BLASTX nr result

ID: Bupleurum21_contig00018112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018112
         (1142 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65915.1| hypothetical protein VITISV_000065 [Vitis vinifera]   476   e-132
gb|AFG17072.1| GID1A [Vitis vinifera]                                 475   e-132
emb|CBI34320.3| unnamed protein product [Vitis vinifera]              475   e-132
ref|XP_002265764.1| PREDICTED: gibberellin receptor GID1C-like [...   475   e-132
ref|XP_002512310.1| Gibberellin receptor GID1, putative [Ricinus...   473   e-131

>emb|CAN65915.1| hypothetical protein VITISV_000065 [Vitis vinifera]
          Length = 344

 Score =  476 bits (1226), Expect = e-132
 Identities = 227/297 (76%), Positives = 251/297 (84%), Gaps = 1/297 (0%)
 Frame = +3

Query: 3   FLDRKVPANTNPVNGVFSFDVIIDRQTNLLSRIYRPTDASEVPPSFADLQKPLSYDIVPV 182
           FLDRKVPAN NPV GVFSFDVIIDR T+LLSRIYRP    E  PS  +L+KP++ DIVPV
Sbjct: 48  FLDRKVPANANPVEGVFSFDVIIDRSTSLLSRIYRPATGEEALPSIMELEKPVTGDIVPV 107

Query: 183 IIFXXXXXXXXXXXXXXIYDSLCRRLVGLCNAVVISVNYRRAPEDPYPCAYDDGWTALKW 362
           I+F              IYD+LCRRLVG+C AVV+SVNYRRAPE+PYPCAYDDGW ALKW
Sbjct: 108 ILFFHGGSFAHSSANSAIYDTLCRRLVGICKAVVVSVNYRRAPENPYPCAYDDGWAALKW 167

Query: 363 VSSKTWLQSR-DSKVHIFLAGDSSGGNIAHNVALKAAESGIEVFGNILLNPMFGGEERTE 539
           V+S+ WL+S  DSKVHI++ GDSSGGNI HNVALKA ESGIEV GNILLNPMFGG+ERTE
Sbjct: 168 VNSRPWLKSEEDSKVHIYMVGDSSGGNIVHNVALKAVESGIEVLGNILLNPMFGGQERTE 227

Query: 540 SEKRLDGIYFVTVRDRDWYWRAFLPEGEDRDHPACNPFGPKATSIEGMKFPKSLVVIAGL 719
           SEKRLDG YFVT++DRDWYWRAFLPEGEDRDH ACNPFGP   S+ GMKFPKSLVV+AGL
Sbjct: 228 SEKRLDGKYFVTIQDRDWYWRAFLPEGEDRDHAACNPFGPNGKSLVGMKFPKSLVVVAGL 287

Query: 720 DLVHDWQLAYAEGLKKAGQEVKVLFLEKATIGFYLLPNNDHFYTVMDEIKSFVCSDC 890
           DLV DWQLAY EGLKKAGQEVK L+L+KATIGFYLLPNNDHFYTVMDEI +FV S+C
Sbjct: 288 DLVQDWQLAYVEGLKKAGQEVKHLYLDKATIGFYLLPNNDHFYTVMDEISNFVSSNC 344


>gb|AFG17072.1| GID1A [Vitis vinifera]
          Length = 344

 Score =  475 bits (1223), Expect = e-132
 Identities = 226/297 (76%), Positives = 251/297 (84%), Gaps = 1/297 (0%)
 Frame = +3

Query: 3   FLDRKVPANTNPVNGVFSFDVIIDRQTNLLSRIYRPTDASEVPPSFADLQKPLSYDIVPV 182
           FLDRKVPAN NPV GVFSFDVIIDR T+LLSRIYRP    E  PS  +L+KP++ DIVPV
Sbjct: 48  FLDRKVPANANPVEGVFSFDVIIDRSTSLLSRIYRPATGEEALPSIMELEKPVTGDIVPV 107

Query: 183 IIFXXXXXXXXXXXXXXIYDSLCRRLVGLCNAVVISVNYRRAPEDPYPCAYDDGWTALKW 362
           I+F              IYD+LCRRLVG+C AVV+SVNYRRAPE+PYPCAYDDGW ALKW
Sbjct: 108 ILFFHGGSFAHSSANSAIYDTLCRRLVGICKAVVVSVNYRRAPENPYPCAYDDGWAALKW 167

Query: 363 VSSKTWLQSR-DSKVHIFLAGDSSGGNIAHNVALKAAESGIEVFGNILLNPMFGGEERTE 539
           V+S+ WL+S  DSKVHI++ GDSSGGNI HNVALKA ESGIEV GNILLNPMFGG+ERTE
Sbjct: 168 VNSRPWLKSEEDSKVHIYMVGDSSGGNIVHNVALKAVESGIEVLGNILLNPMFGGQERTE 227

