BLASTX nr result

ID: Bupleurum21_contig00018256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018256
         (1056 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71551.1| hypothetical protein VITISV_030236 [Vitis vinifera]   449   e-124
ref|XP_002263521.1| PREDICTED: translocase of chloroplast 90, ch...   448   e-123
ref|XP_003609438.1| Translocase of chloroplast [Medicago truncat...   440   e-121
ref|XP_002530763.1| protein translocase, putative [Ricinus commu...   434   e-119
ref|XP_002324617.1| predicted protein [Populus trichocarpa] gi|2...   427   e-117

>emb|CAN71551.1| hypothetical protein VITISV_030236 [Vitis vinifera]
          Length = 802

 Score =  449 bits (1154), Expect = e-124
 Identities = 224/353 (63%), Positives = 259/353 (73%), Gaps = 3/353 (0%)
 Frame = +3

Query: 3    FERLDLINNGYSDFPLLKLITEVFGSAIWFNTIVVMTHSSSTLPEGANGYSVTYDSYVAE 182
            FERLDLIN GYSDFPLLKLITEVFG AIWF+TI+VMTH SS LPEG NG+ V Y+SYV +
Sbjct: 267  FERLDLINMGYSDFPLLKLITEVFGPAIWFSTILVMTHCSSDLPEGPNGFPVNYESYVTQ 326

Query: 183  CTNIIQHYIHQAVADPKLENPVLLVENHAQCRTDINGEKILPTGQAWRSQFFLLCTCTKI 362
            CT+++QHY+ QAV+D +LENPVLLVENH  CRT++ G+KILP GQ W SQF LLC CTK+
Sbjct: 327  CTDLVQHYVQQAVSDTRLENPVLLVENHPYCRTNVMGKKILPNGQVWISQFLLLCLCTKV 386

Query: 363  LADVNTLLKFQDSIELGXXXXXXXXXXXXXXXVFLGHHIKCSDGD-NNDIDELTIXXXXX 539
            L D N LL+FQ SI+LG                FL H       + +N+IDE  I     
Sbjct: 387  LNDANALLRFQHSIQLGPSSNTRLPSLPHLLSSFLRHRTTLDPSETDNEIDE--ILFLEE 444

Query: 540  XXXXXYDRLPPIRILTKSQFEKLTNYQKKDYLNELDYRETLFLKKQLKEEIFRRKGKHSK 719
                 YD+LPPIRILTKSQFE+LT+ QKKDYL+ELDYRETL+LKKQ+KEE  RR+     
Sbjct: 445  EEVDEYDQLPPIRILTKSQFERLTSSQKKDYLDELDYRETLYLKKQVKEEAQRRRESKLS 504

Query: 720  GETSAVGGS--DNLEETTEPVALPDMAVPLTFDPDDPVHRYRCVVTGDQWLARPVLDPHG 893
             E S       DN E   E V LPDMAVPL+FD D P HRYRC+V  DQWL RPVLDPHG
Sbjct: 505  REVSLADSDNPDNKEAYPEAVMLPDMAVPLSFDSDCPAHRYRCLVMSDQWLVRPVLDPHG 564

Query: 894  WDHDIGFDGINLDTTTEVKDNVFASVTGQMSKDKQDFSIQSECAAAFAQPRGP 1052
            WDHD+GFDGINL+TT ++K N+ ASVTGQMSKDKQDFSIQSECAA +  PRGP
Sbjct: 565  WDHDVGFDGINLETTMDLKGNLIASVTGQMSKDKQDFSIQSECAAVYTDPRGP 617


>ref|XP_002263521.1| PREDICTED: translocase of chloroplast 90, chloroplastic-like [Vitis
            vinifera]
          Length = 798

 Score =  448 bits (1152), Expect = e-123
 Identities = 224/353 (63%), Positives = 259/353 (73%), Gaps = 3/353 (0%)
 Frame = +3

