BLASTX nr result

ID: Bupleurum21_contig00018101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018101
         (1102 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308859.1| predicted protein [Populus trichocarpa] gi|2...   333   3e-89
ref|XP_002278511.1| PREDICTED: protein sym-1 [Vitis vinifera] gi...   325   1e-86
ref|XP_002323213.1| predicted protein [Populus trichocarpa] gi|2...   297   4e-78
ref|XP_003554094.1| PREDICTED: protein sym-1-like [Glycine max]       286   6e-75
ref|XP_004136622.1| PREDICTED: protein SYM1-like [Cucumis sativus]    271   2e-70

>ref|XP_002308859.1| predicted protein [Populus trichocarpa] gi|222854835|gb|EEE92382.1|
            predicted protein [Populus trichocarpa]
          Length = 286

 Score =  333 bits (855), Expect = 3e-89
 Identities = 174/293 (59%), Positives = 207/293 (70%), Gaps = 7/293 (2%)
 Frame = -2

Query: 1068 MILNPVILNCKSPDLIRFMGVLPKPSSHIASQTQITANLFQISAFRSSSFSNYEAPFGLS 889
            M+ NPV    K+  L RF+G  PKP+ H + +TQ++ N  QI+ FR+S F +        
Sbjct: 1    MVQNPVCFTRKASLLYRFVGFSPKPTPHFSLRTQLSLNPAQITGFRASVFKDM------- 53

Query: 888  LSGRSKIGLRQKGCDWFRVSAVTXXXXXXXXXXXXXXXXXXXXXXXXG-------EKKWS 730
              G SKIG RQ   D FRV AV+                                 + WS
Sbjct: 54   --GGSKIGFRQLDFDQFRVLAVSGGGSGGSGRLGGSSGGGGGQGGAASGGSGSGGNRNWS 111

Query: 729  LISWYLALLEKHPVLTKAVTSAFLTLIGDLICQFLIDQVTSVDLKRTFLFTFLGVALVGP 550
             +SWYL LL K+PVLTKAVTSA LTL+GDLICQ +IDQ  S+DLKRTF+FTFLG+ LVGP
Sbjct: 112  FLSWYLNLLAKYPVLTKAVTSAILTLMGDLICQLVIDQAPSLDLKRTFVFTFLGLVLVGP 171

Query: 549  TLHFWYLYLSKLVTTPGASGAFLRLVIDQFLFAPTFVAVFLSTLLTLEGRSSLVMPKLQQ 370
            TLHFWYLYLSKLVT PGASGAFLRL++DQF+F+P F+ VFLSTL+TLEGR S V+PKLQQ
Sbjct: 172  TLHFWYLYLSKLVTLPGASGAFLRLLVDQFVFSPIFIGVFLSTLVTLEGRPSEVLPKLQQ 231

Query: 369  EWFSSVVANWKLWIPFQFLNFLFVPQQFQVLAANFIALVWNVVLSYKAHKAVI 211
            EWFS+V+ANW+LWIPFQFLNF FVPQQFQVLAAN IALVWNV+LS+KAHK V+
Sbjct: 232  EWFSAVLANWQLWIPFQFLNFRFVPQQFQVLAANVIALVWNVILSFKAHKEVL 284


>ref|XP_002278511.1| PREDICTED: protein sym-1 [Vitis vinifera]
            gi|297741716|emb|CBI32848.3| unnamed protein product
            [Vitis vinifera]
          Length = 293

 Score =  325 bits (833), Expect = 1e-86
 Identities = 174/295 (58%), Positives = 209/295 (70%), Gaps = 9/295 (3%)
 Frame = -2

Query: 1068 MILNPVILNCKSPDLIRFMGVLPKPSSHIASQTQITANLFQISAFRSSSFSNYEA-PFGL 892
            M  NP+ L   SP L RF+G     S +    ++I  N  +IS  RS S  ++   P   
Sbjct: 1    MAPNPITLTRMSPLLFRFLGF----SRNTIYSSRIPTNPIRISTVRSYSTCHFFCYPSHS 56

