BLASTX nr result

ID: Bupleurum21_contig00018218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018218
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271596.1| PREDICTED: 28S ribosomal protein S29, mitoch...    55   8e-06

>ref|XP_002271596.1| PREDICTED: 28S ribosomal protein S29, mitochondrial [Vitis
           vinifera] gi|297745805|emb|CBI15861.3| unnamed protein
           product [Vitis vinifera]
          Length = 457

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 12/105 (11%)
 Frame = -3

Query: 280 AATHLSRT---------FATKK---TKQSAKIVKNEAKSKHKPKNKPEEFXXXXXXXSDD 137
           AAT  SRT         FA+ K   +  S+K  K+      K K+KP+         + D
Sbjct: 8   AATAASRTAPDRSIPAVFASSKLSSSNYSSKNTKSSLVKAKKAKSKPDAKSEEASAAAAD 67

Query: 136 TSVDNLANDDTRVRQLDLDEKDKSLDVGVDSRPLFTSAASISELT 2
             + +L +++ R R+L  D+KD SLDVG + R LFTSA +IS+L+
Sbjct: 68  DGLSDLLDEEARDRRLAEDDKDPSLDVGPNGRALFTSATTISQLS 112


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