BLASTX nr result

ID: Bupleurum21_contig00018222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018222
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280389.1| PREDICTED: SWI/SNF complex subunit SWI3A [Vi...    55   6e-06
emb|CAN80839.1| hypothetical protein VITISV_043833 [Vitis vinifera]    55   6e-06

>ref|XP_002280389.1| PREDICTED: SWI/SNF complex subunit SWI3A [Vitis vinifera]
           gi|297734457|emb|CBI15704.3| unnamed protein product
           [Vitis vinifera]
          Length = 563

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/64 (40%), Positives = 42/64 (65%)
 Frame = +3

Query: 3   IEMQVKKLQCKMRCIDDLEVIMEKQHTEMXXXXXXXXXXRMNVLKRIFSKGISRLGDHTS 182
           IE Q+KKL CK++  +DLE+IMEK++T +          R+++L+R+F+ GISR  D  S
Sbjct: 495 IETQMKKLHCKIQHFEDLELIMEKEYTHLKELKESIIAERIDILQRVFNAGISRWRDPIS 554

Query: 183 TPAN 194
             ++
Sbjct: 555 VKSH 558


>emb|CAN80839.1| hypothetical protein VITISV_043833 [Vitis vinifera]
          Length = 563

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/64 (40%), Positives = 42/64 (65%)
 Frame = +3

Query: 3   IEMQVKKLQCKMRCIDDLEVIMEKQHTEMXXXXXXXXXXRMNVLKRIFSKGISRLGDHTS 182
           IE Q+KKL CK++  +DLE+IMEK++T +          R+++L+R+F+ GISR  D  S
Sbjct: 495 IETQMKKLHCKIQHFEDLELIMEKEYTHLKELKESIIAERIDILQRVFNAGISRWRDPIS 554

Query: 183 TPAN 194
             ++
Sbjct: 555 VKSH 558


Top