BLASTX nr result

ID: Bupleurum21_contig00018338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018338
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA94947.1| AT hook motif-containing protein, putative [Oryza...   275   4e-72
gb|ABA95236.1| AT hook motif-containing protein, putative, expre...   275   4e-72
gb|AAU44208.1| unknown protein [Oryza sativa Japonica Group]          275   4e-72
gb|AAV44035.1| putative helicase [Oryza sativa Japonica Group]        274   1e-71
ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   269   4e-70

>gb|ABA94947.1| AT hook motif-containing protein, putative [Oryza sativa Japonica
            Group]
          Length = 1682

 Score =  275 bits (704), Expect = 4e-72
 Identities = 127/220 (57%), Positives = 160/220 (72%)
 Frame = +1

Query: 1    GDIDASTIGKRIVLPSSFTGSPRYMQQNYQDCMAVCRRFGSPDLFITFTCNPQWPEIKEF 180
            GD  A  +GKRI+LPSSFTGSPRY  QNYQD MA+CR  G PDLF+TFTCN  WPEI+  
Sbjct: 634  GDTRAEQVGKRILLPSSFTGSPRYKAQNYQDAMAICRWAGYPDLFVTFTCNAAWPEIQNM 693

Query: 181  CDKIPQCNPANRPDIIARVFKIKLDLLLADLTDNHVLGKVIGVAYTIEFQKRGLPHAHII 360
             D+I    P++RPDI+ RVF IKL  L+ D+ D    GK + + YTIEFQKRGLPHAHI+
Sbjct: 694  LDEIGVQKPSDRPDIVDRVFHIKLRELMTDIKDKQYFGKTLAIIYTIEFQKRGLPHAHIL 753

Query: 361  VWLDECDKCHSTDEINELICAEIPDKTTDPIGYEAVSKFMIHGPCGSYNRNSPCMRDGKC 540
            ++LD+ DKC    EI+ +I AEIPDK  D  G+EAV  FM+HGPCG    NSPCM + KC
Sbjct: 754  IFLDKKDKCPDASEIDRIISAEIPDKEEDREGFEAVENFMMHGPCGEEKSNSPCMIENKC 813

Query: 541  TKFYPKEFRNETTVDTNGYPVYRRRDDKRTIQLKDVEVDN 660
             + +PK+F +ETTVD +G+P YRRRD+ R I+  +V++DN
Sbjct: 814  IRNFPKKFHSETTVDEDGFPTYRRRDNGRYIEKGNVKLDN 853


>gb|ABA95236.1| AT hook motif-containing protein, putative, expressed [Oryza sativa
            Japonica Group]
          Length = 1682

 Score =  275 bits (704), Expect = 4e-72
 Identities = 127/220 (57%), Positives = 160/220 (72%)
 Frame = +1

Query: 1    GDIDASTIGKRIVLPSSFTGSPRYMQQNYQDCMAVCRRFGSPDLFITFTCNPQWPEIKEF 180
            GD  A  +GKRI+LPSSFTGSPRY  QNYQD MA+CR  G PDLF+TFTCN  WPEI+  
Sbjct: 634  GDTRAEQVGKRILLPSSFTGSPRYKAQNYQDAMAICRWAGYPDLFVTFTCNAAWPEIQNM 693

Query: 181  CDKIPQCNPANRPDIIARVFKIKLDLLLADLTDNHVLGKVIGVAYTIEFQKRGLPHAHII 360
             D+I    P++RPDI+ RVF IKL  L+ D+ D    GK + + YTIEFQKRGLPHAHI+
Sbjct: 694  LDEIGVQKPSDRPDIVDRVFHIKLRELMTDIKDKQYFGKTLAIIYTIEFQKRGLPHAHIL 753

Query: 361  VWLDECDKCHSTDEINELICAEIPDKTTDPIGYEAVSKFMIHGPCGSYNRNSPCMRDGKC 540
            ++LD+ DKC    EI+ +I AEIPDK  D  G+EAV  FM+HGPCG    NSPCM + KC
Sbjct: 754  IFLDKKDKCPDASEIDRIISAEIPDKEEDREGFEAVENFMMHGPCGEAKSNSPCMIENKC 813

Query: 541  TKFYPKEFRNETTVDTNGYPVYRRRDDKRTIQLKDVEVDN 660
             + +PK+F +ETTVD +G+P YRRRD+ R I+  +V++DN
Sbjct: 814  IRNFPKKFHSETTVDEDGFPTYRRRDNGRYIEKGNVKLDN 853


>gb|AAU44208.1| unknown protein [Oryza sativa Japonica Group]
          Length = 1525

 Score =  275 bits (704), Expect = 4e-72
 Identities = 127/220 (57%), Positives = 160/220 (72%)
 Frame = +1

Query: 1    GDIDASTIGKRIVLPSSFTGSPRYMQQNYQDCMAVCRRFGSPDLFITFTCNPQWPEIKEF 180
            GD  A  +GKRI+LPSSFTGSPRY  QNYQD MA+CR  G PDLF+TFTCN  WPEI+  
Sbjct: 477  GDTRAEQVGKRILLPSSFTGSPRYKAQNYQDAMAICRWAGYPDLFVTFTCNAAWPEIQNM 536

