BLASTX nr result

ID: Bupleurum21_contig00018235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018235
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635247.1| PREDICTED: uncharacterized protein LOC100854...   222   5e-56
emb|CBI23464.3| unnamed protein product [Vitis vinifera]              222   5e-56
emb|CAN68806.1| hypothetical protein VITISV_001078 [Vitis vinifera]   222   5e-56
ref|XP_002304287.1| predicted protein [Populus trichocarpa] gi|2...   204   1e-50
ref|XP_002530663.1| retinoblastoma-binding protein, putative [Ri...   203   2e-50

>ref|XP_003635247.1| PREDICTED: uncharacterized protein LOC100854867 [Vitis vinifera]
          Length = 823

 Score =  222 bits (566), Expect = 5e-56
 Identities = 107/142 (75%), Positives = 123/142 (86%)
 Frame = -2

Query: 446 MAVYYKFKSAKDYDSIPLDGHFISVANLKEKIFETKRLGSGTDFDLVVANAQTNEEYVDD 267
           MAVYYKFKSAKD+DSIP+DGHFIS+ NLKEKIFETK LG GTDFDLVV NAQTNEEY+D+
Sbjct: 1   MAVYYKFKSAKDFDSIPIDGHFISIGNLKEKIFETKHLGRGTDFDLVVTNAQTNEEYLDE 60

Query: 266 GMLIPKNTSVLIRRVPGRPRMPIVTAPVVDQHEPEVDNMSEDLQATKSSFLGADLSVPKY 87
            MLIPKNTSVLIRRVPGRPRMPIVT    ++ EP+V+N  ++ Q T S+F+GAD S  KY
Sbjct: 61  AMLIPKNTSVLIRRVPGRPRMPIVT----EKDEPKVENKVDEAQPTNSNFVGADSSAMKY 116

Query: 86  PEDSEWDEFGNDLYAIPVVLPL 21
           P+DSEWDEFGNDLYAIP V+P+
Sbjct: 117 PDDSEWDEFGNDLYAIPEVVPV 138


>emb|CBI23464.3| unnamed protein product [Vitis vinifera]
          Length = 828

 Score =  222 bits (566), Expect = 5e-56
 Identities = 107/142 (75%), Positives = 123/142 (86%)
 Frame = -2

Query: 446 MAVYYKFKSAKDYDSIPLDGHFISVANLKEKIFETKRLGSGTDFDLVVANAQTNEEYVDD 267
           MAVYYKFKSAKD+DSIP+DGHFIS+ NLKEKIFETK LG GTDFDLVV NAQTNEEY+D+
Sbjct: 1   MAVYYKFKSAKDFDSIPIDGHFISIGNLKEKIFETKHLGRGTDFDLVVTNAQTNEEYLDE 60

Query: 266 GMLIPKNTSVLIRRVPGRPRMPIVTAPVVDQHEPEVDNMSEDLQATKSSFLGADLSVPKY 87
            MLIPKNTSVLIRRVPGRPRMPIVT    ++ EP+V+N  ++ Q T S+F+GAD S  KY
Sbjct: 61  AMLIPKNTSVLIRRVPGRPRMPIVT----EKDEPKVENKVDEAQPTNSNFVGADSSAMKY 116

Query: 86  PEDSEWDEFGNDLYAIPVVLPL 21
           P+DSEWDEFGNDLYAIP V+P+
Sbjct: 117 PDDSEWDEFGNDLYAIPEVVPV 138


>emb|CAN68806.1| hypothetical protein VITISV_001078 [Vitis vinifera]
          Length = 828

 Score =  222 bits (566), Expect = 5e-56
 Identities = 107/142 (75%), Positives = 123/142 (86%)
 Frame = -2

Query: 446 MAVYYKFKSAKDYDSIPLDGHFISVANLKEKIFETKRLGSGTDFDLVVANAQTNEEYVDD 267
           MAVYYKFKSAKD+DSIP+DGHFIS+ NLKEKIFETK LG GTDFDLVV NAQTNEEY+D+
Sbjct: 1   MAVYYKFKSAKDFDSIPIDGHFISIGNLKEKIFETKHLGRGTDFDLVVTNAQTNEEYLDE 60

