BLASTX nr result

ID: Bupleurum21_contig00018105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018105
         (938 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281443.1| PREDICTED: uncharacterized membrane protein ...   110   4e-22
emb|CBI32505.3| unnamed protein product [Vitis vinifera]              108   2e-21
ref|XP_002522369.1| conserved hypothetical protein [Ricinus comm...   104   3e-20
ref|XP_002310174.1| predicted protein [Populus trichocarpa] gi|2...   103   6e-20
gb|AFK34518.1| unknown [Medicago truncatula]                           69   1e-09

>ref|XP_002281443.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Vitis
           vinifera]
          Length = 547

 Score =  110 bits (276), Expect = 4e-22
 Identities = 48/68 (70%), Positives = 55/68 (80%)
 Frame = +3

Query: 516 MINQSTFLTYFCYCIFFPPIFSFLFVLGIIKGAIFSPFVFLVIAFGDAGVVVGLWPLHLF 695
           M++   FLTY CY IFF P+F  LF LGIIKG IFSPFVFLVIAFGD GVVVGLWP HL 
Sbjct: 1   MVDSKGFLTYLCYFIFFLPVFVLLFALGIIKGGIFSPFVFLVIAFGDIGVVVGLWPCHLV 60

Query: 696 WSIYCLIR 719
           W++YC++R
Sbjct: 61  WTVYCIVR 68


>emb|CBI32505.3| unnamed protein product [Vitis vinifera]
          Length = 1019

 Score =  108 bits (270), Expect = 2e-21
 Identities = 48/68 (70%), Positives = 54/68 (79%)
 Frame = +3

Query: 516 MINQSTFLTYFCYCIFFPPIFSFLFVLGIIKGAIFSPFVFLVIAFGDAGVVVGLWPLHLF 695
           M++   FLTY CY IFF P+F  LF LGIIKG IFSPFVFLVIAFGD GVVVGLWP HL 
Sbjct: 1   MVDSKGFLTYLCYFIFFLPVFVLLFALGIIKGGIFSPFVFLVIAFGDIGVVVGLWPCHLV 60

Query: 696 WSIYCLIR 719
           W++YC+ R
Sbjct: 61  WTVYCINR 68


>ref|XP_002522369.1| conserved hypothetical protein [Ricinus communis]
           gi|223538447|gb|EEF40053.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 550

 Score =  104 bits (259), Expect = 3e-20
 Identities = 46/62 (74%), Positives = 52/62 (83%)
 Frame = +3

Query: 534 FLTYFCYCIFFPPIFSFLFVLGIIKGAIFSPFVFLVIAFGDAGVVVGLWPLHLFWSIYCL 713
           FL+Y CY +FF P+   LF+L IIKGAIFSPFV LVIAFGD GVV+GLWPLHL WSIYCL
Sbjct: 7   FLSYLCYFLFFLPVCVLLFILAIIKGAIFSPFVLLVIAFGDTGVVIGLWPLHLVWSIYCL 66

Query: 714 IR 719
           I+
Sbjct: 67  IK 68


>ref|XP_002310174.1| predicted protein [Populus trichocarpa] gi|222853077|gb|EEE90624.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  103 bits (257), Expect = 6e-20
 Identities = 46/62 (74%), Positives = 51/62 (82%)
 Frame = +3

Query: 534 FLTYFCYCIFFPPIFSFLFVLGIIKGAIFSPFVFLVIAFGDAGVVVGLWPLHLFWSIYCL 713
           FL Y  Y I F PIF FLF LG IKGAIFSPFVFLVIAFGD G+V+GLWPLHL WS+YC+
Sbjct: 7   FLNYLLYSIIFFPIFLFLFFLGCIKGAIFSPFVFLVIAFGDTGIVIGLWPLHLIWSMYCI 66

Query: 714 IR 719
           I+
Sbjct: 67  IK 68


>gb|AFK34518.1| unknown [Medicago truncatula]
          Length = 582

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 29/66 (43%), Positives = 42/66 (63%)
 Frame = +3

Query: 558 IFFPPIFSFLFVLGIIKGAIFSPFVFLVIAFGDAGVVVGLWPLHLFWSIYCLIRLHLINL 737
           I F P F  L +LGIIKG I  P   L+I+ G+ G+++GLWP+H+ WS YC++R   +  
Sbjct: 15  ILFLPFFIGLLLLGIIKGVIICPLACLIISIGNFGIIIGLWPVHVIWSYYCVLRAKQLGP 74

Query: 738 SFSSFI 755
           S  + I
Sbjct: 75  SLKAVI 80


Top