BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018169
         (1500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containi...   624   e-176
ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containi...   611   e-172
ref|XP_002529915.1| pentatricopeptide repeat-containing protein,...   602   e-170
ref|NP_199684.2| pentatricopeptide repeat-containing protein [Ar...   597   e-168
ref|XP_002303044.1| predicted protein [Populus trichocarpa] gi|2...   586   e-165

>ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
            chloroplastic-like [Vitis vinifera]
            gi|297744374|emb|CBI37344.3| unnamed protein product
            [Vitis vinifera]
          Length = 497

 Score =  624 bits (1609), Expect = e-176
 Identities = 300/384 (78%), Positives = 343/384 (89%)
 Frame = -1

Query: 1500 TVLEALHERITALRWESALKVFELLQEQLWYKPNSANYVKLIVMLGKCKQPEKAHSLFQA 1321
            TVLEALHERITALRWESALKVFELL+EQLWY+PNS  Y+KLIVMLGKCKQPEKAH+LF A
Sbjct: 104  TVLEALHERITALRWESALKVFELLREQLWYRPNSGIYIKLIVMLGKCKQPEKAHALFLA 163

Query: 1320 MVDEGCVVNVESYTALLSAYSRSGHLHEAFYLLEEMKNTPNCHPDVFTYSILIKSCLQVY 1141
            M+DEGCVVN E+YTALLSAYSRSG   +AF LLE+MKNTP+C PDV TYS+LIKSCLQV 
Sbjct: 164  MIDEGCVVNHEAYTALLSAYSRSGLFDKAFSLLEKMKNTPDCQPDVHTYSVLIKSCLQVV 223

Query: 1140 AFDKVQYLLSDMRSRGVKPNTITYNTLIDSYGKAKKFTQMESILVEMLNQQEVKPDVWTM 961
            AFDKV  LLSDM ++G+KPNT+TYNTLID+YGKAK+F +MES L+EML + + +PDVWTM
Sbjct: 224  AFDKVPVLLSDMANQGIKPNTVTYNTLIDAYGKAKRFAEMESTLLEMLREGKCEPDVWTM 283

Query: 960  NSTLRAFGNSGQIEMMEKCYEKFQCAGIEPSIKTFNILLDSYGKTGNYEKMSAVMQYMEK 781
            NSTLRAFG+SGQIE MEKCYEKFQ AGIEP+IKTFNILLDSYGK   YEKMSAVM+YM+K
Sbjct: 284  NSTLRAFGSSGQIETMEKCYEKFQSAGIEPNIKTFNILLDSYGKAEKYEKMSAVMEYMQK 343

Query: 780  YHFSWTLVTYNVVIDAFGRAGDLKQMEFLFRLMQSERIKPNCVTLCSIVRAYGKAGKAEK 601
            YHFSWT+VTYNVVIDAFGRAGDLKQME+LFRLM+SERIKP+CVTLCS+VRAYG+AGKAEK
Sbjct: 344  YHFSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGRAGKAEK 403

Query: 600  ITGVLRFVENSDVTLDTIFFNCLVDAFGMMGCVAEMKNVLELMERKGCKPDKITYRTMIK 421
            I GVLRF+ENSDV LD +FFNCLVDA+G +GC AEMK VLE+M++KGCKPDKITYRTMIK
Sbjct: 404  IGGVLRFIENSDVMLDIVFFNCLVDAYGRLGCFAEMKGVLEMMKKKGCKPDKITYRTMIK 463

Query: 420  AYSMSNMTSQVKEFKAVLAAMERT 349
            AY +  MTS  KE + ++   + T
Sbjct: 464  AYKIGGMTSCAKELQGLMRMPDET 487


>ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
            chloroplastic-like [Glycine max]
          Length = 515

 Score =  611 bits (1576), Expect = e-172
 Identities = 290/383 (75%), Positives = 341/383 (89%)
 Frame = -1

