BLASTX nr result

ID: Bupleurum21_contig00018324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018324
         (1416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549121.1| PREDICTED: F-box protein At4g00755-like [Gly...   410   e-112
ref|XP_003534016.1| PREDICTED: F-box protein At4g00755-like [Gly...   410   e-112
ref|XP_002279638.1| PREDICTED: F-box protein At4g00755-like [Vit...   397   e-108
emb|CBI31833.3| unnamed protein product [Vitis vinifera]              379   e-102
ref|XP_002511796.1| conserved hypothetical protein [Ricinus comm...   372   e-100

>ref|XP_003549121.1| PREDICTED: F-box protein At4g00755-like [Glycine max]
          Length = 372

 Score =  410 bits (1055), Expect = e-112
 Identities = 210/356 (58%), Positives = 264/356 (74%), Gaps = 9/356 (2%)
 Frame = -2

Query: 1304 IDFIQCLQPDMSIKILMCLEDPSDLVRVSSVSTSWRHFVIENGLCKQLCLRMYPEIRGVA 1125
            +DFIQ L PDMSIKIL  L+DP DL+RVSSVS+SW  FVIE+GLCKQLCL+M+PEI GVA
Sbjct: 8    VDFIQLLGPDMSIKILTHLDDPCDLIRVSSVSSSWHRFVIEHGLCKQLCLKMFPEISGVA 67

Query: 1124 QIIEVNNVIEPVESEHNNSMKWPCLRRDHRIYAFLAQGFDSFMRKDCLLEAISASSTDNY 945
             IIE++N+IEP+ +   + + W   +R+HR+YAFLA G    MRK+C+ +AISASSTDNY
Sbjct: 68   HIIELDNIIEPLSNTLGSYVSWESHKRNHRVYAFLASGLTP-MRKNCISKAISASSTDNY 126

Query: 944  PEESIQNTLEPSDSIDNRVSYWSSEGQSNPAIPETLLYKLTSNLCVITEIHVXXXXXXXX 765
            PEESI +TLEP D  + R SYWSS+G+S+P++PETL+Y+L S LC++TEI+V        
Sbjct: 127  PEESILHTLEPGDRTEYRASYWSSKGESDPSVPETLVYELASKLCLVTEIYVHPFQAYFQ 186

Query: 764  XXXPIYSAKAVRFRTGHPKYPMDI---LDSVAGESAVQGFADKFVWTYTSPEFPMFQENR 594
               PIYSAKAVRFR GH K+PM++   +D++A    +    ++F+WTYTSPEFPM QENR
Sbjct: 187  HGFPIYSAKAVRFRMGHSKHPMELESPVDNMAANHVLGN--NQFIWTYTSPEFPMLQENR 244

Query: 593  LQKFTLPEPAICIGGILLVELLGRVQRQEMDGLYYTCISHVQVVGRPLSPTFDVEIVDKS 414
            LQKF LPEP +CIGG+LLVELLGRVQ+QEMD L+Y CISHVQV+GR L P FDV+I   S
Sbjct: 245  LQKFKLPEPVLCIGGVLLVELLGRVQKQEMDELFYICISHVQVMGRLLFPEFDVKIHHWS 304

Query: 413  GKCNLKYYPEAS-YCWSPSKSGEDCMNSPSRFRLFTASI-----RGWEQMILNTLL 264
            GKC LKY P+   Y  SP+ S     ++PSR R  T+SI     R WEQ +L  LL
Sbjct: 305  GKCTLKYCPQTDCYMSSPTSSPRSNSSNPSRLRTITSSIMQRGVRRWEQFLLGALL 360


>ref|XP_003534016.1| PREDICTED: F-box protein At4g00755-like [Glycine max]
          Length = 374

 Score =  410 bits (1053), Expect = e-112
 Identities = 207/354 (58%), Positives = 261/354 (73%), Gaps = 7/354 (1%)
 Frame = -2

Query: 1304 IDFIQCLQPDMSIKILMCLEDPSDLVRVSSVSTSWRHFVIENGLCKQLCLRMYPEIRGVA 1125
            +DFIQ L PDMSIKIL  L+DP DL+RVS+VS+SW  FVIE GLCKQLCL+M+PEI GVA
Sbjct: 8    VDFIQLLGPDMSIKILTHLDDPCDLIRVSAVSSSWHRFVIEQGLCKQLCLKMFPEISGVA 67

Query: 1124 QIIEVNNVIEPVESEHNNSMKWPCLRRDHRIYAFLAQGFDSFMRKDCLLEAISASSTDNY 945
             I+E++N+IEP+ +   + + W  L+R HR+YAFLA G    MRK+C+ ++ISASSTDNY
Sbjct: 68   HIVELDNIIEPLINTLGSYVNWESLKRIHRVYAFLASGLTP-MRKNCISKSISASSTDNY 126

