BLASTX nr result

ID: Bupleurum21_contig00018209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018209
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527289.1| conserved hypothetical protein [Ricinus comm...   129   2e-28
gb|ABB87131.1| hypothetical protein [Solanum tuberosum]               127   7e-28
gb|ABB86244.1| unknown [Solanum tuberosum]                            127   7e-28
ref|XP_003521013.1| PREDICTED: protein FRIGIDA-like [Glycine max]     127   9e-28
ref|XP_002303026.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27

>ref|XP_002527289.1| conserved hypothetical protein [Ricinus communis]
           gi|223533382|gb|EEF35133.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 542

 Score =  129 bits (325), Expect = 2e-28
 Identities = 63/79 (79%), Positives = 72/79 (91%)
 Frame = -3

Query: 242 MADTYSVATLLESTTSKIQQLQKAFIELESHRAVTLNMKWKQLEEHFHGLEKSLKRRFNE 63
           M DT SV+TL++STTSKIQQLQKAF ELESHRAVTLN+KWK+LEEHFHGLE+SLKRRF+E
Sbjct: 1   MEDTESVSTLIDSTTSKIQQLQKAFAELESHRAVTLNLKWKELEEHFHGLERSLKRRFHE 60

Query: 62  LEDQEKKYVDKTINAQEIL 6
           LEDQEK+Y  KT  AQE+L
Sbjct: 61  LEDQEKEYATKTRRAQEML 79


>gb|ABB87131.1| hypothetical protein [Solanum tuberosum]
          Length = 548

 Score =  127 bits (320), Expect = 7e-28
 Identities = 62/79 (78%), Positives = 71/79 (89%)
 Frame = -3

Query: 242 MADTYSVATLLESTTSKIQQLQKAFIELESHRAVTLNMKWKQLEEHFHGLEKSLKRRFNE 63
           M DT SVATL++STTSKIQQLQKAF ELESHRAVTLN+KWKQLEEHFHGLEKSLKRRF E
Sbjct: 1   MEDTQSVATLMDSTTSKIQQLQKAFAELESHRAVTLNLKWKQLEEHFHGLEKSLKRRFTE 60

Query: 62  LEDQEKKYVDKTINAQEIL 6
           LEDQEK++  K + +++IL
Sbjct: 61  LEDQEKEFETKIVQSKKIL 79


>gb|ABB86244.1| unknown [Solanum tuberosum]
          Length = 548

 Score =  127 bits (320), Expect = 7e-28
 Identities = 62/79 (78%), Positives = 71/79 (89%)
 Frame = -3

Query: 242 MADTYSVATLLESTTSKIQQLQKAFIELESHRAVTLNMKWKQLEEHFHGLEKSLKRRFNE 63
           M DT SVATL++STTSKIQQLQKAF ELESHRAVTLN+KWKQLEEHFHGLEKSLKRRF E
Sbjct: 1   MEDTQSVATLMDSTTSKIQQLQKAFAELESHRAVTLNLKWKQLEEHFHGLEKSLKRRFTE 60

Query: 62  LEDQEKKYVDKTINAQEIL 6
           LEDQEK++  K + +++IL
Sbjct: 61  LEDQEKEFETKIVQSKKIL 79


>ref|XP_003521013.1| PREDICTED: protein FRIGIDA-like [Glycine max]
          Length = 544

 Score =  127 bits (319), Expect = 9e-28
 Identities = 63/79 (79%), Positives = 73/79 (92%)
 Frame = -3

Query: 242 MADTYSVATLLESTTSKIQQLQKAFIELESHRAVTLNMKWKQLEEHFHGLEKSLKRRFNE 63
           M D+ SVATL++STTSKIQQLQKAF ELES+RAVTLN+KWK+LEEHFHGLEKSLKRRF+E
Sbjct: 1   MEDSDSVATLIDSTTSKIQQLQKAFAELESYRAVTLNLKWKELEEHFHGLEKSLKRRFHE 60

Query: 62  LEDQEKKYVDKTINAQEIL 6
           LEDQEK++ +KT  AQEIL
Sbjct: 61  LEDQEKEFENKTRKAQEIL 79


>ref|XP_002303026.1| predicted protein [Populus trichocarpa] gi|222844752|gb|EEE82299.1|
           predicted protein [Populus trichocarpa]
          Length = 544

 Score =  126 bits (317), Expect = 2e-27
 Identities = 62/79 (78%), Positives = 71/79 (89%)
 Frame = -3

Query: 242 MADTYSVATLLESTTSKIQQLQKAFIELESHRAVTLNMKWKQLEEHFHGLEKSLKRRFNE 63
           M DT  VATL++STTS+IQQLQKAF ELESHRAVTLN+KWK+LEEHFHGLE+SLKRRF+E
Sbjct: 1   MEDTEPVATLMDSTTSRIQQLQKAFAELESHRAVTLNLKWKELEEHFHGLERSLKRRFHE 60

Query: 62  LEDQEKKYVDKTINAQEIL 6
           LEDQEK+Y  KT  A+EIL
Sbjct: 61  LEDQEKQYETKTRRAREIL 79


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