BLASTX nr result

ID: Bupleurum21_contig00018114 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018114
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267713.2| PREDICTED: uncharacterized protein LOC100258...   108   4e-22
ref|XP_002311854.1| predicted protein [Populus trichocarpa] gi|2...    88   6e-16
ref|XP_002520203.1| conserved hypothetical protein [Ricinus comm...    84   2e-14
ref|XP_002311790.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-13
ref|XP_003517869.1| PREDICTED: uncharacterized protein LOC100810...    79   4e-13

>ref|XP_002267713.2| PREDICTED: uncharacterized protein LOC100258808 [Vitis vinifera]
           gi|296086485|emb|CBI32074.3| unnamed protein product
           [Vitis vinifera]
          Length = 513

 Score =  108 bits (270), Expect = 4e-22
 Identities = 66/157 (42%), Positives = 94/157 (59%), Gaps = 11/157 (7%)
 Frame = -1

Query: 456 LSKAVSTSAPRLSRPAPASTSRLSNPISTSIVRPVSHSSTRKPNV----LPSQKSKDSSA 289
           ++K+   S PR S+P P S    S+  S       S    + P+      PS +SK  SA
Sbjct: 258 IAKSPQISKPRDSKPTPTSKMISSSQPSIKKANGSSLPKNKNPSAGEIKKPSPRSKIPSA 317

Query: 288 TTIKLAAPTSLHKSV-------DSVSITTNKKSLIMEQMGDKEIVKRAFKSFQSNLNQLQ 130
              K  APTSLHKS+       DS S+TT +KSLIME+MGDK+IV+RAFK+FQ++ NQL+
Sbjct: 318 GEWKKVAPTSLHKSLSLGPPHSDSASLTTTRKSLIMEKMGDKDIVRRAFKTFQNSFNQLK 377

Query: 129 PSRVDKPHGPRPVSARGSEHQVSGFVTSQKENDRTRK 19
           PS   +   P+ VSA+ +E +VS  +T+Q++ +R  K
Sbjct: 378 PSSEVRSSVPKQVSAKSTEPRVSTSITTQRDKERPLK 414


>ref|XP_002311854.1| predicted protein [Populus trichocarpa] gi|222851674|gb|EEE89221.1|
           predicted protein [Populus trichocarpa]
          Length = 566

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 55/148 (37%), Positives = 84/148 (56%), Gaps = 7/148 (4%)
 Frame = -1

Query: 456 LSKAVSTSAPRLSRPAPASTSRLSNPISTSIVRPVSHSSTRKPNVLPSQKSKDSSATTIK 277
           L+ A     P +++    S+ + S P STS     S SS +K N     +SK++     K
Sbjct: 292 LAMAKKKPEPPITKRPQISSLKFSKPASTSSSLSASQSSIKKVNGSSLPRSKNTPVGGNK 351

Query: 276 LAAPTSLHKSV-------DSVSITTNKKSLIMEQMGDKEIVKRAFKSFQSNLNQLQPSRV 118
              P SLH S+       ++V +TT +KS IME+MGDK+IVKRAFK+FQ+N +QL+ S  
Sbjct: 352 KVNPKSLHMSLSMDSPNSETVPLTTTRKSFIMEKMGDKDIVKRAFKTFQNNFSQLKSSAE 411

Query: 117 DKPHGPRPVSARGSEHQVSGFVTSQKEN 34
           ++  G + + A+    +VS  +T +KEN
Sbjct: 412 ERSIGAKQMPAKEIGVKVSTSMTPRKEN 439


>ref|XP_002520203.1| conserved hypothetical protein [Ricinus communis]
           gi|223540695|gb|EEF42258.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 556

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 55/145 (37%), Positives = 77/145 (53%), Gaps = 12/145 (8%)
 Frame = -1

Query: 432 APRLSRPAPASTSRLSNPISTSIVRPVSHSSTRKPNVLPSQKSKDSSATTIKLAAPTSLH 253
           A  +++    ST +++    TS V     SST+K  V    KSK  S       AP SLH
Sbjct: 267 ASPVAKSTQLSTPKVTKTGPTSGVLSTPQSSTKKATVSSLPKSKSPSVAGNNKVAPKSLH 326

Query: 252 KSVD------------SVSITTNKKSLIMEQMGDKEIVKRAFKSFQSNLNQLQPSRVDKP 109
            S+             +   TT +KS IME+M DKEIVKRAFK+FQ+N NQL+ S  ++ 
Sbjct: 327 MSLSMDTPNSDPAPLAAAPTTTARKSFIMEKMKDKEIVKRAFKTFQNNYNQLKSSADERS 386

Query: 108 HGPRPVSARGSEHQVSGFVTSQKEN 34
              + V  +G+E +VS  +T +KEN
Sbjct: 387 LVAKQVPTKGTEVKVSSSMTPRKEN 411


>ref|XP_002311790.1| predicted protein [Populus trichocarpa] gi|222851610|gb|EEE89157.1|
           predicted protein [Populus trichocarpa]
          Length = 513

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 7/148 (4%)
 Frame = -1

Query: 456 LSKAVSTSAPRLSRPAPASTSRLSNPISTSIVRPVSHSSTRKPNVLPSQKSKDSSATTIK 277
           +++A     P +++    ST ++S  + TS     S SST+K N     +SK+  A   K
Sbjct: 258 IARAKKKPEPLVTKQPQISTPKVSKRVPTSSSLSASQSSTKKMNGSLLPRSKNPPAGENK 317

Query: 276 LAAPTSLHKSV-------DSVSITTNKKSLIMEQMGDKEIVKRAFKSFQSNLNQLQPSRV 118
                SLH S+       +   + T +KS I E+MGDK+IVKRAFK+FQ+N +QL+ S  
Sbjct: 318 KVTSKSLHLSLTMDPSNSEPDPLITTRKSFIREKMGDKDIVKRAFKTFQNNFSQLKSSAE 377

Query: 117 DKPHGPRPVSARGSEHQVSGFVTSQKEN 34
           ++    + V A+G++ +VS  +T + EN
Sbjct: 378 ERAIREKQVPAKGTDVKVSTSMTPRTEN 405


>ref|XP_003517869.1| PREDICTED: uncharacterized protein LOC100810690 [Glycine max]
          Length = 490

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 54/143 (37%), Positives = 81/143 (56%), Gaps = 8/143 (5%)
 Frame = -1

Query: 420 SRPAPASTSRLSNPISTSIVRPVSH-SSTRKPNVLPSQKSKDSSATTIKLAAPTSLHKSV 244
           S+ +P ST + S P ST+  + V+  SSTRK +     + + +S+   +  A   LH S+
Sbjct: 257 SKASPISTPKSSKPASTTPTKTVTPASSTRKGSSPSLTRRQITSSGESRKFANKPLHMSL 316

Query: 243 -------DSVSITTNKKSLIMEQMGDKEIVKRAFKSFQSNLNQLQPSRVDKPHGPRPVSA 85
                  D    +T ++SLIME MGDK+IVKRAFK+FQ++ NQ + S  DK    + V +
Sbjct: 317 SLAPSNPDPAPQSTMRRSLIMENMGDKDIVKRAFKTFQNSFNQPKTSVEDKSLIKKQVPS 376

Query: 84  RGSEHQVSGFVTSQKENDRTRKI 16
           RG+  +V    T +KEN R  K+
Sbjct: 377 RGTVSKVPTSTTLRKENGRPTKV 399


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