Query: 944  PEESIQNTLEPSDSIDNRVSYWSSEGQSNPAIPETLLYKLTSNLCVITEIHVXXXXXXXX 765
            PEESI +TLEP D    R SYWSS+G+S+P++PETL+YKL S LC++TEI+V        
Sbjct: 127  PEESILHTLEPGDRTQYRASYWSSKGESHPSVPETLVYKLASKLCLVTEIYVHPFQAYFQ 186

Query: 764  XXXPIYSAKAVRFRTGHPKYPMDILDSVAGESAVQGFAD-KFVWTYTSPEFPMFQENRLQ 588
               PIYSAKAVRFR GHP++PM++  +V   +      D +F+WTYTSPEFPMFQENRLQ
Sbjct: 187  HGFPIYSAKAVRFRMGHPRHPMELESAVDKMATNDVLGDNQFIWTYTSPEFPMFQENRLQ 246

Query: 587  KFTLPEPAICIGGILLVELLGRVQRQEMDGLYYTCISHVQVVGRPLSPTFDVEIVDKSGK 408
            KF LPEP +CIGG+LLVELLGRVQ+QEMD L+Y CISHVQ +GR +SP FDV+I   SGK
Sbjct: 247  KFKLPEPVLCIGGVLLVELLGRVQKQEMDELFYICISHVQAMGRSISPEFDVKIHHPSGK 306

Query: 407  CNLKYYPEAS-YCWSPSKSGEDCMNSPSRFRLFTASI-----RGWEQMILNTLL 264
            C LKY P+   Y  S + S     ++PSR R  T++I     R WEQ +L+ LL
Sbjct: 307  CTLKYCPQIDCYVSSSTSSQRSDSSNPSRLRTITSNIMQRGVRRWEQFLLSALL 360


>ref|XP_002279638.1| PREDICTED: F-box protein At4g00755-like [Vitis vinifera]
          Length = 368

 Score =  397 bits (1019), Expect = e-108
 Identities = 202/315 (64%), Positives = 235/315 (74%), Gaps = 2/315 (0%)
 Frame = -2

Query: 1301 DFIQCLQPDMSIKILMCLEDPSDLVRVSSVSTSWRHFVIENGLCKQLCLRMYPEIRGVAQ 1122
            DFI+ L  DMSIKILMCLEDPSDLVRVS+VS  WR FVIENGL KQLCLRM PE+  +A 
Sbjct: 9    DFIRWLGRDMSIKILMCLEDPSDLVRVSTVSRLWRQFVIENGLSKQLCLRMLPEMSSLAG 68

Query: 1121 IIEVNNVIEPVESEHNNSMKWPCLRRDHRIYAFLAQGFDSFMRKDCLLEAISASSTDNYP 942
             IE+NN+IE  E + NN M+   L ++HR+YA+LAQG  S MR  C+  AISASSTDNYP
Sbjct: 69   AIEINNMIETEEVQSNN-MERKILEKNHRVYAYLAQGLTSSMRTACIARAISASSTDNYP 127

Query: 941  EESIQNTLEPSDSIDNRVSYWSSEGQSNPAIPETLLYKLTSNLCVITEIHVXXXXXXXXX 762
            EE+I NTL+P D I +  SYWSSEG+ +P+IPE+L+YKL +NLCV+TEIHV         
Sbjct: 128  EETIDNTLDPRDRIRHSASYWSSEGEMDPSIPESLVYKLIANLCVVTEIHVQPFQAYFQF 187

Query: 761  XXPIYSAKAVRFRTGHPKYPMDILDSVAGESAV--QGFADKFVWTYTSPEFPMFQENRLQ 588
              PIYSAKAVRFR GH  YPM+     A + A       D+++WTYTSPEFPM QENRLQ
Sbjct: 188  GHPIYSAKAVRFRMGHQMYPMERGGDAANDPAAGFDSLEDQYIWTYTSPEFPMAQENRLQ 247

Query: 587  KFTLPEPAICIGGILLVELLGRVQRQEMDGLYYTCISHVQVVGRPLSPTFDVEIVDKSGK 408
            KF LPEPA+CIGGIL +ELLGRVQ+QEMDGLYY C+SHVQVVGRPLS  FDVEI D SGK
Sbjct: 248  KFKLPEPALCIGGILQIELLGRVQKQEMDGLYYICVSHVQVVGRPLSEAFDVEIHDPSGK 307

Query: 407  CNLKYYPEASYCWSP 363
              LKY+     C SP
Sbjct: 308  FTLKYFHRGYQCQSP 322


>emb|CBI31833.3| unnamed protein product [Vitis vinifera]
          Length = 345

 Score =  379 bits (972), Expect = e-102
 Identities = 191/300 (63%), Positives = 223/300 (74%), Gaps = 2/300 (0%)
 Frame = -2