Query: 1500 TVLEALHERITALRWESALKVFELLQEQLWYKPNSANYVKLIVMLGKCKQPEKAHSLFQA 1321
            TVLEALHER+TALRWESALKVFELL EQ+WYKP++  Y+KLIVMLGKCKQPEKAH LFQA
Sbjct: 123  TVLEALHERVTALRWESALKVFELLHEQIWYKPDTGVYIKLIVMLGKCKQPEKAHELFQA 182

Query: 1320 MVDEGCVVNVESYTALLSAYSRSGHLHEAFYLLEEMKNTPNCHPDVFTYSILIKSCLQVY 1141
            MVDEGCV++ ESYTALLSAYSRSG L +AF LLEEMKNTP C PDV TYSIL+KSCLQV+
Sbjct: 183  MVDEGCVLDCESYTALLSAYSRSGLLDKAFSLLEEMKNTPGCQPDVQTYSILLKSCLQVF 242

Query: 1140 AFDKVQYLLSDMRSRGVKPNTITYNTLIDSYGKAKKFTQMESILVEMLNQQEVKPDVWTM 961
            AFDK+Q LLSDM +RG+KPNT+TYNTLID+YGKA+KF++MESILVEML  +  +PDVWTM
Sbjct: 243  AFDKIQSLLSDMTNRGIKPNTVTYNTLIDAYGKARKFSEMESILVEMLADRYCQPDVWTM 302

Query: 960  NSTLRAFGNSGQIEMMEKCYEKFQCAGIEPSIKTFNILLDSYGKTGNYEKMSAVMQYMEK 781
            NSTLRAFGN GQIE MEKCYEKFQ AGI+P+++TFNILLDSYGK  +Y+KMSAVM+YM+K
Sbjct: 303  NSTLRAFGNIGQIETMEKCYEKFQNAGIQPNVQTFNILLDSYGKAQDYKKMSAVMEYMQK 362

Query: 780  YHFSWTLVTYNVVIDAFGRAGDLKQMEFLFRLMQSERIKPNCVTLCSIVRAYGKAGKAEK 601
            YH+SWT+VT+N+VIDAFG+AGDLKQME+LFRLM+SERIKP+CVTLCS+VRAY +AGK EK
Sbjct: 363  YHYSWTIVTFNIVIDAFGKAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEK 422

Query: 600  ITGVLRFVENSDVTLDTIFFNCLVDAFGMMGCVAEMKNVLELMERKGCKPDKITYRTMIK 421
            I+GVLRFVENSDV LDT+FFNCLVDA+  +GC+AEMK VLE+M++ GCKPD +TYRTMIK
Sbjct: 423  ISGVLRFVENSDVLLDTVFFNCLVDAYARLGCLAEMKGVLEMMKQNGCKPDIVTYRTMIK 482

Query: 420  AYSMSNMTSQVKEFKAVLAAMER 352
             Y+   M S  KE + +L  + R
Sbjct: 483  TYTYKGMDSHAKELRELLPTVNR 505


>ref|XP_002529915.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223530592|gb|EEF32469.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 636

 Score =  602 bits (1553), Expect = e-170
 Identities = 293/380 (77%), Positives = 334/380 (87%)
 Frame = -1

Query: 1500 TVLEALHERITALRWESALKVFELLQEQLWYKPNSANYVKLIVMLGKCKQPEKAHSLFQA 1321
            TVLEALHERITALRWESALKVFELL+EQ+WY+P S  Y+KLIVMLGKCKQPEKAH LFQA
Sbjct: 121  TVLEALHERITALRWESALKVFELLREQIWYRPYSGMYIKLIVMLGKCKQPEKAHELFQA 180

Query: 1320 MVDEGCVVNVESYTALLSAYSRSGHLHEAFYLLEEMKNTPNCHPDVFTYSILIKSCLQVY 1141
            M+ EGC V+ ESYTALLSAY RSG L +AF LLEEMK  P+C PDV TYSILIKSC+QV+
Sbjct: 181  MIHEGCDVSHESYTALLSAYGRSGLLDKAFSLLEEMKRNPDCQPDVHTYSILIKSCVQVF 240

