BLASTX nr result
ID: Bupleurum21_contig00018188
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00018188
(1452 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004155261.1| PREDICTED: CCR4-NOT transcription complex su... 202 3e-90
ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT tra... 202 8e-89
ref|XP_003521090.1| PREDICTED: CCR4-NOT transcription complex su... 210 8e-89
ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex su... 210 1e-87
emb|CBI16596.3| unnamed protein product [Vitis vinifera] 214 1e-85
>ref|XP_004155261.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Cucumis
sativus]
Length = 962
Score = 202 bits (515), Expect(4) = 3e-90
Identities = 89/147 (60%), Positives = 112/147 (76%)
Frame = -1
Query: 966 LDNCQNTYLIFCSAISGSSLSDLPHVDSWNVDVLIESIKQLAPGINWINVFENLDHEGFY 787
L++ +N Y F A+ S LSDLP ++SW+VDVL++++KQLAP ++WI V ENLDHEGFY
Sbjct: 282 LEDSRNIYATFSLALGFSGLSDLPSLNSWDVDVLLDTVKQLAPKVDWIRVMENLDHEGFY 341
Query: 786 IPNEASFAFLMSTYMHACQELFPLHAVCGSVWKNAEGQLSFSRHAVSVPPEVFSFAHSGR 607
IPNE +F+F MS Y ACQ+ FPLH +CGSVWKN EGQ+SF +HAV PPE+F+FAHSGR
Sbjct: 342 IPNEEAFSFFMSVYRRACQDAFPLHTICGSVWKNMEGQISFLKHAVLAPPEIFTFAHSGR 401
Query: 606 QLAYADAVNDHKFHLVHANHAWLCPDL 526
QLAY D ++ K L H N AW C DL
Sbjct: 402 QLAYIDGLHGDKLQLEHTNQAWTCLDL 428
Score = 122 bits (307), Expect(4) = 3e-90
Identities = 59/117 (50%), Positives = 92/117 (78%), Gaps = 1/117 (0%)
Frame = -2
Query: 1451 LNRPNFSTLLCQSVRRCHLMKISWR-VCKDLQLAAPGRIVIGLALSESENLDVKMCGKIF 1275
L+RPNFST+LC+S++ + +++ + L L+ RI +GLA+S+SENLD ++CGK F
Sbjct: 77 LDRPNFSTILCESLKSRDINQVTLENISNLLNLSMCERIGVGLAVSDSENLDARLCGKNF 136
Query: 1274 CINQIVQLCSNHESLDSAEQIQNILIFLNQSKGLCEHVDSFMEILSLVHLKEDSEFI 1104
CI+QI +LC+N S+DS +QIQ+I++FL +S+GL +H+DSFM++LSLV LK+ +EF+
Sbjct: 137 CISQIEELCANAVSVDSTQQIQDIIMFLQRSEGLSKHLDSFMQMLSLVQLKDVTEFV 193
Score = 52.4 bits (124), Expect(4) = 3e-90
Identities = 23/42 (54%), Positives = 33/42 (78%)
Frame = -3
Query: 1087 LREVNFFRNLDMLNEGSENEFDTILAEMEKEFSMAELMKEFG 962
LRE F R++++ +E +N+FD+ILAEMEKE SM ++MKE G
Sbjct: 202 LREEKFLRDVNLSHESLDNDFDSILAEMEKEMSMGDIMKELG 243
Score = 25.0 bits (53), Expect(4) = 3e-90
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -3
Query: 526 LEVLCQLAERGH 491
L +LC+LAERGH
Sbjct: 429 LAILCELAERGH 440
>ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT transcription complex
subunit 1-like [Cucumis sativus]
Length = 2427
Score = 202 bits (514), Expect(4) = 8e-89