Query: 1256 MCLEDPSDLVRVSSVSTSWRHFVIENGLCKQLCLRMYPEIRGVAQIIEVNNVIEPVESEH 1077
            MCLEDPSDLVRVS+VS  WR FVIENGL KQLCLRM PE+  +A  IE+NN+IE  E + 
Sbjct: 1    MCLEDPSDLVRVSTVSRLWRQFVIENGLSKQLCLRMLPEMSSLAGAIEINNMIETEEVQS 60

Query: 1076 NNSMKWPCLRRDHRIYAFLAQGFDSFMRKDCLLEAISASSTDNYPEESIQNTLEPSDSID 897
            NN M+   L ++HR+YA+LAQG  S MR  C+  AISASSTDNYPEE+I NTL+P D I 
Sbjct: 61   NN-MERKILEKNHRVYAYLAQGLTSSMRTACIARAISASSTDNYPEETIDNTLDPRDRIR 119

Query: 896  NRVSYWSSEGQSNPAIPETLLYKLTSNLCVITEIHVXXXXXXXXXXXPIYSAKAVRFRTG 717
            +  SYWSSEG+ +P+IPE+L+YKL +NLCV+TEIHV           PIYSAKAVRFR G
Sbjct: 120  HSASYWSSEGEMDPSIPESLVYKLIANLCVVTEIHVQPFQAYFQFGHPIYSAKAVRFRMG 179

Query: 716  HPKYPMDILDSVAGESAV--QGFADKFVWTYTSPEFPMFQENRLQKFTLPEPAICIGGIL 543
            H  YPM+     A + A       D+++WTYTSPEFPM QENRLQKF LPEPA+CIGGIL
Sbjct: 180  HQMYPMERGGDAANDPAAGFDSLEDQYIWTYTSPEFPMAQENRLQKFKLPEPALCIGGIL 239

Query: 542  LVELLGRVQRQEMDGLYYTCISHVQVVGRPLSPTFDVEIVDKSGKCNLKYYPEASYCWSP 363
             +ELLGRVQ+QEMDGLYY C+SHVQVVGRPLS  FDVEI D SGK  LKY+     C SP
Sbjct: 240  QIELLGRVQKQEMDGLYYICVSHVQVVGRPLSEAFDVEIHDPSGKFTLKYFHRGYQCQSP 299


>ref|XP_002511796.1| conserved hypothetical protein [Ricinus communis]
            gi|223548976|gb|EEF50465.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 362

 Score =  372 bits (954), Expect = e-100
 Identities = 194/331 (58%), Positives = 234/331 (70%), Gaps = 7/331 (2%)
 Frame = -2

Query: 1316 MEVCIDFIQCLQPDMSIKILMCLEDPSDLVRVSSVSTSWRHFVIENGLCKQLCLRMYPEI 1137
            ME  +DF   L  D  ++ILMCLEDPSDLVRVSSVS SWRHFVI NGLCKQLCLRM+P +
Sbjct: 1    METGMDFFSWLDYDTVMRILMCLEDPSDLVRVSSVSRSWRHFVIANGLCKQLCLRMFPCL 60

Query: 1136 RGVAQIIEVNNVIEPVESEHNNSMKWPCLRRDHRIYAFLAQGFDSFMRKDCLLEAISASS 957
              V  + E +++  P+    + SM+W  L R+HR++AFLA+G  SF  K+C+ EAISASS
Sbjct: 61   HSVDHVTEPDSMKNPLGIGCSKSMEWETLEREHRVFAFLARGCTSFALKECISEAISASS 120

Query: 956  TDNYPEESIQNTLEPSDSIDNRVSYWSSEGQSNPAIPETLLYKLTSNLCVITEIHVXXXX 777
            TDNYP ESI NTLEP D I  R SYWSS+GQSNPA+PETL+YKL +++C+ITEI V    
Sbjct: 121  TDNYPGESIHNTLEPRDRIARRASYWSSKGQSNPAVPETLIYKLVADICLITEISVHPFQ 180

Query: 776  XXXXXXXPIYSAKAVRFRTGHPKYPMDILDSVAGESAVQGFADKFVWTYTSPEFPMFQEN 597
                   PIYSA +VRFR GH K P D  D ++        AD  VWTYTSPEF M QEN
Sbjct: 181  AFFQPGTPIYSANSVRFRMGHLKAPED--DPMS--EPCDNCADDVVWTYTSPEFAMAQEN 236

Query: 596  RLQKFTLPEPAICIGGILLVELLGRVQRQEMDGLYYTCISHVQVVGRPLSPTFDVEIVDK 417
            RLQKF LPEP +CIGGIL VELLGRVQ+QEMDGL+Y C+SHVQV+GRPLSP F  EI+++
Sbjct: 237  RLQKFELPEPVLCIGGILQVELLGRVQKQEMDGLFYICVSHVQVLGRPLSPAFTFEILER 296

Query: 416  SGKCNLKYY-------PEASYCWSPSKSGED 345
            SGK  LK         PE ++C  P+   E+
Sbjct: 297  SGKFVLKTQSYARPSSPEKTFCPLPNVDLEE 327


Top