Query: 540 SEKRLDGIYFVTVRDRDWYWRAFLPEGEDRDHPACNPFGPKATSIEGMKFPKSLVVIAGL 719
           SEKRLDG YFVT++DRDWYWRAFLPEGEDRDH ACNPFGP   S+ GMKFPKSLVV+AGL
Sbjct: 228 SEKRLDGKYFVTIQDRDWYWRAFLPEGEDRDHAACNPFGPNGKSLVGMKFPKSLVVVAGL 287

Query: 720 DLVHDWQLAYAEGLKKAGQEVKVLFLEKATIGFYLLPNNDHFYTVMDEIKSFVCSDC 890
           DLV DWQLAY EGLKKAGQEV+ L+L+KATIGFYLLPNNDHFYTVMDEI +FV S+C
Sbjct: 288 DLVQDWQLAYVEGLKKAGQEVRHLYLDKATIGFYLLPNNDHFYTVMDEISNFVSSNC 344


>emb|CBI34320.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score =  475 bits (1223), Expect = e-132
 Identities = 228/302 (75%), Positives = 253/302 (83%), Gaps = 1/302 (0%)
 Frame = +3

Query: 3   FLDRKVPANTNPVNGVFSFDVIIDRQTNLLSRIYRPTDASEVPPSFADLQKPLSYDIVPV 182
           FLDRKVPAN NPV GVFSFDVIIDR T+LLSRIYRP    E  PS  +L+KP++ DIVPV
Sbjct: 48  FLDRKVPANANPVEGVFSFDVIIDRSTSLLSRIYRPATGEEALPSIMELEKPVTGDIVPV 107

Query: 183 IIFXXXXXXXXXXXXXXIYDSLCRRLVGLCNAVVISVNYRRAPEDPYPCAYDDGWTALKW 362
           I+F              IYD+LCRRLVG+C AVV+SVNYRRAPE+PYPCAYDDGW ALKW
Sbjct: 108 ILFFHGGSFAHSSANSAIYDTLCRRLVGICKAVVVSVNYRRAPENPYPCAYDDGWAALKW 167

Query: 363 VSSKTWLQSR-DSKVHIFLAGDSSGGNIAHNVALKAAESGIEVFGNILLNPMFGGEERTE 539
           V+S+ WL+S  DSKVHI++ GDSSGGNI HNVALKA ESGIEV GNILLNPMFGG+ERTE
Sbjct: 168 VNSRPWLKSEEDSKVHIYMVGDSSGGNIVHNVALKAVESGIEVLGNILLNPMFGGQERTE 227

Query: 540 SEKRLDGIYFVTVRDRDWYWRAFLPEGEDRDHPACNPFGPKATSIEGMKFPKSLVVIAGL 719
           SEKRLDG YFVT++DRDWYWRAFLPEGEDRDH ACNPFGP   S+ GMKFPKSLVV+AGL
Sbjct: 228 SEKRLDGKYFVTIQDRDWYWRAFLPEGEDRDHAACNPFGPNGKSLVGMKFPKSLVVVAGL 287

Query: 720 DLVHDWQLAYAEGLKKAGQEVKVLFLEKATIGFYLLPNNDHFYTVMDEIKSFVCSDCSLE 899
           DLV DWQLAY EGLKKAGQEVK L+L+KATIGFYLLPNNDHFYTVMDEI +F+    SLE
Sbjct: 288 DLVQDWQLAYVEGLKKAGQEVKHLYLDKATIGFYLLPNNDHFYTVMDEISNFMLKMISLE 347

Query: 900 QL 905
           +L
Sbjct: 348 RL 349


>ref|XP_002265764.1| PREDICTED: gibberellin receptor GID1C-like [Vitis vinifera]
          Length = 360

 Score =  475 bits (1223), Expect = e-132
 Identities = 228/302 (75%), Positives = 253/302 (83%), Gaps = 1/302 (0%)
 Frame = +3

Query: 3   FLDRKVPANTNPVNGVFSFDVIIDRQTNLLSRIYRPTDASEVPPSFADLQKPLSYDIVPV 182
           FLDRKVPAN NPV GVFSFDVIIDR T+LLSRIYRP    E  PS  +L+KP++ DIVPV
Sbjct: 48  FLDRKVPANANPVEGVFSFDVIIDRSTSLLSRIYRPATGEEALPSIMELEKPVTGDIVPV 107