Query: 3    FERLDLINNGYSDFPLLKLITEVFGSAIWFNTIVVMTHSSSTLPEGANGYSVTYDSYVAE 182
            FERLDLIN GYSDFPLLKLITEVFG AIWF+TI+VMTH SS LPEG NG+ V Y+SYV +
Sbjct: 263  FERLDLINMGYSDFPLLKLITEVFGPAIWFSTILVMTHCSSDLPEGPNGFPVNYESYVTQ 322

Query: 183  CTNIIQHYIHQAVADPKLENPVLLVENHAQCRTDINGEKILPTGQAWRSQFFLLCTCTKI 362
            CT+++QHY+ QAV+D +LENPVLLVENH  CRT++ G+KILP GQ W SQF LLC CTK+
Sbjct: 323  CTDLVQHYVQQAVSDTRLENPVLLVENHPYCRTNVMGKKILPNGQVWISQFLLLCLCTKV 382

Query: 363  LADVNTLLKFQDSIELGXXXXXXXXXXXXXXXVFLGHHIKCSDGD-NNDIDELTIXXXXX 539
            L D N LL+FQ SI+LG                FL H       + +N+IDE  I     
Sbjct: 383  LNDANALLRFQHSIQLGPSSNTRLPSLPHLLSSFLRHRSTLDPSETDNEIDE--ILFLEE 440

Query: 540  XXXXXYDRLPPIRILTKSQFEKLTNYQKKDYLNELDYRETLFLKKQLKEEIFRRKGKHSK 719
                 YD+LPPIRILTKSQFE+LT+ QKKDYL+ELDYRETL+LKKQ+KEE  RR+     
Sbjct: 441  EEVDEYDQLPPIRILTKSQFERLTSSQKKDYLDELDYRETLYLKKQVKEEAQRRRESKLS 500

Query: 720  GETSAVGGS--DNLEETTEPVALPDMAVPLTFDPDDPVHRYRCVVTGDQWLARPVLDPHG 893
             E S       DN E   E V LPDMAVPL+FD D P HRYRC+V  DQWL RPVLDPHG
Sbjct: 501  REVSLADSDNPDNKEVYPEAVMLPDMAVPLSFDSDCPAHRYRCLVMSDQWLVRPVLDPHG 560

Query: 894  WDHDIGFDGINLDTTTEVKDNVFASVTGQMSKDKQDFSIQSECAAAFAQPRGP 1052
            WDHD+GFDGINL+TT ++K N+ ASVTGQMSKDKQDFSIQSECAA +  PRGP
Sbjct: 561  WDHDVGFDGINLETTMDLKGNLIASVTGQMSKDKQDFSIQSECAAVYTDPRGP 613


>ref|XP_003609438.1| Translocase of chloroplast [Medicago truncatula]
            gi|355510493|gb|AES91635.1| Translocase of chloroplast
            [Medicago truncatula]
          Length = 835

 Score =  440 bits (1132), Expect = e-121
 Identities = 219/354 (61%), Positives = 264/354 (74%), Gaps = 3/354 (0%)
 Frame = +3

Query: 3    FERLDLINNGYSDFPLLKLITEVFGSAIWFNTIVVMTHSSSTLPEGANGYSVTYDSYVAE 182
            FERLDLIN+GYSDFPLLKLITEVFG+AIWFNTI+VMTHSSS++PEG NGY+V YDSY ++
Sbjct: 310  FERLDLINSGYSDFPLLKLITEVFGAAIWFNTILVMTHSSSSIPEGPNGYTVNYDSYTSQ 369

Query: 183  CTNIIQHYIHQAVADPKLENPVLLVENHAQCRTDINGEKILPTGQAWRSQFFLLCTCTKI 362
            CTN+IQ YIHQA+ D +LENP L VENH QC  +I GEKILP GQ WRSQ  L C CTK+
Sbjct: 370  CTNLIQQYIHQAILDSRLENPALFVENHPQCPRNILGEKILPNGQIWRSQLLLFCICTKV 429