Identities = 89/147 (60%), Positives = 112/147 (76%)
Frame = -1
Query: 966 LDNCQNTYLIFCSAISGSSLSDLPHVDSWNVDVLIESIKQLAPGINWINVFENLDHEGFY 787
L++ +N Y F A+ S LSDLP ++SW+VDVL++++KQLAP ++WI V ENLDHEGFY
Sbjct: 283 LEDSRNIYSTFSLALGFSGLSDLPSLNSWDVDVLLDTVKQLAPKVDWIRVMENLDHEGFY 342
Query: 786 IPNEASFAFLMSTYMHACQELFPLHAVCGSVWKNAEGQLSFSRHAVSVPPEVFSFAHSGR 607
IPNE +F+F MS Y ACQ+ FPLH +CGSVWKN EGQ+SF +HAV PPE+F+FAHSGR
Sbjct: 343 IPNEEAFSFFMSVYRRACQDAFPLHTICGSVWKNMEGQISFLKHAVLAPPEIFTFAHSGR 402
Query: 606 QLAYADAVNDHKFHLVHANHAWLCPDL 526
QLAY D ++ K L H N AW C DL
Sbjct: 403 QLAYIDGLHGDKLQLEHTNQAWTCLDL 429
Score = 122 bits (307), Expect(4) = 8e-89
Identities = 59/117 (50%), Positives = 92/117 (78%), Gaps = 1/117 (0%)
Frame = -2
Query: 1451 LNRPNFSTLLCQSVRRCHLMKISWR-VCKDLQLAAPGRIVIGLALSESENLDVKMCGKIF 1275
L+RPNFST+LC+S++ + +++ + L L+ RI +GLA+S+SENLD ++CGK F
Sbjct: 77 LDRPNFSTILCESLKSRDINQVTLENISNLLNLSMCERIGVGLAVSDSENLDARLCGKNF 136
Query: 1274 CINQIVQLCSNHESLDSAEQIQNILIFLNQSKGLCEHVDSFMEILSLVHLKEDSEFI 1104
CI+QI +LC+N S+DS +QIQ+I++FL +S+GL +H+DSFM++LSLV LK+ +EF+
Sbjct: 137 CISQIEELCANAVSVDSTQQIQDIIMFLQRSEGLSKHLDSFMQMLSLVQLKDVTEFV 193
Score = 47.8 bits (112), Expect(4) = 8e-89
Identities = 23/43 (53%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Frame = -3
Query: 1087 LREVNFFR-NLDMLNEGSENEFDTILAEMEKEFSMAELMKEFG 962
LRE F R ++++ +E +N+FD+ILAEMEKE SM ++MKE G
Sbjct: 202 LREEKFLRWDVNLSHESLDNDFDSILAEMEKEMSMGDIMKELG 244
Score = 25.0 bits (53), Expect(4) = 8e-89
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -3
Query: 526 LEVLCQLAERGH 491
L +LC+LAERGH
Sbjct: 430 LAILCELAERGH 441
Score = 186 bits (471), Expect(2) = 3e-45
Identities = 93/124 (75%), Positives = 109/124 (87%)
Frame = -1
Query: 447 YLAIVAEVPGIILRCISRDEAALAVAQKVFKGLYENESSNAHIGVHLAILAAIRDVSKLV 268
+ ++AEVP IILRCISRDEAALAVAQKVFK LY+N S+ H+G HLAIL AIRDV KLV
Sbjct: 1682 FQGVIAEVPEIILRCISRDEAALAVAQKVFKVLYDNASNTFHVGAHLAILIAIRDVCKLV 1741
Query: 267 VKELTSWVIYSDKDRKFNTDITVGLIRSDLLYLAEYKVHMAKLLDAGRNKAATDFAVSLI 88
VKELTSWVIYS+++RK+N DIT+GLIRS+LL LAEY VHMAKL+D GRNKAAT+FA+SL+
Sbjct: 1742 VKELTSWVIYSEEERKYNKDITLGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFAISLL 1801
Query: 87 *TLV 76
TLV
Sbjct: 1802 QTLV 1805
Score = 24.3 bits (51), Expect(2) = 3e-45
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = -2
Query: 38 DALAKLAARPGS 3
DALAK+AA+PGS
Sbjct: 1820 DALAKVAAKPGS 1831
>ref|XP_003521090.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Glycine
