BLASTX nr result

ID: Bupleurum21_contig00018337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018337
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281791.2| PREDICTED: paired amphipathic helix protein ...   109   2e-22
emb|CBI35015.3| unnamed protein product [Vitis vinifera]              109   2e-22
ref|XP_002267856.2| PREDICTED: paired amphipathic helix protein ...   107   1e-21
emb|CBI32068.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_003618393.1| Paired amphipathic helix protein Sin3 [Medic...   104   8e-21

>ref|XP_002281791.2| PREDICTED: paired amphipathic helix protein Sin3-like 2-like [Vitis
            vinifera]
          Length = 1395

 Score =  109 bits (273), Expect = 2e-22
 Identities = 59/104 (56%), Positives = 78/104 (75%), Gaps = 3/104 (2%)
 Frame = -3

Query: 307  YLNDDFFSV-PNEKEFDGIILQRNKRAYADHDEFSALSIAMQDFIVVSGLECKMSCKTSK 131
            YL++DF S  P++KE  GI+LQRNK  Y   D+ SA  +AM+D  +V+GLECK++C +SK
Sbjct: 1292 YLHNDFLSSRPSKKEPLGIMLQRNKHKYGGLDDLSATCLAMEDVHLVNGLECKIACTSSK 1351

Query: 130  ISYVLDTEDFMYRVRRKRSKL--STLSCKDEARVERFHRFLATS 5
            ISYVLDTED+ +R R KR KL  S +S ++ ARVERFHRFL+ S
Sbjct: 1352 ISYVLDTEDYFFRTRWKRRKLTGSEVSQRNWARVERFHRFLSAS 1395


>emb|CBI35015.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  109 bits (273), Expect = 2e-22
 Identities = 59/104 (56%), Positives = 78/104 (75%), Gaps = 3/104 (2%)
 Frame = -3

Query: 307  YLNDDFFSV-PNEKEFDGIILQRNKRAYADHDEFSALSIAMQDFIVVSGLECKMSCKTSK 131
            YL++DF S  P++KE  GI+LQRNK  Y   D+ SA  +AM+D  +V+GLECK++C +SK
Sbjct: 1256 YLHNDFLSSRPSKKEPLGIMLQRNKHKYGGLDDLSATCLAMEDVHLVNGLECKIACTSSK 1315

Query: 130  ISYVLDTEDFMYRVRRKRSKL--STLSCKDEARVERFHRFLATS 5
            ISYVLDTED+ +R R KR KL  S +S ++ ARVERFHRFL+ S
Sbjct: 1316 ISYVLDTEDYFFRTRWKRRKLTGSEVSQRNWARVERFHRFLSAS 1359


>ref|XP_002267856.2| PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Vitis
            vinifera]
          Length = 1421

 Score =  107 bits (266), Expect = 1e-21
 Identities = 53/91 (58%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
 Frame = -3

Query: 307  YLNDDFFSVPNEKEFDGIILQRNKRAYADHDEFSALSIAMQDFIVVSGLECKMSCKTSKI 128
            YLN DF SV NEK+  GI L+RNKR YA  DEFS    AM+   VV+GLECK++C +SK+
Sbjct: 1307 YLNSDFLSVVNEKKKSGIFLRRNKRKYARGDEFSVACQAMEGLQVVNGLECKIACSSSKV 1366

Query: 127  SYVLDTEDFMYRVRRKR-SKLSTLSCKDEAR 38
            SYVLDTEDF++RVR+KR + +   SC D+A+
Sbjct: 1367 SYVLDTEDFLFRVRKKRKTSVRKSSCHDQAK 1397


>emb|CBI32068.3| unnamed protein product [Vitis vinifera]
          Length = 1445

 Score =  107 bits (266), Expect = 1e-21
 Identities = 53/91 (58%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
 Frame = -3

Query: 307  YLNDDFFSVPNEKEFDGIILQRNKRAYADHDEFSALSIAMQDFIVVSGLECKMSCKTSKI 128
            YLN DF SV NEK+  GI L+RNKR YA  DEFS    AM+   VV+GLECK++C +SK+
Sbjct: 1331 YLNSDFLSVVNEKKKSGIFLRRNKRKYARGDEFSVACQAMEGLQVVNGLECKIACSSSKV 1390

Query: 127  SYVLDTEDFMYRVRRKR-SKLSTLSCKDEAR 38
            SYVLDTEDF++RVR+KR + +   SC D+A+
Sbjct: 1391 SYVLDTEDFLFRVRKKRKTSVRKSSCHDQAK 1421


>ref|XP_003618393.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
            gi|355493408|gb|AES74611.1| Paired amphipathic helix
            protein Sin3 [Medicago truncatula]
          Length = 1404

 Score =  104 bits (259), Expect = 8e-21
 Identities = 57/110 (51%), Positives = 72/110 (65%), Gaps = 9/110 (8%)
 Frame = -3

Query: 307  YLNDDFFSV-PNEKEFDGIILQRNKRAYADHDEFSALSIAMQDFIVVSGLECKMSCKTSK 131
            YL++DF SV P +KE  GI+L+RNK  Y D DE SA+   M+D  VV+GLECK+SC +SK
Sbjct: 1294 YLHNDFLSVLPGKKEPHGILLERNKPKYGDLDELSAICAVMEDVKVVNGLECKISCNSSK 1353

Query: 130  ISYVLDTEDFMYRVRRKRSKLSTLSCKDEA--------RVERFHRFLATS 5
            ISYVLDT+DF +R RRKR   ST S             R ERF + +A+S
Sbjct: 1354 ISYVLDTQDFFFRPRRKRRTSSTTSSSSSTASSRSRREREERFRKLMASS 1403


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