Query: 363  LADVNTLLKFQDSIELGXXXXXXXXXXXXXXXVFLGHH-IKCSDGDNNDIDELTIXXXXX 539
            L DVN+LLKFQ+ +ELG                 L H  +    G +++I+E+ +     
Sbjct: 430  LGDVNSLLKFQNGVELGPTNSARVPSLPHLLSSLLRHRSVSNQSGIDDEIEEILL--SDK 487

Query: 540  XXXXXYDRLPPIRILTKSQFEKLTNYQKKDYLNELDYRETLFLKKQLKEEIFRRKGK--H 713
                 YD+LP IRILTKSQFEKL+  QK+DYL+EL+YRETL+LKKQ+KEE  RRK K   
Sbjct: 488  EEGDEYDQLPSIRILTKSQFEKLSKSQKEDYLDELEYRETLYLKKQMKEEYRRRKEKLLL 547

Query: 714  SKGETSAVGGSDNLEETTEPVALPDMAVPLTFDPDDPVHRYRCVVTGDQWLARPVLDPHG 893
             + + S +  SD+ +   EPV LPDMAVPL+FD D  +HRYRC+V  DQ L RPVLDP G
Sbjct: 548  EEQKFSDIDNSDDQQGPPEPVQLPDMAVPLSFDSDCAIHRYRCLVDNDQLLVRPVLDPQG 607

Query: 894  WDHDIGFDGINLDTTTEVKDNVFASVTGQMSKDKQDFSIQSECAAAFAQPRGPT 1055
            WDHD+GFDGINL+TTTEVK NV+ASV GQM K+KQDF+IQSECAAA+  P GP+
Sbjct: 608  WDHDVGFDGINLETTTEVKKNVYASVVGQMHKNKQDFNIQSECAAAYVNPMGPS 661


>ref|XP_002530763.1| protein translocase, putative [Ricinus communis]
            gi|223529679|gb|EEF31623.1| protein translocase, putative
            [Ricinus communis]
          Length = 743

 Score =  434 bits (1115), Expect = e-119
 Identities = 216/354 (61%), Positives = 260/354 (73%), Gaps = 3/354 (0%)
 Frame = +3

Query: 3    FERLDLINNGYSDFPLLKLITEVFGSAIWFNTIVVMTHSSSTLPEGANGYSVTYDSYVAE 182
            FERLDL+N GYSDFPLL L+TEVFGSAIWFNT++VMTH++ TLPEG NGY V Y+SYV  
Sbjct: 209  FERLDLVNLGYSDFPLLTLMTEVFGSAIWFNTVLVMTHAAPTLPEGPNGYPVNYESYVTR 268

Query: 183  CTNIIQHYIHQAVADPKLENPVLLVENHAQCRTDINGEKILPTGQAWRSQFFLLCTCTKI 362
            CT+++QHYIHQAV+D KLENPVLLVENH QC+ +  GE ILP GQAW+SQ  LLC C KI
Sbjct: 269  CTDVLQHYIHQAVSDAKLENPVLLVENHPQCKKNFMGESILPNGQAWKSQVLLLCICNKI 328

Query: 363  LADVNTLLKFQDSIELGXXXXXXXXXXXXXXXVFLGHHIKCSDGDN-NDIDELTIXXXXX 539
            L D +TLL+FQDSI+LG                 L H    S  ++ +++D + +     
Sbjct: 329  LGDASTLLEFQDSIKLGSSNSQRMPSLPHLLSSVLQHRSVSSPNESEHEVDGILL--SDA 386

Query: 540  XXXXXYDRLPPIRILTKSQFEKLTNYQKKDYLNELDYRETLFLKKQLKEEIFRRKGKH-S 716
                 YD+LPPIRILTKSQFE+LT  QK+DYL+ELDYRETL+LKKQLKE+  RR+ K  S
Sbjct: 387  DEEDEYDQLPPIRILTKSQFERLTKSQKRDYLDELDYRETLYLKKQLKEDARRRREKQLS 446

