BLASTX nr result

ID: Bupleurum21_contig00018131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018131
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA50609.1| ras-related GTP-binding protein [Nicotiana tabacum]    80   6e-22
ref|XP_002332129.1| predicted protein [Populus trichocarpa] gi|2...    79   6e-21
ref|NP_199326.1| Ras-related protein RHA1 [Arabidopsis thaliana]...    79   3e-20
ref|NP_001242153.1| uncharacterized protein LOC100791620 [Glycin...    72   3e-19
ref|XP_002321789.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-19

>emb|CAA50609.1| ras-related GTP-binding protein [Nicotiana tabacum]
          Length = 200

 Score = 80.1 bits (196), Expect(2) = 6e-22
 Identities = 39/42 (92%), Positives = 41/42 (97%)
 Frame = +2

Query: 2   RGAAAAIIVYDITNQASFDRAKKWVQELQSQGNSNMVMALAG 127
           RGAAAAIIV+DITNQASFDRAKKWVQELQ+QGN NMVMALAG
Sbjct: 81  RGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMALAG 122



 Score = 48.9 bits (115), Expect(2) = 6e-22
 Identities = 24/32 (75%), Positives = 25/32 (78%)
 Frame = +1

Query: 187 IFLEIAKRLPRLQPATKPSGMVLHDKPAGTAA 282
           IF EIA RLPRLQPA  PSGMVL D+PA T A
Sbjct: 163 IFYEIANRLPRLQPAQNPSGMVLMDRPAQTPA 194


>ref|XP_002332129.1| predicted protein [Populus trichocarpa] gi|222875179|gb|EEF12310.1|
           predicted protein [Populus trichocarpa]
          Length = 200

 Score = 78.6 bits (192), Expect(2) = 6e-21
 Identities = 38/42 (90%), Positives = 41/42 (97%)
 Frame = +2

Query: 2   RGAAAAIIVYDITNQASFDRAKKWVQELQSQGNSNMVMALAG 127
           RGAAAAIIVYDI+NQASF+RAKKWVQELQ+QGN NMVMALAG
Sbjct: 81  RGAAAAIIVYDISNQASFERAKKWVQELQAQGNPNMVMALAG 122



 Score = 47.0 bits (110), Expect(2) = 6e-21
 Identities = 22/32 (68%), Positives = 25/32 (78%)
 Frame = +1

Query: 187 IFLEIAKRLPRLQPATKPSGMVLHDKPAGTAA 282
           IF EIAKRLPR+QPA  PSGMVL D+P  + A
Sbjct: 163 IFYEIAKRLPRVQPAPNPSGMVLMDRPTESTA 194


>ref|NP_199326.1| Ras-related protein RHA1 [Arabidopsis thaliana]
           gi|297794787|ref|XP_002865278.1| hypothetical protein
           ARALYDRAFT_494466 [Arabidopsis lyrata subsp. lyrata]
           gi|400976|sp|P31582.1|RAF2A_ARATH RecName:
           Full=Ras-related protein RABF2a; Short=AtRABF2a;
           AltName: Full=Ras-related protein Rab5A; Short=AtRab5A;
           AltName: Full=Ras-related protein Rha1
           gi|14488100|gb|AAK63870.1|AF389298_1 AT5g45130/K17O22_15
           [Arabidopsis thaliana] gi|16484|emb|CAA41863.1| RHA1
           [Arabidopsis thaliana] gi|397594|emb|CAA80534.1|
           GTP-binding protein [Arabidopsis thaliana]
           gi|9758988|dbj|BAB09498.1| ras-related GTP-binding
           protein RHA1 [Arabidopsis thaliana]
           gi|20453279|gb|AAM19878.1| AT5g45130/K17O22_15
           [Arabidopsis thaliana] gi|297311113|gb|EFH41537.1|
           hypothetical protein ARALYDRAFT_494466 [Arabidopsis
           lyrata subsp. lyrata] gi|332007825|gb|AED95208.1|
           Ras-related protein RHA1 [Arabidopsis thaliana]
          Length = 200

 Score = 78.6 bits (192), Expect(2) = 3e-20
 Identities = 38/42 (90%), Positives = 41/42 (97%)
 Frame = +2

Query: 2   RGAAAAIIVYDITNQASFDRAKKWVQELQSQGNSNMVMALAG 127
           RGAAAAIIV+DITNQASF+RAKKWVQELQ+QGN NMVMALAG
Sbjct: 81  RGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMALAG 122



 Score = 44.7 bits (104), Expect(2) = 3e-20
 Identities = 21/31 (67%), Positives = 24/31 (77%)
 Frame = +1

Query: 187 IFLEIAKRLPRLQPATKPSGMVLHDKPAGTA 279
           IF EIAKRLPR+QPA  P+GMVL + P  TA
Sbjct: 163 IFYEIAKRLPRVQPAENPTGMVLPNGPGATA 193


>ref|NP_001242153.1| uncharacterized protein LOC100791620 [Glycine max]
           gi|255642884|gb|ACU22609.1| unknown [Glycine max]
          Length = 200

 Score = 72.4 bits (176), Expect(2) = 3e-19
 Identities = 36/42 (85%), Positives = 37/42 (88%)
 Frame = +2

Query: 2   RGAAAAIIVYDITNQASFDRAKKWVQELQSQGNSNMVMALAG 127
           RGAAAAIIVYDIT+  SF RAKKWVQELQ QGN NMVMALAG
Sbjct: 81  RGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMALAG 122



 Score = 47.4 bits (111), Expect(2) = 3e-19
 Identities = 22/29 (75%), Positives = 24/29 (82%)
 Frame = +1

Query: 187 IFLEIAKRLPRLQPATKPSGMVLHDKPAG 273
           IF EIAKRLPR QPA  P+GMVL D+PAG
Sbjct: 163 IFYEIAKRLPRAQPAQNPAGMVLVDRPAG 191


>ref|XP_002321789.1| predicted protein [Populus trichocarpa] gi|222868785|gb|EEF05916.1|
           predicted protein [Populus trichocarpa]
          Length = 200

 Score = 78.6 bits (192), Expect(2) = 4e-19
 Identities = 38/42 (90%), Positives = 41/42 (97%)
 Frame = +2

Query: 2   RGAAAAIIVYDITNQASFDRAKKWVQELQSQGNSNMVMALAG 127
           RGAAAAIIVYDI+NQASF+RAKKWVQELQ+QGN NMVMALAG
Sbjct: 81  RGAAAAIIVYDISNQASFERAKKWVQELQAQGNPNMVMALAG 122



 Score = 40.8 bits (94), Expect(2) = 4e-19
 Identities = 19/32 (59%), Positives = 23/32 (71%)
 Frame = +1

Query: 187 IFLEIAKRLPRLQPATKPSGMVLHDKPAGTAA 282
           IF EIAKRL ++QPA  PSGMV+ D+P    A
Sbjct: 163 IFYEIAKRLSQVQPAPNPSGMVIMDRPTERTA 194


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