BLASTX nr result

ID: Bupleurum21_contig00018325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018325
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315689.1| predicted protein [Populus trichocarpa] gi|2...   281   3e-74
ref|XP_002525395.1| conserved hypothetical protein [Ricinus comm...   281   5e-74
ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chlorop...   271   3e-71
gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo]         270   1e-70
ref|XP_004155360.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa...   268   4e-70

>ref|XP_002315689.1| predicted protein [Populus trichocarpa] gi|222864729|gb|EEF01860.1|
           predicted protein [Populus trichocarpa]
          Length = 506

 Score =  281 bits (720), Expect = 3e-74
 Identities = 133/165 (80%), Positives = 147/165 (89%)
 Frame = -3

Query: 496 HTHWRREPICKVRSLGVPTVDMNNVCRCLEEKTGGKIIFRIGGVAYLFRGRNYDPRNRPQ 317
           H+HW+R  +CKVR  GVPTVDM+NVCR LEEKTGGKII R+GGV YLFRGRNY+ R RPQ
Sbjct: 177 HSHWKRRRVCKVRCKGVPTVDMDNVCRHLEEKTGGKIIHRVGGVVYLFRGRNYNYRTRPQ 236

Query: 316 YPVMLWKPATPVYPKLIQEAPEGLTKAEADEFREKGKKLLPICKLAKNGVYNTLVRDVRC 137
           YPVMLWKPATPVYPKLIQEAPEGLTKA+ADEFR+KGK LLPICKLAKNGVY TLVRDVR 
Sbjct: 237 YPVMLWKPATPVYPKLIQEAPEGLTKAQADEFRKKGKNLLPICKLAKNGVYITLVRDVRA 296

Query: 136 AFEECAIVKINCAGMHASDYKKIGAKLKELVPCVLLSFDEEQILM 2
           AFE   +VK++C GM  SDYKK+GAKLK+LVPCVLLSFD+EQILM
Sbjct: 297 AFEGSPLVKVDCKGMEPSDYKKLGAKLKDLVPCVLLSFDDEQILM 341


>ref|XP_002525395.1| conserved hypothetical protein [Ricinus communis]
           gi|223535358|gb|EEF37033.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 561

 Score =  281 bits (718), Expect = 5e-74
 Identities = 133/165 (80%), Positives = 147/165 (89%)
 Frame = -3

Query: 496 HTHWRREPICKVRSLGVPTVDMNNVCRCLEEKTGGKIIFRIGGVAYLFRGRNYDPRNRPQ 317
           H+HWRR P+CKVR  G+PTVDMNN+CR LEE+TGGKII+RIGGV YLF GRNYD R+R +
Sbjct: 227 HSHWRRSPVCKVRCKGIPTVDMNNICRHLEERTGGKIIYRIGGVVYLFCGRNYDYRSRVR 286

Query: 316 YPVMLWKPATPVYPKLIQEAPEGLTKAEADEFREKGKKLLPICKLAKNGVYNTLVRDVRC 137
           YPVMLWKPA PVYPKLIQ+APEGLTKAEADEFREKGK LLPICKLAKNGVY TLVRDVR 
Sbjct: 287 YPVMLWKPAAPVYPKLIQDAPEGLTKAEADEFREKGKNLLPICKLAKNGVYITLVRDVRN 346

Query: 136 AFEECAIVKINCAGMHASDYKKIGAKLKELVPCVLLSFDEEQILM 2
           AFE   +VKI+C GM+ SDYKK+GAKLKELVPCVLLSFD+E ILM
Sbjct: 347 AFEGSPLVKIDCKGMNPSDYKKLGAKLKELVPCVLLSFDDEHILM 391


>ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chloroplastic [Vitis vinifera]
           gi|297739063|emb|CBI28552.3| unnamed protein product
           [Vitis vinifera]
          Length = 561

 Score =  271 bits (694), Expect = 3e-71
 Identities = 128/164 (78%), Positives = 143/164 (87%)
 Frame = -3