Query: 181  CDKIPQCNPANRPDIIARVFKIKLDLLLADLTDNHVLGKVIGVAYTIEFQKRGLPHAHII 360
             D+I    P++RPDI+ RVF IKL  L+ D+ D    GK + + YTIEFQKRGLPHAHI+
Sbjct: 537  LDEIGVQKPSDRPDIVDRVFHIKLRELMTDIKDKQYFGKTLAIIYTIEFQKRGLPHAHIL 596

Query: 361  VWLDECDKCHSTDEINELICAEIPDKTTDPIGYEAVSKFMIHGPCGSYNRNSPCMRDGKC 540
            ++LD+ DKC    EI+ +I AEIPDK  D  G+EAV  FM+HGPCG    NSPCM + KC
Sbjct: 597  IFLDKKDKCPDASEIDRIISAEIPDKEEDREGFEAVENFMMHGPCGEAKSNSPCMIENKC 656

Query: 541  TKFYPKEFRNETTVDTNGYPVYRRRDDKRTIQLKDVEVDN 660
             + +PK+F +ETTVD +G+P YRRRD+ R I+  +V++DN
Sbjct: 657  IRNFPKKFHSETTVDEDGFPTYRRRDNGRYIEKGNVKLDN 696


>gb|AAV44035.1| putative helicase [Oryza sativa Japonica Group]
          Length = 1634

 Score =  274 bits (700), Expect = 1e-71
 Identities = 126/220 (57%), Positives = 159/220 (72%)
 Frame = +1

Query: 1    GDIDASTIGKRIVLPSSFTGSPRYMQQNYQDCMAVCRRFGSPDLFITFTCNPQWPEIKEF 180
            GD  A  +GKRI+LPSSFTG PRY  QNYQD MA+CR  G PDLF+TFTCN  WPEI+  
Sbjct: 586  GDTRADQVGKRILLPSSFTGGPRYKAQNYQDAMAICRWAGYPDLFVTFTCNAAWPEIQNM 645

Query: 181  CDKIPQCNPANRPDIIARVFKIKLDLLLADLTDNHVLGKVIGVAYTIEFQKRGLPHAHII 360
             D+I    P++RPDI+ RVF IKL  L+ D+ D    GK + + YTIEFQKRGLPHAHI+
Sbjct: 646  LDEIGVQKPSDRPDIVDRVFHIKLRELMTDIKDKQYFGKTLAIIYTIEFQKRGLPHAHIL 705

Query: 361  VWLDECDKCHSTDEINELICAEIPDKTTDPIGYEAVSKFMIHGPCGSYNRNSPCMRDGKC 540
            ++LD+ DKC    EI+ +I AEIPDK  D  G+EAV  FM+HGPCG    NSPCM + KC
Sbjct: 706  IFLDKKDKCPDASEIDRIISAEIPDKEEDREGFEAVENFMMHGPCGEAKSNSPCMIENKC 765

Query: 541  TKFYPKEFRNETTVDTNGYPVYRRRDDKRTIQLKDVEVDN 660
             + +PK+F +ETTVD +G+P YRRRD+ R I+  +V++DN
Sbjct: 766  IRNFPKKFHSETTVDEDGFPTYRRRDNGRYIEKGNVKLDN 805


>ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355507968|gb|AES89110.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 1558

 Score =  269 bits (687), Expect = 4e-70
 Identities = 122/220 (55%), Positives = 161/220 (73%)
 Frame = +1

Query: 1    GDIDASTIGKRIVLPSSFTGSPRYMQQNYQDCMAVCRRFGSPDLFITFTCNPQWPEIKEF 180
            GD  A+  GKRIVLPSSFTG PRYM QNYQD MA+CR FG+PD+F+TFT NP+WPEI+  
Sbjct: 356  GDTIAAATGKRIVLPSSFTGGPRYMVQNYQDAMAICRTFGNPDIFMTFTANPKWPEIQYM 415

Query: 181  CDKIPQCNPANRPDIIARVFKIKLDLLLADLTDNHVLGKVIGVAYTIEFQKRGLPHAHII 360
              KIP  +  +RPDI  RVFK+KLD L+  + +    GK+I   YTIEFQKRGLPHAHI+
Sbjct: 416  LQKIPGQSVDDRPDIKTRVFKMKLDQLMKHIVEGQYFGKIISAIYTIEFQKRGLPHAHIL 475

Query: 361  VWLDECDKCHSTDEINELICAEIPDKTTDPIGYEAVSKFMIHGPCGSYNRNSPCMRDGKC 540
            +WL   +K  + ++I+++I AE+P K  DP  + AV +FM+HGPCG  N N+PCM DG C
Sbjct: 476  LWLHPSNKYPTPEDIDKIITAEMPSKEDDPECFNAVKQFMLHGPCGDANINAPCMIDGIC 535

Query: 541  TKFYPKEFRNETTVDTNGYPVYRRRDDKRTIQLKDVEVDN 660
            ++ +PK F +ETT+D +G+P YRRRDD R ++  D+ +DN
Sbjct: 536  SRKFPKSFFDETTIDRDGFPTYRRRDDGRHVKKGDINLDN 575


Top