BLASTX nr result

ID: Bupleurum21_contig00018243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018243
         (657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275935.1| PREDICTED: GEM-like protein 4 [Vitis vinifer...   246   3e-63
ref|XP_002513123.1| conserved hypothetical protein [Ricinus comm...   244   1e-62
ref|XP_003555753.1| PREDICTED: GEM-like protein 4-like [Glycine ...   241   7e-62
ref|XP_003528369.1| PREDICTED: GEM-like protein 4-like [Glycine ...   241   9e-62
ref|XP_002306370.1| predicted protein [Populus trichocarpa] gi|2...   240   2e-61

>ref|XP_002275935.1| PREDICTED: GEM-like protein 4 [Vitis vinifera]
           gi|297742758|emb|CBI35392.3| unnamed protein product
           [Vitis vinifera]
          Length = 218

 Score =  246 bits (628), Expect = 3e-63
 Identities = 127/217 (58%), Positives = 158/217 (72%)
 Frame = -2

Query: 656 IGIPISSAAYSSKKSFDSHLKDHNLEIQRYNPSLNANSTFSQNKLELTNIRTNKLAERTE 477
           IGIP+SS+AY  + S   +  +     Q  +P    +S            R NKL ++ +
Sbjct: 10  IGIPVSSSAYPVEGSGKGYFLEPPTRHQTPSPPDQGDSVTD---------RMNKLGKKAD 60

Query: 476 SFALRVRDHVKLGPRITDTLKGKLNLGVMILRVGGITKVFNQKFRTQGGEKLLKAFQCYL 297
           SF   VR+HV+L P I++T+KGKL+LG  IL+VGG+ K+F + FR + GEKLLKA QCYL
Sbjct: 61  SFVNGVREHVRLAPNISETVKGKLSLGARILQVGGVEKIFKRLFRVREGEKLLKASQCYL 120

Query: 296 STTAGPIAGLLFISTDKVAFCSERTMKVSSSMGEMLRIHYKVVIPLDKIKRANTITNTKI 117
           STTAGPIAGLLFISTDK+AFCSER +K SS+ GE++RIHYKV+IPL KIK AN   NTK 
Sbjct: 121 STTAGPIAGLLFISTDKIAFCSERAIKFSSANGELVRIHYKVLIPLRKIKIANQSENTKK 180

Query: 116 PSQKYIEIVTGDNFDFWFMGFLNYQRTFRYLDQAISQ 6
           PSQKYIEIVT DNF+FWFMGFLNYQ+ F+YL QA+SQ
Sbjct: 181 PSQKYIEIVTTDNFEFWFMGFLNYQKAFKYLQQALSQ 217


>ref|XP_002513123.1| conserved hypothetical protein [Ricinus communis]
           gi|223548134|gb|EEF49626.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 237

 Score =  244 bits (623), Expect = 1e-62
 Identities = 129/218 (59%), Positives = 164/218 (75%), Gaps = 1/218 (0%)
 Frame = -2

Query: 656 IGIPISSAAYSSKKSFDSHLKDHNLEIQRYNPS-LNANSTFSQNKLELTNIRTNKLAERT 480
           IGIPI+SAA   +K+    L++ +   Q Y P+  N +    Q+K++    R NKL ++ 
Sbjct: 10  IGIPITSAASQVQKTPRLFLENTS---QSYVPTPANKSLAVKQDKIDSVLKRMNKLGKKA 66

Query: 479 ESFALRVRDHVKLGPRITDTLKGKLNLGVMILRVGGITKVFNQKFRTQGGEKLLKAFQCY 300
           + FA  +R+HVKLG +IT+TLKGKL+LG  IL+VGG+ K++ Q F  + GE+LLKA QCY
Sbjct: 67  DKFAHGIREHVKLGTKITETLKGKLSLGARILQVGGVKKIYRQLFNVKEGERLLKACQCY 126

Query: 299 LSTTAGPIAGLLFISTDKVAFCSERTMKVSSSMGEMLRIHYKVVIPLDKIKRANTITNTK 120
           LSTTAGPIAGLLFIS+DK+AFCSER++K+SS  G+M+RIHYKVVIPL KIK AN   N K
Sbjct: 127 LSTTAGPIAGLLFISSDKLAFCSERSIKLSSPEGKMVRIHYKVVIPLKKIKIANQSENVK 186

Query: 119 IPSQKYIEIVTGDNFDFWFMGFLNYQRTFRYLDQAISQ 6
            PSQK+IEIVT D+FDFWFMGFLNYQ+ FR L QA SQ
Sbjct: 187 KPSQKFIEIVTVDDFDFWFMGFLNYQKAFRCLQQATSQ 224


>ref|XP_003555753.1| PREDICTED: GEM-like protein 4-like [Glycine max]
          Length = 222

 Score =  241 bits (616), Expect = 7e-62
 Identities = 124/217 (57%), Positives = 155/217 (71%)
 Frame = -2

Query: 656 IGIPISSAAYSSKKSFDSHLKDHNLEIQRYNPSLNANSTFSQNKLELTNIRTNKLAERTE 477
           IG P +SAAY  +KS   +L D   +       + + ++  Q  +     R NKL  +T 
Sbjct: 11  IGFPFTSAAYLGEKSSKRYLPDPATQY------ITSTTSSKQGGVNSVLTRMNKLGRKTN 64