Query: 891  SLS------GRSKIGLRQKGCDWFRVSAVTXXXXXXXXXXXXXXXXXXXXXXXXGEK--K 736
            S+       GRS+IG  +KG D+FR+SAV+                              
Sbjct: 57   SVRTVFKDLGRSEIGFSKKGSDYFRISAVSDGGSGGTGGFGGFGDGNSGGKSEGSGGGGD 116

Query: 735  WSLISWYLALLEKHPVLTKAVTSAFLTLIGDLICQFLIDQVTSVDLKRTFLFTFLGVALV 556
            WSL+SWYLALLEK+PVLTKA+TSAFLTL+GDLICQ +IDQV S+DLKRTFLFT LG+ LV
Sbjct: 117  WSLLSWYLALLEKYPVLTKAITSAFLTLVGDLICQLVIDQVPSLDLKRTFLFTLLGLVLV 176

Query: 555  GPTLHFWYLYLSKLVTTPGASGAFLRLVIDQFLFAPTFVAVFLSTLLTLEGRSSLVMPKL 376
            GPTLHFWYLYLSKLVT PGASGAFLRL++DQFLF+P F+ VFLSTL+TLEGR S V+PKL
Sbjct: 177  GPTLHFWYLYLSKLVTIPGASGAFLRLLLDQFLFSPIFIGVFLSTLVTLEGRPSQVVPKL 236

Query: 375  QQEWFSSVVANWKLWIPFQFLNFLFVPQQFQVLAANFIALVWNVVLSYKAHKAVI 211
            QQEWFS+V+ANW+LWIPFQFLNF FVPQQFQVLAAN +AL WNV+LS+KAHK ++
Sbjct: 237  QQEWFSAVLANWQLWIPFQFLNFRFVPQQFQVLAANVVALAWNVILSFKAHKEIL 291


>ref|XP_002323213.1| predicted protein [Populus trichocarpa] gi|222867843|gb|EEF04974.1|
            predicted protein [Populus trichocarpa]
          Length = 264

 Score =  297 bits (760), Expect = 4e-78
 Identities = 160/290 (55%), Positives = 189/290 (65%), Gaps = 4/290 (1%)
 Frame = -2

Query: 1068 MILNPVILNCKSPDLIRFMGVLPKPSSHIASQTQITANLFQISAFRSSSFSNYEAPFGLS 889
            M+ NPV L  K+P L  F G   KP+SH + +TQ++ N                      
Sbjct: 1    MVPNPVSLTRKTPLLYCFAGFSCKPTSHSSQRTQLSLNP--------------------- 39

Query: 888  LSGRSKIGLRQKGCDWFRVSAVTXXXXXXXXXXXXXXXXXXXXXXXXG----EKKWSLIS 721
                   G RQ G D  R+ AV+                                WS +S
Sbjct: 40   -------GYRQLGVDQSRLLAVSDGGSGGSGGVGGSAGGGGEGSGASSGSGGNSNWSFLS 92

Query: 720  WYLALLEKHPVLTKAVTSAFLTLIGDLICQFLIDQVTSVDLKRTFLFTFLGVALVGPTLH 541
            WYL LL  +PVLTKAVTSA LT +GDLICQ +IDQV S+DLKRTFLFT LG+ LVGPTLH
Sbjct: 93   WYLNLLANYPVLTKAVTSAILTFMGDLICQLVIDQVPSLDLKRTFLFTLLGLVLVGPTLH 152

Query: 540  FWYLYLSKLVTTPGASGAFLRLVIDQFLFAPTFVAVFLSTLLTLEGRSSLVMPKLQQEWF 361
             WYLYLSK+VT PGASGAFLRL+ DQF+F+P F+ VFLSTL+TLEGR S V+PKL+QEWF
Sbjct: 153  IWYLYLSKMVTVPGASGAFLRLLADQFVFSPIFIGVFLSTLVTLEGRPSQVIPKLKQEWF 212

Query: 360  SSVVANWKLWIPFQFLNFLFVPQQFQVLAANFIALVWNVVLSYKAHKAVI 211
            S+V+ANW+LWIPFQFLNF FVPQQFQVLAAN IALVWNV+LS+KAHK V+
Sbjct: 213  SAVLANWQLWIPFQFLNFRFVPQQFQVLAANVIALVWNVILSFKAHKEVL 262


