BLASTX nr result

ID: Bupleurum21_contig00018203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018203
         (645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520450.1| hypothetical protein RCOM_0731250 [Ricinus c...   108   9e-22
emb|CBI16022.3| unnamed protein product [Vitis vinifera]              107   2e-21
emb|CAN64434.1| hypothetical protein VITISV_000937 [Vitis vinifera]   107   2e-21
ref|XP_002298329.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_004169561.1| PREDICTED: uncharacterized protein LOC101227...    99   5e-19

>ref|XP_002520450.1| hypothetical protein RCOM_0731250 [Ricinus communis]
            gi|223540292|gb|EEF41863.1| hypothetical protein
            RCOM_0731250 [Ricinus communis]
          Length = 1329

 Score =  108 bits (270), Expect = 9e-22
 Identities = 47/78 (60%), Positives = 61/78 (78%)
 Frame = +1

Query: 1    RRRMPTSMGWCRICKVDCDTVDGLDLHSQTTEHQQRTMDMVISIKQQNSKRQKMSKDHTS 180
            RRR  +SMGWCRICKVDC+TV+GLDLHSQT EHQ+R MDMV++IKQ   K++  + DH+S
Sbjct: 1251 RRRKSSSMGWCRICKVDCETVEGLDLHSQTREHQKRAMDMVVTIKQNAKKQKLANNDHSS 1310

Query: 181  TEDGSRARNPGNRGRGKK 234
             +D S+++N    GRG K
Sbjct: 1311 VDDASKSKNTSIEGRGNK 1328


>emb|CBI16022.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  107 bits (266), Expect = 2e-21
 Identities = 48/77 (62%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
 Frame = +1

Query: 1    RRRMPTSMGWCRICKVDCDTVDGLDLHSQTTEHQQRTMDMVISIKQQNSKRQKM-SKDHT 177
            R+R P SM WCRIC +DC+TVDGLD+HSQT EHQQ  MD+V+SIKQQN+K+QK+ SKDH+
Sbjct: 1588 RKRKPLSMAWCRICNIDCETVDGLDMHSQTREHQQMAMDIVLSIKQQNAKKQKLTSKDHS 1647

Query: 178  STEDGSRARNPGNRGRG 228
            + ED S+++    RG G
Sbjct: 1648 TPEDSSKSKKGVLRGGG 1664


>emb|CAN64434.1| hypothetical protein VITISV_000937 [Vitis vinifera]
          Length = 1131

 Score =  107 bits (266), Expect = 2e-21
 Identities = 48/77 (62%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
 Frame = +1

Query: 1    RRRMPTSMGWCRICKVDCDTVDGLDLHSQTTEHQQRTMDMVISIKQQNSKRQKM-SKDHT 177
            R+R P SM WCRIC +DC+TVDGLD+HSQT EHQQ  MD+V+SIKQQN+K+QK+ SKDH+
Sbjct: 1050 RKRKPLSMAWCRICNIDCETVDGLDMHSQTREHQQMAMDIVLSIKQQNAKKQKLTSKDHS 1109

Query: 178  STEDGSRARNPGNRGRG 228
            + ED S+++    RG G
Sbjct: 1110 TPEDSSKSKKGVLRGGG 1126


>ref|XP_002298329.1| predicted protein [Populus trichocarpa] gi|222845587|gb|EEE83134.1|
            predicted protein [Populus trichocarpa]
          Length = 1327

 Score =  100 bits (250), Expect = 2e-19
 Identities = 45/77 (58%), Positives = 55/77 (71%)
 Frame = +1

Query: 4    RRMPTSMGWCRICKVDCDTVDGLDLHSQTTEHQQRTMDMVISIKQQNSKRQKMSKDHTST 183
            R+  +SMGWCRICKVDC+T +GLDLHSQT EHQ+  MDMV++IKQ   K +    DH+S 
Sbjct: 1250 RKRKSSMGWCRICKVDCETFEGLDLHSQTREHQKMAMDMVVTIKQNVKKHKSAPSDHSSL 1309

Query: 184  EDGSRARNPGNRGRGKK 234
            ED S+ RN    GRG K
Sbjct: 1310 EDTSKLRNASFEGRGNK 1326


>ref|XP_004169561.1| PREDICTED: uncharacterized protein LOC101227701 [Cucumis sativus]
          Length = 538

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 48/78 (61%), Positives = 62/78 (79%)
 Frame = +1

Query: 1   RRRMPTSMGWCRICKVDCDTVDGLDLHSQTTEHQQRTMDMVISIKQQNSKRQKMSKDHTS 180
           R+R P SMGWCRICKVDC+TV+GL+LHSQT EHQ+  MDMV SIK QN+K+ K++ +  S
Sbjct: 462 RKRKPISMGWCRICKVDCETVEGLELHSQTREHQKMAMDMVQSIK-QNAKKHKVTPNDHS 520

Query: 181 TEDGSRARNPGNRGRGKK 234
           +EDG +++N G   RGKK
Sbjct: 521 SEDG-KSKNVGLESRGKK 537


Top