BLASTX nr result

ID: Bupleurum21_contig00018063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018063
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66402.1| hypothetical protein VITISV_026848 [Vitis vinifera]   124   1e-26
emb|CAN68209.1| hypothetical protein VITISV_041835 [Vitis vinifera]   122   4e-26
gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-ty...   121   6e-26
emb|CAN65059.1| hypothetical protein VITISV_008903 [Vitis vinifera]   121   6e-26
emb|CAN76317.1| hypothetical protein VITISV_012360 [Vitis vinifera]   121   8e-26

>emb|CAN66402.1| hypothetical protein VITISV_026848 [Vitis vinifera]
          Length = 213

 Score =  124 bits (310), Expect = 1e-26
 Identities = 60/156 (38%), Positives = 100/156 (64%), Gaps = 1/156 (0%)
 Frame = +3

Query: 84  QGNRKSILVLDSGCSGHMTGNKALLSEFVEKAGPKVSYGDGNIGYTLGYGKI-NLGNVII 260
           +G++K    LDSGCS HMTG+++  +   ++ G  V++GD + G  +G G I N  + +I
Sbjct: 33  EGSKKDKWFLDSGCSRHMTGDESKFAFLTKRKGGYVTFGDNSKGRIIGQGNIGNDTSSLI 92

Query: 261 TDVALVPGLKHDLLSVSQICDRGFRVDFHPEHCEVINKSTGKVVLVGHRHNNIYEVSLEA 440
             V LV GLKH+LLS+SQ+CD+G++V F   HC + +    K + +GHR +N+Y +++ +
Sbjct: 93  ESVLLVDGLKHNLLSISQLCDKGYKVIFEASHCIIKDIQNDKTIFMGHRCDNVYAINI-S 151

Query: 441 NSDGKAVCLSTRLSSEESWKWHKKLSHLNLNNINEL 548
             DG   C S+    ++SW WH++L H N++ I++L
Sbjct: 152 KYDGHDRCFSS--MHDQSWLWHRRLGHANMDLISQL 185


>emb|CAN68209.1| hypothetical protein VITISV_041835 [Vitis vinifera]
          Length = 405

 Score =  122 bits (306), Expect = 4e-26
 Identities = 61/156 (39%), Positives = 98/156 (62%), Gaps = 1/156 (0%)
 Frame = +3

Query: 84  QGNRKSILVLDSGCSGHMTGNKALLSEFVEKAGPKVSYGDGNIGYTLGYGKINLG-NVII 260
           +G++     LDSGCS HMTG+++      +K G  V++GD   G  +G G I+ G + +I
Sbjct: 175 KGSKNDKWFLDSGCSRHMTGDESKFVFLTKKNGGYVTFGDNAKGRIIGQGNISNGTSSLI 234

Query: 261 TDVALVPGLKHDLLSVSQICDRGFRVDFHPEHCEVINKSTGKVVLVGHRHNNIYEVSLEA 440
             V LV GLKH+LLS+SQ+CD+GF+V F   HC + +    K + +GHR +N+Y +++ +
Sbjct: 235 ESVLLVDGLKHNLLSISQLCDKGFKVIFEASHCIIKDIQNDKTIFMGHRCDNVYAINI-S 293

Query: 441 NSDGKAVCLSTRLSSEESWKWHKKLSHLNLNNINEL 548
             DG   C S+    ++SW WH++L H N++ I++L
Sbjct: 294 KYDGHDRCFSS--MHDQSWLWHRRLGHANVDLISQL 327


>gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase
            aspartic, catalytic [Medicago truncatula]
          Length = 1715

 Score =  121 bits (304), Expect = 6e-26
 Identities = 59/146 (40%), Positives = 85/146 (58%)
 Frame = +3

Query: 111  LDSGCSGHMTGNKALLSEFVEKAGPKVSYGDGNIGYTLGYGKINLGNVIITDVALVPGLK 290
            LDSGCS HMTG KAL      K G +V +G    G  +G G I   ++ I +V LV GLK
Sbjct: 672  LDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTIGNSSISINNVWLVDGLK 731

Query: 291  HDLLSVSQICDRGFRVDFHPEHCEVINKSTGKVVLVGHRHNNIYEVSLEANSDGKAVCLS 470
            H+LLS+SQ CD G+ V F   +C ++NK    +   G R  N+Y+++    +D K VCL 
Sbjct: 732  HNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLADQKVVCLL 791

Query: 471  TRLSSEESWKWHKKLSHLNLNNINEL 548
            +   +++ W WHK+L H N   I+++
Sbjct: 792  S--MNDKKWVWHKRLGHANWRLISKI 815


>emb|CAN65059.1| hypothetical protein VITISV_008903 [Vitis vinifera]
          Length = 539

 Score =  121 bits (304), Expect = 6e-26
 Identities = 59/147 (40%), Positives = 94/147 (63%), Gaps = 1/147 (0%)
 Frame = +3

Query: 111 LDSGCSGHMTGNKALLSEFVEKAGPKVSYGDGNIGYTLGYGKI-NLGNVIITDVALVPGL 287
           LDSGCS HMTG+++  +   ++ G  V++GD + G  +G G I N  + +I  V LV GL
Sbjct: 363 LDSGCSRHMTGDESKFAFLTKRKGGYVTFGDNSKGRIIGQGNIGNXTSSLIESVLLVDGL 422

Query: 288 KHDLLSVSQICDRGFRVDFHPEHCEVINKSTGKVVLVGHRHNNIYEVSLEANSDGKAVCL 467
           KH+LLS+SQ+CD+GF+V F   HC + +    K + +GHR +N+Y +++ +  DG   C 
Sbjct: 423 KHNLLSISQLCDKGFKVIFEXSHCIIKDIQNDKTIFMGHRCDNVYAINI-SKYDGHDRCF 481

Query: 468 STRLSSEESWKWHKKLSHLNLNNINEL 548
           S+    ++SW WH++L H N++ I +L
Sbjct: 482 SS--MHDQSWLWHRRLGHANMDLIXQL 506


>emb|CAN76317.1| hypothetical protein VITISV_012360 [Vitis vinifera]
          Length = 1409

 Score =  121 bits (303), Expect = 8e-26
 Identities = 58/156 (37%), Positives = 99/156 (63%), Gaps = 1/156 (0%)
 Frame = +3

Query: 84  QGNRKSILVLDSGCSGHMTGNKALLSEFVEKAGPKVSYGDGNIGYTLGYGKINLG-NVII 260
           +G+ K    LDSGCS HM GN++  +   ++ G  V++G+ + G  +G G I  G + +I
Sbjct: 457 KGSMKDKWFLDSGCSRHMIGNESKFAFLTKRKGGYVTFGENSKGMIIGQGNIGNGTSSLI 516

Query: 261 TDVALVPGLKHDLLSVSQICDRGFRVDFHPEHCEVINKSTGKVVLVGHRHNNIYEVSLEA 440
             V LV GLK+++LS+SQ+CD+GF+V F   HC + +    K + +GHR +N+Y +++ +
Sbjct: 517 ESVLLVDGLKYNILSISQLCDKGFKVIFEASHCIIKDIQNDKTIFMGHRCDNVYAINI-S 575

Query: 441 NSDGKAVCLSTRLSSEESWKWHKKLSHLNLNNINEL 548
             DG   C S++   ++SW WH++L H N++ I++L
Sbjct: 576 KYDGHDRCFSSK--HDQSWLWHRRLGHANMDLISQL 609


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