Query: 1140 AFDKVQYLLSDMRSRGVKPNTITYNTLIDSYGKAKKFTQMESILVEMLNQQEVKPDVWTM 961
            AFDK + LLS+M S G+ PNTITYNTLID+YGKAK F +ME+ LV+ML+QQ  +PDVWTM
Sbjct: 241  AFDKAKTLLSNMESLGISPNTITYNTLIDAYGKAKMFEEMEATLVKMLSQQNCEPDVWTM 300

Query: 960  NSTLRAFGNSGQIEMMEKCYEKFQCAGIEPSIKTFNILLDSYGKTGNYEKMSAVMQYMEK 781
            NSTLRAFG SGQIE MEKCYEKFQ AGIEPSI TFN+LLDSYGK G+Y+KMSAVM+YM+K
Sbjct: 301  NSTLRAFGISGQIETMEKCYEKFQGAGIEPSIMTFNVLLDSYGKAGDYKKMSAVMEYMQK 360

Query: 780  YHFSWTLVTYNVVIDAFGRAGDLKQMEFLFRLMQSERIKPNCVTLCSIVRAYGKAGKAEK 601
            YH+SWT++TYN+VIDAFGRAGDLKQME+LFRLM+SERIKP+CVTLCS+VRAYG+A K EK
Sbjct: 361  YHYSWTIITYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAEKPEK 420

Query: 600  ITGVLRFVENSDVTLDTIFFNCLVDAFGMMGCVAEMKNVLELMERKGCKPDKITYRTMIK 421
            I GVLRF+ENSD+TLDT+FFNCLVDA+G MGC AEMK VL LME+KG +PDKITYRTMIK
Sbjct: 421  IEGVLRFIENSDITLDTVFFNCLVDAYGRMGCFAEMKGVLILMEQKGYRPDKITYRTMIK 480

Query: 420  AYSMSNMTSQVKEFKAVLAA 361
            AYS   MT  VKE + + AA
Sbjct: 481  AYSSKGMTKHVKELQDLEAA 500


>ref|NP_199684.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|223635750|sp|Q9FKC3.2|PP424_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g48730, chloroplastic; Flags: Precursor
            gi|332008334|gb|AED95717.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 508

 Score =  597 bits (1539), Expect = e-168
 Identities = 289/381 (75%), Positives = 334/381 (87%)
 Frame = -1

Query: 1500 TVLEALHERITALRWESALKVFELLQEQLWYKPNSANYVKLIVMLGKCKQPEKAHSLFQA 1321
            TVLE+LHERITALRWESA++VFELL+EQLWYKPN   YVKLIVMLGKCKQPEKAH LFQ 
Sbjct: 116  TVLESLHERITALRWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQE 175

Query: 1320 MVDEGCVVNVESYTALLSAYSRSGHLHEAFYLLEEMKNTPNCHPDVFTYSILIKSCLQVY 1141
            M++EGCVVN E YTAL+SAYSRSG    AF LLE MK++ NC PDV TYSILIKS LQV+
Sbjct: 176  MINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVF 235

Query: 1140 AFDKVQYLLSDMRSRGVKPNTITYNTLIDSYGKAKKFTQMESILVEMLNQQEVKPDVWTM 961
            AFDKVQ LLSDMR +G++PNTITYNTLID+YGKAK F +MES L++ML + + KPD WTM
Sbjct: 236  AFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTM 295

Query: 960  NSTLRAFGNSGQIEMMEKCYEKFQCAGIEPSIKTFNILLDSYGKTGNYEKMSAVMQYMEK 781
            NSTLRAFG +GQIEMME CYEKFQ +GIEP+I+TFNILLDSYGK+GNY+KMSAVM+YM+K
Sbjct: 296  NSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQK 355