max]
Length = 2327
Score = 210 bits (535), Expect(4) = 8e-89
Identities = 94/147 (63%), Positives = 119/147 (80%)
Frame = -1
Query: 966 LDNCQNTYLIFCSAISGSSLSDLPHVDSWNVDVLIESIKQLAPGINWINVFENLDHEGFY 787
L++ QNTYL F +A G ++ +LP ++SWN+DVLI+++K LAP NW+ V ENLDHEGF+
Sbjct: 289 LEDNQNTYLTFRAA-HGYNVPELPPLNSWNIDVLIDTLKHLAPHTNWVRVIENLDHEGFF 347
Query: 786 IPNEASFAFLMSTYMHACQELFPLHAVCGSVWKNAEGQLSFSRHAVSVPPEVFSFAHSGR 607
+P+E +F+FLMS Y HAC+E FPLHA+CG VWKN EGQLSF ++AVS PPE+F+FAHSGR
Sbjct: 348 LPSEEAFSFLMSVYKHACKEPFPLHAICGPVWKNTEGQLSFLKYAVSAPPEIFTFAHSGR 407
Query: 606 QLAYADAVNDHKFHLVHANHAWLCPDL 526
QLAY DA+N HK HANHAWLC DL
Sbjct: 408 QLAYVDAINGHKLQNGHANHAWLCLDL 434
Score = 111 bits (278), Expect(4) = 8e-89
Identities = 56/117 (47%), Positives = 81/117 (69%), Gaps = 1/117 (0%)
Frame = -2
Query: 1451 LNRPNFSTLLCQSVRRCHLMKISWR-VCKDLQLAAPGRIVIGLALSESENLDVKMCGKIF 1275
L++PNFST+ +S++ + + C LQL+ +I+ LALS+SEN DV++CGKIF
Sbjct: 84 LDKPNFSTVFSESMKNIEINESFLESFCNGLQLSLLEKIISSLALSDSENSDVRLCGKIF 143
Query: 1274 CINQIVQLCSNHESLDSAEQIQNILIFLNQSKGLCEHVDSFMEILSLVHLKEDSEFI 1104
C+ QI +LC+N L EQI N+++FL QS+GL +HVDSFM+ILSLV K+ F+
Sbjct: 144 CMAQIEELCANPGYLSFHEQIHNVIMFLKQSEGLSKHVDSFMQILSLVQFKDTPPFV 200
Score = 48.1 bits (113), Expect(4) = 8e-89
Identities = 17/42 (40%), Positives = 32/42 (76%)
Frame = -3
Query: 1087 LREVNFFRNLDMLNEGSENEFDTILAEMEKEFSMAELMKEFG 962
+ E +F RN+++ ++ EN+FD ILA+++KE +M +++KE G
Sbjct: 209 MHEADFLRNMELFHDSGENDFDAILADIQKEMNMGDIVKELG 250
Score = 27.7 bits (60), Expect(4) = 8e-89
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -3
Query: 526 LEVLCQLAERGHLS 485
L+VLCQLAE+GH S
Sbjct: 435 LDVLCQLAEKGHAS 448
Score = 179 bits (454), Expect(2) = 9e-43
Identities = 87/121 (71%), Positives = 106/121 (87%)
Frame = -1
Query: 438 IVAEVPGIILRCISRDEAALAVAQKVFKGLYENESSNAHIGVHLAILAAIRDVSKLVVKE 259
+++EVP IILRC+SRDEAALAVAQKVF+GLY+N S+N H+ HLAIL AIRDV KL VKE
Sbjct: 1613 VISEVPEIILRCVSRDEAALAVAQKVFRGLYDNASNNIHVTAHLAILTAIRDVCKLAVKE 1672
Query: 258 LTSWVIYSDKDRKFNTDITVGLIRSDLLYLAEYKVHMAKLLDAGRNKAATDFAVSLI*TL 79
LTSWVIYS+++RK+N +ITVGLIRS+LL L EY VHMAKL+D GRNKAA +F++SL+ TL
Sbjct: 1673 LTSWVIYSEEERKYNKEITVGLIRSELLNLTEYNVHMAKLIDGGRNKAAMEFSISLLQTL 1732
Query: 78 V 76
V
Sbjct: 1733 V 1733
Score = 22.3 bits (46), Expect(2) = 9e-43
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -2
Query: 38 DALAKLAARPG 6
DALAKLA +PG
Sbjct: 1748 DALAKLATKPG 1758
>ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Glycine