Query: 496 HTHWRREPICKVRSLGVPTVDMNNVCRCLEEKTGGKIIFRIGGVAYLFRGRNYDPRNRPQ 317
           H+HW+R+ +CKVR  GVPT+DM+NVC  LEEKTGGKII R+GGV YLFRGRNY+ R RPQ
Sbjct: 231 HSHWKRQRVCKVRCKGVPTIDMDNVCHHLEEKTGGKIIHRVGGVVYLFRGRNYNYRTRPQ 290

Query: 316 YPVMLWKPATPVYPKLIQEAPEGLTKAEADEFREKGKKLLPICKLAKNGVYNTLVRDVRC 137
           YPVMLWKPA PVYPKLIQEAPEGLTK EADE R KGK L+PIC+L KNGVY +LV+DVR 
Sbjct: 291 YPVMLWKPAAPVYPKLIQEAPEGLTKFEADELRMKGKNLIPICRLVKNGVYISLVKDVRD 350

Query: 136 AFEECAIVKINCAGMHASDYKKIGAKLKELVPCVLLSFDEEQIL 5
           AFE   +VKI+C GMHASDYKKIGAKLKELVPCVLLSFD+EQIL
Sbjct: 351 AFEGSPLVKIDCKGMHASDYKKIGAKLKELVPCVLLSFDDEQIL 394


>gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo]
          Length = 603

 Score =  270 bits (689), Expect = 1e-70
 Identities = 128/165 (77%), Positives = 142/165 (86%)
 Frame = -3

Query: 496 HTHWRREPICKVRSLGVPTVDMNNVCRCLEEKTGGKIIFRIGGVAYLFRGRNYDPRNRPQ 317
           H+HW+R+ +CKVR  GVPTVDM+N+C  +EEKTGGKII R+GGV YLFRGRNY+ R RPQ
Sbjct: 277 HSHWKRQRVCKVRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQ 336

Query: 316 YPVMLWKPATPVYPKLIQEAPEGLTKAEADEFREKGKKLLPICKLAKNGVYNTLVRDVRC 137
           YPVMLWKPA PVYPKLIQEAPEGLTK EA+E R KGK LLPICKLAKNGVY +LV DVR 
Sbjct: 337 YPVMLWKPAAPVYPKLIQEAPEGLTKEEANELRMKGKNLLPICKLAKNGVYISLVDDVRH 396

Query: 136 AFEECAIVKINCAGMHASDYKKIGAKLKELVPCVLLSFDEEQILM 2
           AFE   +VKI+C GMH SDYKK+GAKLKELVPCVLLSFD EQILM
Sbjct: 397 AFEGSILVKIDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILM 441


>ref|XP_004155360.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
           chloroplastic-like [Cucumis sativus]
          Length = 603

 Score =  268 bits (684), Expect = 4e-70
 Identities = 127/165 (76%), Positives = 141/165 (85%)
 Frame = -3

Query: 496 HTHWRREPICKVRSLGVPTVDMNNVCRCLEEKTGGKIIFRIGGVAYLFRGRNYDPRNRPQ 317
           H+HW+R+ +CKVR  GVPTVDM+N+C  +EEKTGGKII R+GGV YLFRGRNY+ R RPQ
Sbjct: 277 HSHWKRQRVCKVRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQ 336

Query: 316 YPVMLWKPATPVYPKLIQEAPEGLTKAEADEFREKGKKLLPICKLAKNGVYNTLVRDVRC 137
           YPVMLWKPA PVYPKLIQEAPEGLTK EA+  R KGK LLPICKLAKNGVY +LV DVR 
Sbjct: 337 YPVMLWKPAAPVYPKLIQEAPEGLTKKEANVLRMKGKNLLPICKLAKNGVYISLVNDVRH 396

Query: 136 AFEECAIVKINCAGMHASDYKKIGAKLKELVPCVLLSFDEEQILM 2
           AFE   +VKI+C GMH SDYKK+GAKLKELVPCVLLSFD EQILM
Sbjct: 397 AFEGSILVKIDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILM 441


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