Query: 266 GMLIPKNTSVLIRRVPGRPRMPIVTAPVVDQHEPEVDNMSEDLQATKSSFLGADLSVPKY 87
            MLIPKNTSVLIRRVPGRPRMPIVT    ++ EP+V+N  ++ Q T S+F+GAD S  KY
Sbjct: 61  AMLIPKNTSVLIRRVPGRPRMPIVT----EKDEPKVENKVDEAQPTNSNFVGADSSAMKY 116

Query: 86  PEDSEWDEFGNDLYAIPVVLPL 21
           P+DSEWDEFGNDLYAIP V+P+
Sbjct: 117 PDDSEWDEFGNDLYAIPEVVPV 138


>ref|XP_002304287.1| predicted protein [Populus trichocarpa] gi|222841719|gb|EEE79266.1|
           predicted protein [Populus trichocarpa]
          Length = 268

 Score =  204 bits (520), Expect = 1e-50
 Identities = 101/142 (71%), Positives = 116/142 (81%)
 Frame = -2

Query: 446 MAVYYKFKSAKDYDSIPLDGHFISVANLKEKIFETKRLGSGTDFDLVVANAQTNEEYVDD 267
           MAVYYKFKSA+DYDSIP+DG FISV  LKEKIFE+K LG GTDFDLVV NAQTNEEY+D+
Sbjct: 1   MAVYYKFKSARDYDSIPMDGPFISVGTLKEKIFESKHLGRGTDFDLVVTNAQTNEEYLDE 60

Query: 266 GMLIPKNTSVLIRRVPGRPRMPIVTAPVVDQHEPEVDNMSEDLQATKSSFLGADLSVPKY 87
            MLIPKNTSVLIRRVPGRPR+PIVT     + EP+++   ED    K SF+GAD S  +Y
Sbjct: 61  AMLIPKNTSVLIRRVPGRPRLPIVT-----EQEPKLETKVEDTLPEKGSFMGADSSSMRY 115

Query: 86  PEDSEWDEFGNDLYAIPVVLPL 21
            ED+EWDEFGNDLY+IP VLP+
Sbjct: 116 TEDNEWDEFGNDLYSIPDVLPV 137


>ref|XP_002530663.1| retinoblastoma-binding protein, putative [Ricinus communis]
           gi|223529796|gb|EEF31732.1| retinoblastoma-binding
           protein, putative [Ricinus communis]
          Length = 868

 Score =  203 bits (517), Expect = 2e-50
 Identities = 103/142 (72%), Positives = 114/142 (80%)
 Frame = -2

Query: 446 MAVYYKFKSAKDYDSIPLDGHFISVANLKEKIFETKRLGSGTDFDLVVANAQTNEEYVDD 267
           MAVYYKFKSA+DYDSI +DG FISV  LKEKIFE+K LG GTDFDLVV NAQTNEEY+D+
Sbjct: 1   MAVYYKFKSARDYDSIAMDGPFISVGVLKEKIFESKHLGRGTDFDLVVTNAQTNEEYLDE 60

Query: 266 GMLIPKNTSVLIRRVPGRPRMPIVTAPVVDQHEPEVDNMSEDLQATKSSFLGADLSVPKY 87
           GMLIPKNTSVLIRRVPGRPRMPIVT     + EP+V+N  E+    KSSF   D S  KY
Sbjct: 61  GMLIPKNTSVLIRRVPGRPRMPIVT-----EQEPKVENKVEETPLEKSSFSAPDSSAMKY 115

Query: 86  PEDSEWDEFGNDLYAIPVVLPL 21
            ED+EWDEFGNDLYAIP V P+
Sbjct: 116 TEDNEWDEFGNDLYAIPEVTPV 137


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