Query: 780  YHFSWTLVTYNVVIDAFGRAGDLKQMEFLFRLMQSERIKPNCVTLCSIVRAYGKAGKAEK 601
            YH+SWT+VTYNVVIDAFGRAGDLKQME+LFRLMQSERI P+CVTLCS+VRAYG+A KA+K
Sbjct: 356  YHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADK 415

Query: 600  ITGVLRFVENSDVTLDTIFFNCLVDAFGMMGCVAEMKNVLELMERKGCKPDKITYRTMIK 421
            I GVLRF+ENSD+ LD +FFNCLVDA+G M   AEMK VLELME+KG KPDKITYRTM+K
Sbjct: 416  IGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVK 475

Query: 420  AYSMSNMTSQVKEFKAVLAAM 358
            AY +S MT+ VKE   V+ ++
Sbjct: 476  AYRISGMTTHVKELHGVVESV 496


>ref|XP_002303044.1| predicted protein [Populus trichocarpa] gi|222844770|gb|EEE82317.1|
            predicted protein [Populus trichocarpa]
          Length = 485

 Score =  586 bits (1511), Expect = e-165
 Identities = 284/384 (73%), Positives = 329/384 (85%)
 Frame = -1

Query: 1500 TVLEALHERITALRWESALKVFELLQEQLWYKPNSANYVKLIVMLGKCKQPEKAHSLFQA 1321
            TVLEALHERITALRW SAL+VFELL+EQLWY+P +  YVKLIVMLGKCKQP+KAH LFQA
Sbjct: 106  TVLEALHERITALRWASALEVFELLREQLWYRPYAGMYVKLIVMLGKCKQPDKAHQLFQA 165

Query: 1320 MVDEGCVVNVESYTALLSAYSRSGHLHEAFYLLEEMKNTPNCHPDVFTYSILIKSCLQVY 1141
            M+DEGC V  ESYTALLSAY RSG   +AF ++EEMKNTP+C PDV TYSILIKSCLQV+
Sbjct: 166  MIDEGCAVTHESYTALLSAYGRSGLFDKAFSIMEEMKNTPDCRPDVHTYSILIKSCLQVF 225

Query: 1140 AFDKVQYLLSDMRSRGVKPNTITYNTLIDSYGKAKKFTQMESILVEMLNQQEVKPDVWTM 961
            AFDKVQ LLSDM S G++PNT+T             F +ME+ L+EML+QQ+ +PDVWTM
Sbjct: 226  AFDKVQVLLSDMESLGIRPNTVT-------------FAEMEATLMEMLSQQDCEPDVWTM 272

Query: 960  NSTLRAFGNSGQIEMMEKCYEKFQCAGIEPSIKTFNILLDSYGKTGNYEKMSAVMQYMEK 781
            NST+RAFG SGQ+EMME CYEKFQ AGIEP+IKTFNILLDSYGK GNY+KMSAVM+YM++
Sbjct: 273  NSTIRAFGGSGQMEMMENCYEKFQSAGIEPNIKTFNILLDSYGKAGNYQKMSAVMEYMQR 332

Query: 780  YHFSWTLVTYNVVIDAFGRAGDLKQMEFLFRLMQSERIKPNCVTLCSIVRAYGKAGKAEK 601
            YH+SWT+VTYNVVIDAFGRAGDLKQME+LFRLM+SERIKP+CVTLCS+VRAY +AGK EK
Sbjct: 333  YHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYREAGKPEK 392

Query: 600  ITGVLRFVENSDVTLDTIFFNCLVDAFGMMGCVAEMKNVLELMERKGCKPDKITYRTMIK 421
            I  VLRF+ENSDVTLDT+FFNCLVDA+G + C AEMK VLELME KGCKPDK+TYRTMIK
Sbjct: 393  IGSVLRFIENSDVTLDTVFFNCLVDAYGRLECFAEMKEVLELMEEKGCKPDKVTYRTMIK 452

Query: 420  AYSMSNMTSQVKEFKAVLAAMERT 349
            AYS+  MTS  K+ + +L ++E T
Sbjct: 453  AYSIKGMTSHAKKLRNLLGSVEVT 476