BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018139
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA16779.1| putative protein [Arabidopsis thaliana] gi|72690...   108   7e-22
ref|NP_001078426.1| ubiquitin carboxyl-terminal hydrolase-like p...   108   7e-22
emb|CAN83206.1| hypothetical protein VITISV_019937 [Vitis vinifera]   106   3e-21
ref|XP_003607389.1| U4/U6.U5 tri-snRNP-associated protein [Medic...   105   4e-21
ref|NP_001190799.1| U4/U6.U5 tri-snRNP-associated protein 2 [Ara...   102   4e-20

>emb|CAA16779.1| putative protein [Arabidopsis thaliana] gi|7269075|emb|CAB79184.1|
           putative protein [Arabidopsis thaliana]
          Length = 974

 Score =  108 bits (270), Expect = 7e-22
 Identities = 59/128 (46%), Positives = 75/128 (58%), Gaps = 2/128 (1%)
 Frame = -1

Query: 380 QKLLQQSSPSPPQVVFDNPLHRISXXXXXXXXXXXXXXXXTL--GNHVKNGAENENNGIH 207
           ++++++S   PP + F+NPL  ++                +   GN V  G  N N    
Sbjct: 452 KRVMERSDSPPPPLGFNNPLLPLANTYDDDDEEEENEQKKSQARGNGVAKGEGNGNKVKG 511

Query: 206 HXXXXXXXXXXXEVGVAQGQRSRMIELRRDCPYLDTVNRQVLDFDFERFCSVSLSNLNVY 27
                       +V   +G+ SR +E+RRDCPYLDTVNRQVLDFDFERFCSVSLSNLNVY
Sbjct: 512 EAQEEVDDDEDDDVSKGKGKHSRHVEVRRDCPYLDTVNRQVLDFDFERFCSVSLSNLNVY 571

Query: 26  ACLVCGKY 3
           ACLVCGKY
Sbjct: 572 ACLVCGKY 579


>ref|NP_001078426.1| ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis
           thaliana] gi|23397271|gb|AAN31917.1| unknown protein
           [Arabidopsis thaliana] gi|110741459|dbj|BAE98689.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332659187|gb|AEE84587.1| ubiquitin carboxyl-terminal
           hydrolase-like protein [Arabidopsis thaliana]
          Length = 541

 Score =  108 bits (270), Expect = 7e-22
 Identities = 59/128 (46%), Positives = 75/128 (58%), Gaps = 2/128 (1%)
 Frame = -1

Query: 380 QKLLQQSSPSPPQVVFDNPLHRISXXXXXXXXXXXXXXXXTL--GNHVKNGAENENNGIH 207
           ++++++S   PP + F+NPL  ++                +   GN V  G  N N    
Sbjct: 21  KRVMERSDSPPPPLGFNNPLLPLANTYDDDDEEEENEQKKSQARGNGVAKGEGNGNKVKG 80

Query: 206 HXXXXXXXXXXXEVGVAQGQRSRMIELRRDCPYLDTVNRQVLDFDFERFCSVSLSNLNVY 27
                       +V   +G+ SR +E+RRDCPYLDTVNRQVLDFDFERFCSVSLSNLNVY
Sbjct: 81  EAQEEVDDDEDDDVSKGKGKHSRHVEVRRDCPYLDTVNRQVLDFDFERFCSVSLSNLNVY 140

Query: 26  ACLVCGKY 3
           ACLVCGKY
Sbjct: 141 ACLVCGKY 148


>emb|CAN83206.1| hypothetical protein VITISV_019937 [Vitis vinifera]
          Length = 566

 Score =  106 bits (264), Expect = 3e-21
 Identities = 60/130 (46%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
 Frame = -1

Query: 380 QKLLQQSSPSPPQVVFDNPLHRISXXXXXXXXXXXXXXXXTLGNHVK-NGAENENNGIH- 207
           QK L +SSP P  + F+N LH ++                  G   + +    E NG   
Sbjct: 23  QKKLDESSPPPASLAFENALHTLASYDDDDDEKEEEEMKEASGLRGREDNRRAERNGHRD 82

Query: 206 --HXXXXXXXXXXXEVGVAQGQRSRMIELRRDCPYLDTVNRQVLDFDFERFCSVSLSNLN 33
                              Q +RSR++E+RRDCPYLDTVNRQVLDFDFE+FCSVSLSNLN
Sbjct: 83  GEEYDDDDDDDDDPHQEANQVKRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLN 142

Query: 32  VYACLVCGKY 3
           VYACLVCGKY
Sbjct: 143 VYACLVCGKY 152


>ref|XP_003607389.1| U4/U6.U5 tri-snRNP-associated protein [Medicago truncatula]
           gi|355508444|gb|AES89586.1| U4/U6.U5
           tri-snRNP-associated protein [Medicago truncatula]
          Length = 544

 Score =  105 bits (263), Expect = 4e-21
 Identities = 58/127 (45%), Positives = 72/127 (56%), Gaps = 1/127 (0%)
 Frame = -1

Query: 380 QKLLQQSSPSPPQVVFDNPLHRISXXXXXXXXXXXXXXXXTLGNHVKNGAENENNGI-HH 204
           Q++ + SSPSPP V   NPL  ++                      K   E++ NG  + 
Sbjct: 25  QRVDEDSSPSPPPVNIANPLSGLANNYADIDEEEDYYQRAKGAVSDKRNGESQQNGHKYE 84

Query: 203 XXXXXXXXXXXEVGVAQGQRSRMIELRRDCPYLDTVNRQVLDFDFERFCSVSLSNLNVYA 24
                         +  G+ SR +E+R+DCPYLDTVNRQVLDFDFE+FCSVSLSNLNVYA
Sbjct: 85  GDDDSDEEEDSNQQLFGGRSSRQVEVRKDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYA 144

Query: 23  CLVCGKY 3
           CLVCGKY
Sbjct: 145 CLVCGKY 151


>ref|NP_001190799.1| U4/U6.U5 tri-snRNP-associated protein 2 [Arabidopsis thaliana]
           gi|332659199|gb|AEE84599.1| U4/U6.U5
           tri-snRNP-associated protein 2 [Arabidopsis thaliana]
          Length = 539

 Score =  102 bits (255), Expect = 4e-20
 Identities = 58/128 (45%), Positives = 72/128 (56%), Gaps = 2/128 (1%)
 Frame = -1

Query: 380 QKLLQQSSPSPPQVVFDNPLHRISXXXXXXXXXXXXXXXXTLGNHVKNGAENENN--GIH 207
           ++++++S   PP + F+NPL   +                   N V  G  N N   G  
Sbjct: 21  KRVMERSDSPPPPLGFNNPLLPFANAYDDDNNQQNKSQTRC--NVVAKGEGNGNKVKGEA 78

Query: 206 HXXXXXXXXXXXEVGVAQGQRSRMIELRRDCPYLDTVNRQVLDFDFERFCSVSLSNLNVY 27
                       +    +G+ SR +E+RRDCPYLDTVNRQVLDFDFERFCSVSLSNLNVY
Sbjct: 79  QVEVDDDEDDDDDASKGRGKHSRHVEVRRDCPYLDTVNRQVLDFDFERFCSVSLSNLNVY 138

Query: 26  ACLVCGKY 3
           ACLVCGKY
Sbjct: 139 ACLVCGKY 146