Query: 183 IIFXXXXXXXXXXXXXXIYDSLCRRLVGLCNAVVISVNYRRAPEDPYPCAYDDGWTALKW 362
           I+F              IYD+LCRRLVG+C AVV+SVNYRRAPE+PYPCAYDDGW ALKW
Sbjct: 108 ILFFHGGSFAHSSANSAIYDTLCRRLVGICKAVVVSVNYRRAPENPYPCAYDDGWAALKW 167

Query: 363 VSSKTWLQSR-DSKVHIFLAGDSSGGNIAHNVALKAAESGIEVFGNILLNPMFGGEERTE 539
           V+S+ WL+S  DSKVHI++ GDSSGGNI HNVALKA ESGIEV GNILLNPMFGG+ERTE
Sbjct: 168 VNSRPWLKSEEDSKVHIYMVGDSSGGNIVHNVALKAVESGIEVLGNILLNPMFGGQERTE 227

Query: 540 SEKRLDGIYFVTVRDRDWYWRAFLPEGEDRDHPACNPFGPKATSIEGMKFPKSLVVIAGL 719
           SEKRLDG YFVT++DRDWYWRAFLPEGEDRDH ACNPFGP   S+ GMKFPKSLVV+AGL
Sbjct: 228 SEKRLDGKYFVTIQDRDWYWRAFLPEGEDRDHAACNPFGPNGKSLVGMKFPKSLVVVAGL 287

Query: 720 DLVHDWQLAYAEGLKKAGQEVKVLFLEKATIGFYLLPNNDHFYTVMDEIKSFVCSDCSLE 899
           DLV DWQLAY EGLKKAGQEVK L+L+KATIGFYLLPNNDHFYTVMDEI +F+    SLE
Sbjct: 288 DLVQDWQLAYVEGLKKAGQEVKHLYLDKATIGFYLLPNNDHFYTVMDEISNFMLKMISLE 347

Query: 900 QL 905
           +L
Sbjct: 348 RL 349


>ref|XP_002512310.1| Gibberellin receptor GID1, putative [Ricinus communis]
           gi|223548271|gb|EEF49762.1| Gibberellin receptor GID1,
           putative [Ricinus communis]
          Length = 344

 Score =  473 bits (1216), Expect = e-131
 Identities = 220/297 (74%), Positives = 257/297 (86%), Gaps = 1/297 (0%)
 Frame = +3

Query: 3   FLDRKVPANTNPVNGVFSFDVIIDRQTNLLSRIYRPTDASEVPPSFADLQKPLSYDIVPV 182
           FLDRKVP N NPV+GVFSFDV+IDR T+LLSRIYRP +  ++ P+ A+L+KP++ D+VPV
Sbjct: 48  FLDRKVPPNANPVDGVFSFDVVIDRGTSLLSRIYRPAEGEQLQPNIAELEKPVTSDVVPV 107

Query: 183 IIFXXXXXXXXXXXXXXIYDSLCRRLVGLCNAVVISVNYRRAPEDPYPCAYDDGWTALKW 362
           I+F              IYD+LCRRLVG+C AVV+SVNYRRAPE+ YPCAYDDGWTALKW
Sbjct: 108 ILFFHGGSFAHSSANSAIYDTLCRRLVGICRAVVVSVNYRRAPENRYPCAYDDGWTALKW 167

Query: 363 VSSKTWLQSR-DSKVHIFLAGDSSGGNIAHNVALKAAESGIEVFGNILLNPMFGGEERTE 539
           V+S+TWL+S+ D+KVH++LAGDSSGGNI H+VAL+A ESGIEV GNILLNPMFGG+ERTE
Sbjct: 168 VNSRTWLESKKDAKVHMYLAGDSSGGNIVHHVALRALESGIEVLGNILLNPMFGGQERTE 227

Query: 540 SEKRLDGIYFVTVRDRDWYWRAFLPEGEDRDHPACNPFGPKATSIEGMKFPKSLVVIAGL 719
           SEKRLDG YFVTV+DRDWYWRAFLPE  DRDHPACNPFGPK  S+EGMKFPKSLVV+AGL
Sbjct: 228 SEKRLDGKYFVTVQDRDWYWRAFLPEEADRDHPACNPFGPKGRSLEGMKFPKSLVVVAGL 287

Query: 720 DLVHDWQLAYAEGLKKAGQEVKVLFLEKATIGFYLLPNNDHFYTVMDEIKSFVCSDC 890
           DL+ DWQLAY EGLKKAGQ VK+L+LE+ATIGFYLLPNN+HF+TVMDEI  FVC +C
Sbjct: 288 DLIQDWQLAYVEGLKKAGQVVKLLYLEQATIGFYLLPNNNHFHTVMDEISEFVCPNC 344


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