BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018077
         (680 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281140.2| PREDICTED: RING-H2 finger protein ATL65-like...   122   1e-32
ref|XP_004145402.1| PREDICTED: RING-H2 finger protein ATL65-like...   115   8e-29
ref|XP_002313823.1| predicted protein [Populus trichocarpa] gi|2...   109   1e-25
ref|XP_002519118.1| ring finger protein, putative [Ricinus commu...    98   6e-24
ref|XP_003541102.1| PREDICTED: RING-H2 finger protein ATL65-like...    96   6e-22

>ref|XP_002281140.2| PREDICTED: RING-H2 finger protein ATL65-like [Vitis vinifera]
          Length = 396

 Score =  122 bits (305), Expect(2) = 1e-32
 Identities = 56/76 (73%), Positives = 65/76 (85%)
 Frame = +2

Query: 344 LPVCNHAFHVDCIDIWLRSHANCPLCRTGIFRPISPFTPVMAARIRPSLDEILIESAIIE 523
           LPVC+HAFHVDCIDIWLRSHANCPLCR GIFR  SPF PVMAARIRPSLD+ ++ES ++E
Sbjct: 171 LPVCSHAFHVDCIDIWLRSHANCPLCRAGIFRHESPFIPVMAARIRPSLDDAILESILLE 230

Query: 524 MLTESPQEYETSVWEI 571
            L+E+  E ET+V EI
Sbjct: 231 PLSEAAPESETTVTEI 246



 Score = 43.9 bits (102), Expect(2) = 1e-32
 Identities = 23/32 (71%), Positives = 25/32 (78%)
 Frame = +1

Query: 577 QSSPRRNDQSEDRLIC*DFLLKRSYSFCFERN 672
           + SPRRN QSEDR    DF+LKRSYSF FERN
Sbjct: 250 EPSPRRN-QSEDRFNARDFMLKRSYSFGFERN 280


>ref|XP_004145402.1| PREDICTED: RING-H2 finger protein ATL65-like [Cucumis sativus]
           gi|449472703|ref|XP_004153673.1| PREDICTED: RING-H2
           finger protein ATL65-like [Cucumis sativus]
           gi|449532533|ref|XP_004173235.1| PREDICTED: RING-H2
           finger protein ATL65-like [Cucumis sativus]
          Length = 421

 Score =  115 bits (289), Expect(2) = 8e-29
 Identities = 54/85 (63%), Positives = 63/85 (74%), Gaps = 5/85 (5%)
 Frame = +2

Query: 335 VLPLPVCNHAFHVDCIDIWLRSHANCPLCRTGIFRPISPFTPVMAARIRPSLDEILIESA 514
           V  LP+C+HAFHVDCID+WLRSHANCPLCR  +FRP SPFTPVMAARIRPSLD+ ++ S 
Sbjct: 178 VRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSI 237

Query: 515 IIEMLTESP-----QEYETSVWEIT 574
           I+E L E P       Y  +  EIT
Sbjct: 238 ILEPLAEGPPIPNRDSYHATESEIT 262



 Score = 37.4 bits (85), Expect(2) = 8e-29
 Identities = 18/30 (60%), Positives = 23/30 (76%)
 Frame = +1

Query: 586 PRRNDQSEDRLIC*DFLLKRSYSFCFERNL 675
           PR ++  ED++   DFLLKRSYSF FER+L
Sbjct: 268 PRNSNSVEDQMNGRDFLLKRSYSFGFERSL 297


>ref|XP_002313823.1| predicted protein [Populus trichocarpa] gi|222850231|gb|EEE87778.1|
           predicted protein [Populus trichocarpa]
          Length = 367

 Score =  109 bits (273), Expect(2) = 1e-25
 Identities = 51/71 (71%), Positives = 58/71 (81%), Gaps = 2/71 (2%)
 Frame = +2

Query: 335 VLPLPVCNHAFHVDCIDIWLRSHANCPLCRTGIFRPISPFTPVMAARIRPSLDEILIESA 514
           V  LPVC+HAFHVDCIDIWLRSHANCPLCR GIFR  SPF PVMAARIRPSLDE ++ S 
Sbjct: 110 VRTLPVCSHAFHVDCIDIWLRSHANCPLCRAGIFRAESPFIPVMAARIRPSLDETILRST 169

Query: 515 I--IEMLTESP 541
           +  +E + +SP
Sbjct: 170 LLPLEPIIQSP 180



 Score = 32.7 bits (73), Expect(2) = 1e-25
 Identities = 22/40 (55%), Positives = 24/40 (60%), Gaps = 7/40 (17%)
 Frame = +1

Query: 577 QSSPRR------NDQSEDRLIC*D-FLLKRSYSFCFERNL 675
           + SPRR      N  SEDR    D F LKRSYSF FER+L
Sbjct: 204 EPSPRRHSMNNFNTNSEDRFNGRDHFFLKRSYSFGFERSL 243


>ref|XP_002519118.1| ring finger protein, putative [Ricinus communis]
           gi|223541781|gb|EEF43329.1| ring finger protein,
           putative [Ricinus communis]
          Length = 402

 Score = 97.8 bits (242), Expect(2) = 6e-24
 Identities = 48/69 (69%), Positives = 55/69 (79%)
 Frame = +2

Query: 335 VLPLPVCNHAFHVDCIDIWLRSHANCPLCRTGIFRPISPFTPVMAARIRPSLDEILIESA 514
           V  LPVC+HAFHVDCIDIWLRSHANCPLCR  IF+  SPF PVMAARIRPSLD+ +I   
Sbjct: 165 VRTLPVCSHAFHVDCIDIWLRSHANCPLCRARIFQ-TSPFVPVMAARIRPSLDDTII--L 221

Query: 515 IIEMLTESP 541
            IE + ++P
Sbjct: 222 PIESMIQTP 230



 Score = 38.9 bits (89), Expect(2) = 6e-24
 Identities = 23/37 (62%), Positives = 25/37 (67%), Gaps = 5/37 (13%)
 Frame = +1

Query: 580 SSPRRND-----QSEDRLIC*DFLLKRSYSFCFERNL 675
           +SP RN      QSEDR    DFLLKRSYSF FER+L
Sbjct: 244 ASPIRNSHNFYIQSEDRFSRRDFLLKRSYSFGFERSL 280


>ref|XP_003541102.1| PREDICTED: RING-H2 finger protein ATL65-like [Glycine max]
          Length = 393

 Score = 96.3 bits (238), Expect(2) = 6e-22
 Identities = 45/77 (58%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
 Frame = +2

Query: 335 VLPLPVCNHAFHVDCIDIWLRSHANCPLCRTGIFRPISPFTPVMAARIRPSL-DEILIES 511
           V  LPVC+H FHVDCID WLRSHANCPLCR G+    SPFTP+MAARIRPSL D+ ++  
Sbjct: 147 VRTLPVCSHTFHVDCIDAWLRSHANCPLCRAGVLCTDSPFTPMMAARIRPSLDDDTILHR 206

Query: 512 AIIEMLTESPQEYETSV 562
             I+ L + P +  ++V
Sbjct: 207 ISIDPLIDLPPQPASAV 223



 Score = 33.9 bits (76), Expect(2) = 6e-22
 Identities = 21/38 (55%), Positives = 25/38 (65%), Gaps = 5/38 (13%)
 Frame = +1

Query: 577 QSSPRRNDQ-----SEDRLIC*DFLLKRSYSFCFERNL 675
           +++PRRN       SED     DFLLKRSYSF FER+L
Sbjct: 237 ENTPRRNQNHANVNSEDCFR--DFLLKRSYSFGFERSL 272