BLASTX nr result

ID: Bupleurum21_contig00018248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018248
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|2...   107   9e-22
ref|XP_003536992.1| PREDICTED: uncharacterized protein LOC100819...    94   2e-17
ref|XP_003551192.1| PREDICTED: uncharacterized protein LOC100784...    93   3e-17
ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago trunc...    89   3e-16
gb|ABA93603.1| hAT family dimerisation domain containing protein...    86   5e-15

>ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|222858184|gb|EEE95731.1|
           predicted protein [Populus trichocarpa]
          Length = 788

 Score =  107 bits (268), Expect = 9e-22
 Identities = 50/82 (60%), Positives = 70/82 (85%)
 Frame = -3

Query: 246 FSESNMELLLCMSCLSPNDAFAAFDKKKLIRLAQFYPSDFSSVDLMMLGNL*DTYIFDMR 67
           F+E++ ELLLC++CL+P+D+F+AF+K+KL+RLA FYPS+FS VDLM+LG+  DTYI D+R
Sbjct: 624 FTETSTELLLCVACLNPSDSFSAFNKEKLLRLALFYPSEFSIVDLMILGDQLDTYIIDLR 683

Query: 66  SDNEFLMLNGITVLAEKLVQTK 1
            D+EF  + GI  LAEK+V+TK
Sbjct: 684 GDDEFSDIEGIASLAEKMVKTK 705



 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 39/75 (52%), Positives = 51/75 (68%)
 Frame = -2

Query: 472 ESDESINQGNFLEILKFVAAHNKEIDGGVGKNAPGNLKISSPDIQHDIVNASAVETLNYI 293
           E + S NQGN+LE+L F++ +N+ I       AP + K++SPDIQ DI  A+A E  N I
Sbjct: 214 ECECSSNQGNYLELLHFLSRNNEAIKRVTFSEAPRHNKLTSPDIQKDITQAAAEEITNVI 273

Query: 292 IHDLGDDLFAILIDE 248
           I DLGD LF+ILIDE
Sbjct: 274 IKDLGDSLFSILIDE 288


>ref|XP_003536992.1| PREDICTED: uncharacterized protein LOC100819269 [Glycine max]
          Length = 557

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 44/81 (54%), Positives = 60/81 (74%)
 Frame = -3

Query: 246 FSESNMELLLCMSCLSPNDAFAAFDKKKLIRLAQFYPSDFSSVDLMMLGNL*DTYIFDMR 67
           F+E+N  LL CM CL+P + F+AFDK +LI  A+FYP +FS+++L+ML N  +TYI DMR
Sbjct: 393 FTETNTRLLFCMDCLNPTNLFSAFDKARLIEFAKFYPCEFSAINLVMLDNQLETYIIDMR 452

Query: 66  SDNEFLMLNGITVLAEKLVQT 4
           S+ E   L GI  L+EKLV+T
Sbjct: 453 SNVELSFLKGIKNLSEKLVET 473


>ref|XP_003551192.1| PREDICTED: uncharacterized protein LOC100784329 [Glycine max]
          Length = 428

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 42/83 (50%), Positives = 62/83 (74%)
 Frame = -3

Query: 249 NFSESNMELLLCMSCLSPNDAFAAFDKKKLIRLAQFYPSDFSSVDLMMLGNL*DTYIFDM 70
           +F+E+N +LLLCM CL+P + F+ FD  +LI  A+FYP +FS+++L+ML N  +TYI DM
Sbjct: 263 HFTETNTQLLLCMDCLNPTNLFSTFDNARLIEFAKFYPCEFSAINLVMLNNQLETYIIDM 322

Query: 69  RSDNEFLMLNGITVLAEKLVQTK 1
           R++ EF  L GI  + EKLV+T+
Sbjct: 323 RNNIEFSSLKGIKNIYEKLVETR 345


>ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago truncatula]
           gi|355516931|gb|AES98554.1| Zinc finger MYM-type protein
           [Medicago truncatula]
          Length = 892

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/82 (51%), Positives = 58/82 (70%)
 Frame = -3

Query: 246 FSESNMELLLCMSCLSPNDAFAAFDKKKLIRLAQFYPSDFSSVDLMMLGNL*DTYIFDMR 67
           F+E+N  LL+CM CL PN++F+ FDK KLI  A+FYP +FS   L++L +  +TYIFDMR
Sbjct: 728 FNETNSRLLICMECLCPNNSFSKFDKAKLIEFAKFYPIEFSPTSLVLLDSQLETYIFDMR 787

Query: 66  SDNEFLMLNGITVLAEKLVQTK 1
              EF  L GI+ L++K+V  K
Sbjct: 788 RSVEFASLKGISDLSKKMVALK 809



 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 39/75 (52%), Positives = 53/75 (70%)
 Frame = -2

Query: 472 ESDESINQGNFLEILKFVAAHNKEIDGGVGKNAPGNLKISSPDIQHDIVNASAVETLNYI 293
           E  ES NQGNFLE+L++ A   K++   V +NAP N K++ P IQ + V+A ++ET   I
Sbjct: 317 EKIESSNQGNFLELLRWFAKRKKKVKRVVLENAPENDKMTCPSIQKEFVSAISLETTKAI 376

Query: 292 IHDLGDDLFAILIDE 248
           I DLGD+LFAIL+DE
Sbjct: 377 IEDLGDELFAILVDE 391


>gb|ABA93603.1| hAT family dimerisation domain containing protein [Oryza sativa
           Japonica Group]
          Length = 876

 Score = 85.5 bits (210), Expect = 5e-15
 Identities = 44/82 (53%), Positives = 54/82 (65%)
 Frame = -3

Query: 246 FSESNMELLLCMSCLSPNDAFAAFDKKKLIRLAQFYPSDFSSVDLMMLGNL*DTYIFDMR 67
           F E +M LLLCMS  +P D+FA+FD +K++RLA FYP D    DLM L    DTYI DM 
Sbjct: 709 FDEVSMALLLCMSAFNPTDSFASFDAQKILRLASFYPKDIEGSDLMKLELQLDTYISDMS 768

Query: 66  SDNEFLMLNGITVLAEKLVQTK 1
            D+ F  LN I  L+ KLV+TK
Sbjct: 769 EDDRFKGLNNIGELSIKLVETK 790



 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 34/75 (45%), Positives = 56/75 (74%)
 Frame = -2

Query: 472 ESDESINQGNFLEILKFVAAHNKEIDGGVGKNAPGNLKISSPDIQHDIVNASAVETLNYI 293
           E++ES N+GNFLE+LK++A +N++++  V  NAPGN  ++SP IQ  ++   ++ET + I
Sbjct: 299 ETEESNNRGNFLELLKWLAGNNEDVNKVVLNNAPGNCILTSPRIQKQVIRCCSMETTSCI 358

Query: 292 IHDLGDDLFAILIDE 248
           + +LGD+ +AIL DE
Sbjct: 359 LKELGDEHYAILADE 373


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