max]
Length = 2424
Score = 210 bits (535), Expect(4) = 1e-87
Identities = 93/147 (63%), Positives = 120/147 (81%)
Frame = -1
Query: 966 LDNCQNTYLIFCSAISGSSLSDLPHVDSWNVDVLIESIKQLAPGINWINVFENLDHEGFY 787
L++ QNTYL F +A G ++S+LP ++SWN+DVLI+++ LAP NW+ V E+LDHEGF+
Sbjct: 288 LEDSQNTYLTFRAA-HGYNVSELPPLNSWNIDVLIDTLMHLAPHTNWVRVIESLDHEGFF 346
Query: 786 IPNEASFAFLMSTYMHACQELFPLHAVCGSVWKNAEGQLSFSRHAVSVPPEVFSFAHSGR 607
+P+E +F+FLMS Y HAC+E FPLHA+CGS+WKN EGQLSF ++AVS PPE+F+FAHSGR
Sbjct: 347 LPSEEAFSFLMSVYKHACKEPFPLHAICGSIWKNTEGQLSFLKYAVSAPPEIFTFAHSGR 406
Query: 606 QLAYADAVNDHKFHLVHANHAWLCPDL 526
QLAY DA+N HK HANHAWLC DL
Sbjct: 407 QLAYVDAINGHKLQNGHANHAWLCLDL 433
Score = 107 bits (268), Expect(4) = 1e-87
Identities = 53/117 (45%), Positives = 80/117 (68%), Gaps = 1/117 (0%)
Frame = -2
Query: 1451 LNRPNFSTLLCQSVRRCHLMKISWR-VCKDLQLAAPGRIVIGLALSESENLDVKMCGKIF 1275
L++PNFST+ +S++ + + C L L+ +I+I LALS+SEN DV++CGK F
Sbjct: 83 LDKPNFSTVFSESMKNIEINESFLESFCNGLPLSLLEKIIISLALSDSENPDVRLCGKFF 142
Query: 1274 CINQIVQLCSNHESLDSAEQIQNILIFLNQSKGLCEHVDSFMEILSLVHLKEDSEFI 1104
C+ +I +LC+N SL EQ+ N+++FL QS+G +HVDSFM+ILSLV K+ F+
Sbjct: 143 CMARIEELCANPGSLSFHEQMHNVIMFLKQSEGFSKHVDSFMQILSLVQFKDTPPFV 199
Score = 48.1 bits (113), Expect(4) = 1e-87
Identities = 17/42 (40%), Positives = 32/42 (76%)
Frame = -3
Query: 1087 LREVNFFRNLDMLNEGSENEFDTILAEMEKEFSMAELMKEFG 962
+ E +F RN+++ ++ EN+FD ILA+++KE +M +++KE G
Sbjct: 208 MHEADFLRNMELFHDSGENDFDAILADIQKEMNMGDIVKELG 249
Score = 27.7 bits (60), Expect(4) = 1e-87
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -3
Query: 526 LEVLCQLAERGHLS 485
L+VLCQLAE+GH S
Sbjct: 434 LDVLCQLAEKGHAS 447
Score = 182 bits (462), Expect(2) = 1e-43
Identities = 88/121 (72%), Positives = 107/121 (88%)
Frame = -1
Query: 438 IVAEVPGIILRCISRDEAALAVAQKVFKGLYENESSNAHIGVHLAILAAIRDVSKLVVKE 259
+++EVP IILRC+SRDEAALAVAQKVF+GLY+N S+N H+ HLAIL AIRDV KL VKE
Sbjct: 1684 VISEVPEIILRCVSRDEAALAVAQKVFRGLYDNASNNIHVSAHLAILTAIRDVCKLAVKE 1743
Query: 258 LTSWVIYSDKDRKFNTDITVGLIRSDLLYLAEYKVHMAKLLDAGRNKAATDFAVSLI*TL 79
LTSWVIYS+++RK+N +ITVGLIRS+LL L EY VHMAKL+D GRNKAAT+F++SL+ TL
Sbjct: 1744 LTSWVIYSEEERKYNKEITVGLIRSELLNLTEYNVHMAKLIDGGRNKAATEFSISLLQTL 1803
Query: 78 V 76
V
Sbjct: 1804 V 1804
Score = 22.3 bits (46), Expect(2) = 1e-43
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -2
Query: 38 DALAKLAARPG 6
DALAKLA +PG
Sbjct: 1819 DALAKLATKPG 1829