Query: 476 SFALRVRDHVKLGPRITDTLKGKLNLGVMILRVGGITKVFNQKFRTQGGEKLLKAFQCYL 297
            FA  +++HVKLG +ITDT+KGKL+LG  IL+VGG+ KVF Q F  + GEKLLKA QCYL
Sbjct: 65  IFATGLKEHVKLGQKITDTVKGKLSLGARILQVGGVKKVFMQLFSVKDGEKLLKASQCYL 124

Query: 296 STTAGPIAGLLFISTDKVAFCSERTMKVSSSMGEMLRIHYKVVIPLDKIKRANTITNTKI 117
           STT+GP+AGLLFISTDKVAFCSER++K  SS G ++RIHYKVVIPL+KI+  N   + K 
Sbjct: 125 STTSGPLAGLLFISTDKVAFCSERSIKAYSSKGHLIRIHYKVVIPLEKIRSINQSQHVKK 184

Query: 116 PSQKYIEIVTGDNFDFWFMGFLNYQRTFRYLDQAISQ 6
           PS KYIEIVT D+FDFWFMGFLNYQ+ F+YL Q ISQ
Sbjct: 185 PSPKYIEIVTVDDFDFWFMGFLNYQKAFKYLKQVISQ 221


>ref|XP_003528369.1| PREDICTED: GEM-like protein 4-like [Glycine max]
          Length = 224

 Score =  241 bits (615), Expect = 9e-62
 Identities = 129/218 (59%), Positives = 162/218 (74%), Gaps = 1/218 (0%)
 Frame = -2

Query: 656 IGIPISSAAYSSKKSFDSHLKDHNLEIQRYNPSLNANSTFSQNKLELTNIRTNKLAERTE 477
           IG P +SAAY  +KS   +L D      +YN S  ++     N + LT +  N+L  +T 
Sbjct: 11  IGFPFTSAAYVGEKS-KRYLPD---PATQYNTSTTSSEQGRVNSV-LTGM--NRLGRKTN 63

Query: 476 SFALRVRDHVKLGPRITDTLKGKLNLGVMILRVGGITKVFNQKFRTQ-GGEKLLKAFQCY 300
           + A  +++HVKLGP+ITDT+KGKL+LG  IL+VGG+ KVF Q F  + GGEKLLKA QCY
Sbjct: 64  NLATGLKEHVKLGPKITDTVKGKLSLGARILQVGGVEKVFMQLFSVKDGGEKLLKACQCY 123

Query: 299 LSTTAGPIAGLLFISTDKVAFCSERTMKVSSSMGEMLRIHYKVVIPLDKIKRANTITNTK 120
           +STT+GP+AGLLFISTDKVAFCS+R++K  SS G ++RIHYKVVIPL+KI+  N   + K
Sbjct: 124 ISTTSGPLAGLLFISTDKVAFCSDRSIKAYSSKGHLIRIHYKVVIPLEKIRSINQSQHVK 183

Query: 119 IPSQKYIEIVTGDNFDFWFMGFLNYQRTFRYLDQAISQ 6
            PSQKYIEIVT DNFDFWFMGFLNYQ+ F+YL QAISQ
Sbjct: 184 KPSQKYIEIVTVDNFDFWFMGFLNYQKAFKYLKQAISQ 221


>ref|XP_002306370.1| predicted protein [Populus trichocarpa] gi|222855819|gb|EEE93366.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score =  240 bits (612), Expect = 2e-61
 Identities = 129/218 (59%), Positives = 159/218 (72%), Gaps = 1/218 (0%)
 Frame = -2

Query: 656 IGIPISSAAYSSKKSFDSHLKDHNLEIQRYNPS-LNANSTFSQNKLELTNIRTNKLAERT 480
           IGIPI SAAYS +K     L   N E QRY P+  N + T  QNK +    R NKL ++ 
Sbjct: 9   IGIPIRSAAYSVEKM--PRLLLENAE-QRYIPTPANKSLTCKQNKTDSLLKRMNKLGKKA 65

Query: 479 ESFALRVRDHVKLGPRITDTLKGKLNLGVMILRVGGITKVFNQKFRTQGGEKLLKAFQCY 300
           + FA  +R+HVKLG RIT+TLKGKL+LG  I++VGG+ KVF Q F    GE+LLK  QCY
Sbjct: 66  DKFAHGIREHVKLGTRITETLKGKLSLGARIIQVGGVKKVFRQLFGVSEGERLLKVCQCY 125

Query: 299 LSTTAGPIAGLLFISTDKVAFCSERTMKVSSSMGEMLRIHYKVVIPLDKIKRANTITNTK 120
           LSTTAGPIAGLLF ST+K+AFCSER++K+SS  G++ RIHYKVVIPL K+K AN   N K
Sbjct: 126 LSTTAGPIAGLLFTSTEKIAFCSERSIKLSSPEGKLTRIHYKVVIPLRKVKTANQSENVK 185

Query: 119 IPSQKYIEIVTGDNFDFWFMGFLNYQRTFRYLDQAISQ 6
            P++KYIEIVT D+FDFWFMGF + Q+ F+ L QAI+Q
Sbjct: 186 KPTEKYIEIVTVDDFDFWFMGFFSCQKAFKSLQQAITQ 223


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