BLASTX nr result

ID: Bupleurum21_contig00018085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018085
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEF79998.1| PHD finger family protein [Corylus heterophylla]       179   4e-43
ref|XP_002892811.1| PHD finger family protein [Arabidopsis lyrat...   178   9e-43
gb|AAF63181.1|AC010657_17 T5E21.1 [Arabidopsis thaliana]              177   2e-42
ref|NP_172903.1| protein alfin-like 7 [Arabidopsis thaliana] gi|...   177   2e-42
gb|AFY26897.1| PHD5 [Morella rubra]                                   176   3e-42

>gb|AEF79998.1| PHD finger family protein [Corylus heterophylla]
          Length = 253

 Score =  179 bits (454), Expect = 4e-43
 Identities = 83/116 (71%), Positives = 96/116 (82%)
 Frame = +1

Query: 166 DLEKFFKECDPEKENLCLYGLPSGNWDVCXXXXXXXXXXXXXALGINFARDGMQEKDWLS 345
           D+EKF+++CDPEKENLCLYGLP+  W+V              ALGINFARDGMQEKDWLS
Sbjct: 33  DVEKFYQQCDPEKENLCLYGLPNETWEVNLPVEEVPPELPEPALGINFARDGMQEKDWLS 92

Query: 346 LVAVHSDVWLISVAFYFGARFGFGKNDRKRLFQMMNDLPTVYEVVTGKVKPSKEAS 513
           LVAVHSD WL++VAFYFGARFGFGKN+RKRLFQM+NDLPT++EVVTG VK SK+ S
Sbjct: 93  LVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQMINDLPTIFEVVTGNVKQSKDQS 148


>ref|XP_002892811.1| PHD finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338653|gb|EFH69070.1| PHD finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 252

 Score =  178 bits (451), Expect = 9e-43
 Identities = 83/116 (71%), Positives = 94/116 (81%)
 Frame = +1

Query: 166 DLEKFFKECDPEKENLCLYGLPSGNWDVCXXXXXXXXXXXXXALGINFARDGMQEKDWLS 345
           D+EKF+ +CDPEKENLCLYGLP+  W+V              ALGINFARDGMQEKDW+S
Sbjct: 33  DVEKFYHQCDPEKENLCLYGLPNETWEVNLPVEEVPPELPEPALGINFARDGMQEKDWIS 92

Query: 346 LVAVHSDVWLISVAFYFGARFGFGKNDRKRLFQMMNDLPTVYEVVTGKVKPSKEAS 513
           LVAVHSD WLISVAFYFGARFGFGKN+RKRLFQM+NDLPT++EVVTG  K SK+ S
Sbjct: 93  LVAVHSDSWLISVAFYFGARFGFGKNERKRLFQMINDLPTIFEVVTGNAKQSKDQS 148


>gb|AAF63181.1|AC010657_17 T5E21.1 [Arabidopsis thaliana]
          Length = 165

 Score =  177 bits (448), Expect = 2e-42
 Identities = 82/116 (70%), Positives = 94/116 (81%)
 Frame = +1

Query: 166 DLEKFFKECDPEKENLCLYGLPSGNWDVCXXXXXXXXXXXXXALGINFARDGMQEKDWLS 345
           D++KF+ +CDPEKENLCLYGLP+  W+V              ALGINFARDGMQEKDW+S
Sbjct: 33  DVQKFYHQCDPEKENLCLYGLPNETWEVNLPVEEVPPELPEPALGINFARDGMQEKDWIS 92

Query: 346 LVAVHSDVWLISVAFYFGARFGFGKNDRKRLFQMMNDLPTVYEVVTGKVKPSKEAS 513
           LVAVHSD WLISVAFYFGARFGFGKN+RKRLFQM+NDLPT++EVVTG  K SK+ S
Sbjct: 93  LVAVHSDSWLISVAFYFGARFGFGKNERKRLFQMINDLPTIFEVVTGNAKQSKDQS 148


>ref|NP_172903.1| protein alfin-like 7 [Arabidopsis thaliana]
           gi|75245845|sp|Q8LA16.1|ALFL7_ARATH RecName: Full=PHD
           finger protein ALFIN-LIKE 7; Short=Protein AL7
           gi|21593666|gb|AAM65633.1| nucleic acid binding protein
           (alfin-1), putative [Arabidopsis thaliana]
           gi|30017229|gb|AAP12848.1| At1g14510 [Arabidopsis
           thaliana] gi|110736110|dbj|BAF00027.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332191052|gb|AEE29173.1| protein alfin-like 7
           [Arabidopsis thaliana]
          Length = 252

 Score =  177 bits (448), Expect = 2e-42
 Identities = 82/116 (70%), Positives = 94/116 (81%)
 Frame = +1

Query: 166 DLEKFFKECDPEKENLCLYGLPSGNWDVCXXXXXXXXXXXXXALGINFARDGMQEKDWLS 345
           D++KF+ +CDPEKENLCLYGLP+  W+V              ALGINFARDGMQEKDW+S
Sbjct: 33  DVQKFYHQCDPEKENLCLYGLPNETWEVNLPVEEVPPELPEPALGINFARDGMQEKDWIS 92

Query: 346 LVAVHSDVWLISVAFYFGARFGFGKNDRKRLFQMMNDLPTVYEVVTGKVKPSKEAS 513
           LVAVHSD WLISVAFYFGARFGFGKN+RKRLFQM+NDLPT++EVVTG  K SK+ S
Sbjct: 93  LVAVHSDSWLISVAFYFGARFGFGKNERKRLFQMINDLPTIFEVVTGNAKQSKDQS 148


>gb|AFY26897.1| PHD5 [Morella rubra]
          Length = 252

 Score =  176 bits (447), Expect = 3e-42
 Identities = 81/119 (68%), Positives = 96/119 (80%)
 Frame = +1

Query: 157 IIADLEKFFKECDPEKENLCLYGLPSGNWDVCXXXXXXXXXXXXXALGINFARDGMQEKD 336
           +  D++KF+++CDPEKENLCLYGLP+  WDV              ALGINFARDGMQEKD
Sbjct: 30  LTTDVDKFYQQCDPEKENLCLYGLPNETWDVNLPVEEVPPELPEPALGINFARDGMQEKD 89

Query: 337 WLSLVAVHSDVWLISVAFYFGARFGFGKNDRKRLFQMMNDLPTVYEVVTGKVKPSKEAS 513
           WLSLVAVHSD WL++VAFYFGARFGFGKN+RKRLFQM+N+LPT++EVVTG VK  K+ S
Sbjct: 90  WLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQMINELPTIFEVVTGNVKQPKDQS 148


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