BLASTX nr result

ID: Bupleurum21_contig00018163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018163
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264306.1| PREDICTED: gamma-secretase subunit APH1-like...   103   1e-20
ref|XP_002534115.1| gamma-secretase subunit aph-1, putative [Ric...   101   7e-20
gb|AFK35756.1| unknown [Lotus japonicus]                              100   1e-19
ref|XP_003572373.1| PREDICTED: gamma-secretase subunit APH1-like...   100   2e-19
ref|XP_002309813.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19

>ref|XP_002264306.1| PREDICTED: gamma-secretase subunit APH1-like [Vitis vinifera]
           gi|297743767|emb|CBI36650.3| unnamed protein product
           [Vitis vinifera]
          Length = 249

 Score =  103 bits (258), Expect = 1e-20
 Identities = 51/69 (73%), Positives = 58/69 (84%)
 Frame = -1

Query: 208 MTIAAGTGYVLIALGPALSLFTALISTKPFLILTLLSSTLVWLISLIMLSAVLRAFLPFK 29
           MT+ AG GY LIALGP+ SLF ++IS KPFLILT+LSSTL+WLISLI+LS V RAFLP K
Sbjct: 1   MTVTAGIGYALIALGPSFSLFVSVISKKPFLILTVLSSTLLWLISLIVLSGVWRAFLPLK 60

Query: 28  TTAWLPYFI 2
           TTAW PY I
Sbjct: 61  TTAWWPYAI 69


>ref|XP_002534115.1| gamma-secretase subunit aph-1, putative [Ricinus communis]
           gi|223525827|gb|EEF28266.1| gamma-secretase subunit
           aph-1, putative [Ricinus communis]
          Length = 249

 Score =  101 bits (251), Expect = 7e-20
 Identities = 49/67 (73%), Positives = 56/67 (83%)
 Frame = -1

Query: 208 MTIAAGTGYVLIALGPALSLFTALISTKPFLILTLLSSTLVWLISLIMLSAVLRAFLPFK 29
           MT+AAG GY L+ALGP+LSLF ++IS KPFLILTLLSSTL+WLISLI+LS V R FLP K
Sbjct: 1   MTVAAGIGYALLALGPSLSLFVSVISKKPFLILTLLSSTLLWLISLIVLSGVWRVFLPLK 60

Query: 28  TTAWLPY 8
           T  W PY
Sbjct: 61  TKTWWPY 67


>gb|AFK35756.1| unknown [Lotus japonicus]
          Length = 249

 Score =  100 bits (249), Expect = 1e-19
 Identities = 47/69 (68%), Positives = 58/69 (84%)
 Frame = -1

Query: 208 MTIAAGTGYVLIALGPALSLFTALISTKPFLILTLLSSTLVWLISLIMLSAVLRAFLPFK 29
           MT++AG GY L+ALGP+LS+F ++IS KPFLILT+LSSTL+WLISLI+LS + R FLP  
Sbjct: 1   MTVSAGIGYALVALGPSLSIFISVISKKPFLILTVLSSTLLWLISLIVLSGIWRGFLPLS 60

Query: 28  TTAWLPYFI 2
           TTAW PY I
Sbjct: 61  TTAWWPYAI 69


>ref|XP_003572373.1| PREDICTED: gamma-secretase subunit APH1-like [Brachypodium
           distachyon]
          Length = 249

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 47/69 (68%), Positives = 56/69 (81%)
 Frame = -1

Query: 208 MTIAAGTGYVLIALGPALSLFTALISTKPFLILTLLSSTLVWLISLIMLSAVLRAFLPFK 29
           MT+AAG GY LIALGPA SLFT +I+ KPFL+LTLLSSTL WLISLI++S + R FLP K
Sbjct: 1   MTVAAGVGYALIALGPAFSLFTGVIAKKPFLVLTLLSSTLFWLISLIVISGIWRGFLPVK 60

Query: 28  TTAWLPYFI 2
           + AW PY +
Sbjct: 61  SGAWWPYVL 69


>ref|XP_002309813.1| predicted protein [Populus trichocarpa] gi|222852716|gb|EEE90263.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 47/69 (68%), Positives = 59/69 (85%)
 Frame = -1

Query: 208 MTIAAGTGYVLIALGPALSLFTALISTKPFLILTLLSSTLVWLISLIMLSAVLRAFLPFK 29
           MT+AAG GY L+ALGP+LSLF ++IS KPFLILT+LSSTL+WL+SLI+L+ V RAFLP K
Sbjct: 1   MTVAAGIGYALLALGPSLSLFISVISKKPFLILTVLSSTLLWLMSLIVLAGVWRAFLPLK 60

Query: 28  TTAWLPYFI 2
           +T W P+ I
Sbjct: 61  STTWWPFAI 69


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