>ref|XP_003554094.1| PREDICTED: protein sym-1-like [Glycine max]
          Length = 277

 Score =  286 bits (732), Expect = 6e-75
 Identities = 136/176 (77%), Positives = 154/176 (87%)
 Frame = -2

Query: 738 KWSLISWYLALLEKHPVLTKAVTSAFLTLIGDLICQFLIDQVTSVDLKRTFLFTFLGVAL 559
           KWS +SWYLALL K+PV  KA+TS+ L LIGDLICQ +IDQV S+D KRTF+FTFLG AL
Sbjct: 100 KWSFLSWYLALLGKYPVAVKALTSSILNLIGDLICQLVIDQVPSLDFKRTFVFTFLGFAL 159

Query: 558 VGPTLHFWYLYLSKLVTTPGASGAFLRLVIDQFLFAPTFVAVFLSTLLTLEGRSSLVMPK 379
           VGPTLHFWYLYLSKLVT PGASGA LRLV+DQFLF+P F+ VFLSTL+TLEG  S  +PK
Sbjct: 160 VGPTLHFWYLYLSKLVTLPGASGALLRLVLDQFLFSPIFIGVFLSTLVTLEGNPSRAVPK 219

Query: 378 LQQEWFSSVVANWKLWIPFQFLNFLFVPQQFQVLAANFIALVWNVVLSYKAHKAVI 211
           L+QEWFS+V+ANWKLWIPFQFLNF FVPQQFQVLAAN IALVWNV+LS+ AHK V+
Sbjct: 220 LKQEWFSAVLANWKLWIPFQFLNFRFVPQQFQVLAANVIALVWNVILSFMAHKEVL 275


>ref|XP_004136622.1| PREDICTED: protein SYM1-like [Cucumis sativus]
          Length = 297

 Score =  271 bits (693), Expect = 2e-70
 Identities = 148/295 (50%), Positives = 180/295 (61%), Gaps = 16/295 (5%)
 Frame = -2

Query: 1047 LNCKSPDLIRFMGVLPKPSSHIASQTQITANLFQISAFRSSSFS-NYEAPFGLSLSGRSK 871
            L+ K P L   +     P+S  A Q  I   L Q+   R  SF  N+   F       + 
Sbjct: 8    LSLKPPTLCTRISFNGGPTSAFALQAPILGTLVQMKGTRVCSFRHNHRLEF-------ND 60

Query: 870  IGLRQKGCDW-----FRVSAVTXXXXXXXXXXXXXXXXXXXXXXXXGE----------KK 736
            +G RQ+ C       FR+SA +                                      
Sbjct: 61   VGRRQRQCGPLRFTDFRISASSGDGSGDGFGSGAGDGGYGGYGHENSGGGEGDSGKGGNN 120

Query: 735  WSLISWYLALLEKHPVLTKAVTSAFLTLIGDLICQFLIDQVTSVDLKRTFLFTFLGVALV 556
            WS +SWYL LL K+P L K+VTS  L  +GDLICQ + ++  S DL+RTF F+ LG+ LV
Sbjct: 121  WSFLSWYLTLLAKYPALVKSVTSGILNALGDLICQIVFEEAPSADLRRTFRFSLLGLVLV 180

Query: 555  GPTLHFWYLYLSKLVTTPGASGAFLRLVIDQFLFAPTFVAVFLSTLLTLEGRSSLVMPKL 376
            GP LHFWYLYLS+LVT PGASGAF+RL++DQF+F P F+ VFLS LLTLEGR S ++PKL
Sbjct: 181  GPALHFWYLYLSQLVTLPGASGAFVRLLLDQFIFTPVFIGVFLSGLLTLEGRPSDIIPKL 240

Query: 375  QQEWFSSVVANWKLWIPFQFLNFLFVPQQFQVLAANFIALVWNVVLSYKAHKAVI 211
            QQEWFSSVVANWKLWIPFQFLNF FVPQQFQVLAAN +AL WNV+LS+KAHK +I
Sbjct: 241  QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANILALAWNVILSFKAHKEII 295


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