFRRKRASSLDILSSKRGPRDYYKGKNCKPTGFHTRKGGYVVVQEKLPN 108
           MALGLILGIGRAFRRKR SSLDILSSKR PRDYYKGKNCKPTGFHTRKGGYV++QEKLPN
Sbjct: 79  MALGLILGIGRAFRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLMQEKLPN 138

Query: 107 YVVPDLTDFKLKPYVSQCAVEGQTSGAADAAK 12
           YVVPDLTDFKLKPYVSQC  E +T+ A +AA+
Sbjct: 139 YVVPDLTDFKLKPYVSQCPREVKTNEATEAAQ 170


>ref|XP_002285745.1| PREDICTED: 39S ribosomal protein L41-A, mitochondrial [Vitis
           vinifera] gi|147843318|emb|CAN82662.1| hypothetical
           protein VITISV_004928 [Vitis vinifera]
          Length = 97

 Score =  164 bits (415), Expect = 7e-39
 Identities = 79/92 (85%), Positives = 85/92 (92%)
 Frame = -3

Query: 287 MALGLILGIGRAFRRKRASSLDILSSKRGPRDYYKGKNCKPTGFHTRKGGYVVVQEKLPN 108
           MALGLILGIGRAFRRKR SSLDILSSKR PRDYYKGKNCKPTGFHTRKGGYV++QEKLPN
Sbjct: 1   MALGLILGIGRAFRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLMQEKLPN 60

Query: 107 YVVPDLTDFKLKPYVSQCAVEGQTSGAADAAK 12
           YVVPDLTDFKLKPYVSQC  E +T+ A +AA+
Sbjct: 61  YVVPDLTDFKLKPYVSQCPREVKTNEATEAAQ 92


>ref|NP_001236345.1| uncharacterized protein LOC100306274 [Glycine max]
           gi|255628073|gb|ACU14381.1| unknown [Glycine max]
          Length = 92

 Score =  162 bits (411), Expect = 2e-38
 Identities = 78/92 (84%), Positives = 81/92 (88%)
 Frame = -3

Query: 287 MALGLILGIGRAFRRKRASSLDILSSKRGPRDYYKGKNCKPTGFHTRKGGYVVVQEKLPN 108
           M LGLILGIGRAFRRKR SSLDILSSKR PR YYKGKNCKPTGFHTRKGGYVV+QEKLPN
Sbjct: 1   MPLGLILGIGRAFRRKRPSSLDILSSKRAPRGYYKGKNCKPTGFHTRKGGYVVMQEKLPN 60

Query: 107 YVVPDLTDFKLKPYVSQCAVEGQTSGAADAAK 12
           YVVPDLTDFKLKPY SQC +E  TS A+  AK
Sbjct: 61  YVVPDLTDFKLKPYASQCPIEANTSEASQTAK 92


>ref|XP_002531113.1| conserved hypothetical protein [Ricinus communis]
           gi|223529309|gb|EEF31278.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 92

 Score =  160 bits (406), Expect = 8e-38
 Identities = 77/92 (83%), Positives = 83/92 (90%)
 Frame = -3

Query: 287 MALGLILGIGRAFRRKRASSLDILSSKRGPRDYYKGKNCKPTGFHTRKGGYVVVQEKLPN 108
           MALGLILGIGRAFRRKR S+LDILSSKR P DYYKGKNCKPTGFHTRKGGYV+V EKLPN
Sbjct: 1   MALGLILGIGRAFRRKRTSALDILSSKRAPHDYYKGKNCKPTGFHTRKGGYVIVPEKLPN 60

Query: 107 YVVPDLTDFKLKPYVSQCAVEGQTSGAADAAK 12
           YVVPDLTDFKLKPYVSQCA + +T+ A+ A K
Sbjct: 61  YVVPDLTDFKLKPYVSQCATQIKTTEASAAKK 92


>ref|XP_004135839.1| PREDICTED: 39S ribosomal protein L41-A, mitochondrial-like [Cucumis
           sativus] gi|449490988|ref|XP_004158767.1| PREDICTED: 39S
           ribosomal protein L41-A, mitochondrial-like [Cucumis
           sativus]
          Length = 93

 Score =  159 bits (401), Expect = 3e-37
 Identities = 76/92 (82%), Positives = 82/92 (89%)
 Frame = -3

Query: 287 MALGLILGIGRAFRRKRASSLDILSSKRGPRDYYKGKNCKPTGFHTRKGGYVVVQEKLPN 108
           MALGLILG+GR  RRKR SSLDILSSKR PRDYYKGKNCKPTGFHTRKGGYVVV EKLPN
Sbjct: 1   MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60

Query: 107 YVVPDLTDFKLKPYVSQCAVEGQTSGAADAAK 12
           YVVPDL+DFKLKPYVSQC +E +TS   ++AK
Sbjct: 61  YVVPDLSDFKLKPYVSQCPIELKTSDNNESAK 92


Top