Query: 717  KGETSAVGGS-DNLEETTEPVALPDMAVPLTFDPDDPVHRYRCVVTGDQWLARPVLDPHG 893
              E      + D+ + + E V LPDMAVP +FD D PVHRYRC+ T DQWL RPVLDP G
Sbjct: 447  DAENFGEDNTYDDQQASPEAVLLPDMAVPPSFDSDCPVHRYRCLATSDQWLVRPVLDPQG 506

Query: 894  WDHDIGFDGINLDTTTEVKDNVFASVTGQMSKDKQDFSIQSECAAAFAQPRGPT 1055
            WDHD+GFDGINL+T  EVK N+ AS+ GQM+KDKQ FSIQSECAAA+  P+GPT
Sbjct: 507  WDHDVGFDGINLETAIEVKRNIHASIVGQMTKDKQHFSIQSECAAAYKDPKGPT 560


>ref|XP_002324617.1| predicted protein [Populus trichocarpa] gi|222866051|gb|EEF03182.1|
            predicted protein [Populus trichocarpa]
          Length = 749

 Score =  427 bits (1099), Expect = e-117
 Identities = 214/354 (60%), Positives = 259/354 (73%), Gaps = 3/354 (0%)
 Frame = +3

Query: 3    FERLDLINNGYSDFPLLKLITEVFGSAIWFNTIVVMTHSSSTLPEGANGYSVTYDSYVAE 182
            FERLDLIN GY DFPLLKL+TEVFG+A WFNTI+VMTH S+T PEG +G+ +TY+SYV +
Sbjct: 214  FERLDLINMGYCDFPLLKLMTEVFGNAFWFNTILVMTHGSAT-PEGPSGFPITYESYVTQ 272

Query: 183  CTNIIQHYIHQAVADPKLENPVLLVENHAQCRTDINGEKILPTGQAWRSQFFLLCTCTKI 362
            C +++QHYI+QAV+D KLENPV+LVEN   C+ +  GE +LP GQ W+S F LLC CTK+
Sbjct: 273  CADLMQHYINQAVSDSKLENPVVLVENDPHCKKNFMGESVLPNGQVWKSHFLLLCICTKV 332

Query: 363  LADVNTLLKFQDSIELGXXXXXXXXXXXXXXXVFLGHHIKC-SDGDNNDIDELTIXXXXX 539
            L D NTLL F+ SIELG                 L H     S G   D DE+ +     
Sbjct: 333  LGDANTLLDFEGSIELGPLITPRVPSLPHLLSSLLKHRSTTDSTGVEQDADEILLSDAEE 392

Query: 540  XXXXXYDRLPPIRILTKSQFEKLTNYQKKDYLNELDYRETLFLKKQLKEEIFRRKGKH-S 716
                 Y++LPPIRILTKSQFEKLT  QKKDYL+ELDYRETL+LKKQLKEE  RR+ +  S
Sbjct: 393  EDD--YNQLPPIRILTKSQFEKLTKSQKKDYLDELDYRETLYLKKQLKEESQRRRERRLS 450

Query: 717  KGETSAVG-GSDNLEETTEPVALPDMAVPLTFDPDDPVHRYRCVVTGDQWLARPVLDPHG 893
            + E   VG  SD+ + + E V LPDMAVP +FD D  +H+YRC+VT DQWL RPVLDPHG
Sbjct: 451  REEDCGVGDNSDHQQASPEAVLLPDMAVPPSFDSDCTIHKYRCLVTSDQWLVRPVLDPHG 510

Query: 894  WDHDIGFDGINLDTTTEVKDNVFASVTGQMSKDKQDFSIQSECAAAFAQPRGPT 1055
            WDHD+GFDG+NL+T  E++ NV+AS+TGQMSKDKQDFSI SECAAA+A PRG T
Sbjct: 511  WDHDVGFDGVNLETAIEIRRNVYASITGQMSKDKQDFSIHSECAAAYADPRGQT 564


Top