>emb|CBI16596.3| unnamed protein product [Vitis vinifera]
Length = 2452
Score = 214 bits (545), Expect(4) = 1e-85
Identities = 95/147 (64%), Positives = 118/147 (80%)
Frame = -1
Query: 966 LDNCQNTYLIFCSAISGSSLSDLPHVDSWNVDVLIESIKQLAPGINWINVFENLDHEGFY 787
L + QNT++ SA+ +SLS+LP + SWN+++LI+S+KQLAPG NWI V E LDHEGFY
Sbjct: 310 LGDNQNTFVESLSALGSNSLSELPLLSSWNIEILIDSVKQLAPGTNWIGVIEKLDHEGFY 369
Query: 786 IPNEASFAFLMSTYMHACQELFPLHAVCGSVWKNAEGQLSFSRHAVSVPPEVFSFAHSGR 607
+PN +F+FLM+ Y HAC + FPLHA+CGSVWKN +GQLSF ++AVS PPE+F+FAHS R
Sbjct: 370 VPNYDAFSFLMAAYRHACPDQFPLHAICGSVWKNVQGQLSFLKYAVSAPPEIFTFAHSAR 429
Query: 606 QLAYADAVNDHKFHLVHANHAWLCPDL 526
QLAY DAV HKF L HANHAWLC DL
Sbjct: 430 QLAYVDAVYGHKFQLGHANHAWLCLDL 456
Score = 101 bits (251), Expect(4) = 1e-85
Identities = 51/116 (43%), Positives = 80/116 (68%), Gaps = 1/116 (0%)
Frame = -2
Query: 1448 NRPNFSTLLCQSVRRCHLM-KISWRVCKDLQLAAPGRIVIGLALSESENLDVKMCGKIFC 1272
+RPNF T+ CQS+R + + + L +A +I IGLAL +SE+L+ + CGK FC
Sbjct: 106 DRPNFCTIFCQSLRSTAISERFLENLSNTLHFSACEKIGIGLALLDSEHLEFRTCGKNFC 165
Query: 1271 INQIVQLCSNHESLDSAEQIQNILIFLNQSKGLCEHVDSFMEILSLVHLKEDSEFI 1104
+ QI +LC+N + S EQIQNI+++L+Q++GL +DSF+++LSLVHL+ + F+
Sbjct: 166 MAQIEELCANPVPMKSVEQIQNIIMYLHQAEGLYPLLDSFIQMLSLVHLERGASFV 221
Score = 44.7 bits (104), Expect(4) = 1e-85
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = -3
Query: 1087 LREVNFFRNLDMLNEGSENEFDTILAEMEKEFSMAELMKEFG 962
LR+ N +LD+ E EN+FD ILAEMEKE ++ +M E G
Sbjct: 230 LRKANLLGDLDLFCESRENDFDAILAEMEKERNVDNIMMELG 271
Score = 26.9 bits (58), Expect(4) = 1e-85
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -3
Query: 526 LEVLCQLAERGH 491
L VLCQLAERGH
Sbjct: 457 LSVLCQLAERGH 468
Score = 173 bits (438), Expect(2) = 5e-41
Identities = 90/131 (68%), Positives = 107/131 (81%)
Frame = -1
Query: 468 NSLNEHFYLAIVAEVPGIILRCISRDEAALAVAQKVFKGLYENESSNAHIGVHLAILAAI 289
N +E +VAEVP II RC SRDEAALAVAQKVFKGLY + S+++++ +LAIL AI
Sbjct: 1693 NGASESELQGLVAEVPEIIHRCASRDEAALAVAQKVFKGLYADASNSSNVAAYLAILVAI 1752
Query: 288 RDVSKLVVKELTSWVIYSDKDRKFNTDITVGLIRSDLLYLAEYKVHMAKLLDAGRNKAAT 109
RD+ KLVVKELTSWVIYSD++RKFN DI + LIRS+LL LAEY VHMAKL+D GRNKAAT
Sbjct: 1753 RDLCKLVVKELTSWVIYSDEERKFNKDIIISLIRSELLNLAEYNVHMAKLVDGGRNKAAT 1812
Query: 108 DFAVSLI*TLV 76
+FA SL+ TLV
Sbjct: 1813 EFAFSLLQTLV 1823
Score = 22.7 bits (47), Expect(2) = 5e-41
Identities = 8/12 (66%), Positives = 12/12 (100%)
Frame = -2
Query: 38 DALAKLAARPGS 3
DA+AK+A++PGS
Sbjct: 1838 DAMAKIASKPGS 1849