BLASTX nr result

ID: Bupleurum21_contig00018062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018062
         (796 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA40444.1| ubiquitin-conjugating enzyme family protein-like ...   276   5e-72
ref|XP_003632650.1| PREDICTED: ubiquitin-conjugating enzyme E2 v...   276   5e-72
ref|XP_002309399.1| predicted protein [Populus trichocarpa] gi|1...   275   6e-72
ref|XP_004136503.1| PREDICTED: ubiquitin-conjugating enzyme E2 v...   275   1e-71
gb|ACF06539.1| ubiquitin-conjugating enzyme family protein [Elae...   275   1e-71

>gb|ABA40444.1| ubiquitin-conjugating enzyme family protein-like protein [Solanum
           tuberosum] gi|78191460|gb|ABB29951.1|
           ubiquitin-conjugating enzyme family protein-like
           [Solanum tuberosum]
          Length = 146

 Score =  276 bits (705), Expect = 5e-72
 Identities = 127/146 (86%), Positives = 136/146 (93%)
 Frame = +2

Query: 131 MTLGSGGSSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDVYMRSWTGTIIGPHNSV 310
           MTLGSGGSSVVVPRNFR      RGEKGIGDGTVSYGMDDGDD+YMRSWTGTIIGPHNSV
Sbjct: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNSV 60

Query: 311 HEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVHHETGVVESKKFGILSNWQRDYTMEN 490
           HEGRIYQLKLFCDKDYPEKPP+VRFHSR+NMTCV+HETGVVE KKF +LSNWQR+YTME+
Sbjct: 61  HEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFALLSNWQREYTMED 120

Query: 491 ILIQLKKEMSAPQNRKLVQPPEGTCF 568
           IL QLKKEM++P NRKLVQPPEGTCF
Sbjct: 121 ILTQLKKEMASPHNRKLVQPPEGTCF 146


>ref|XP_003632650.1| PREDICTED: ubiquitin-conjugating enzyme E2 variant 1D-like isoform
           2 [Vitis vinifera] gi|297740182|emb|CBI30364.3| unnamed
           protein product [Vitis vinifera]
          Length = 146

 Score =  276 bits (705), Expect = 5e-72
 Identities = 129/146 (88%), Positives = 137/146 (93%)
 Frame = +2

Query: 131 MTLGSGGSSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDVYMRSWTGTIIGPHNSV 310
           MTLGSGGSSVVVPRNFR      RGEKGIGDGTVSYGMDDGDD+YMRSWTGTIIGPHN+V
Sbjct: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60

Query: 311 HEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVHHETGVVESKKFGILSNWQRDYTMEN 490
           HEGRIYQLKLFCDKDYPEKPP+VRFHSRINMTCV+HETGVVE KKFGIL+NWQR+YTME+
Sbjct: 61  HEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGILANWQREYTMED 120

Query: 491 ILIQLKKEMSAPQNRKLVQPPEGTCF 568
           IL QLKKEM+APQNRKLVQPPEGT F
Sbjct: 121 ILTQLKKEMAAPQNRKLVQPPEGTYF 146


>ref|XP_002309399.1| predicted protein [Populus trichocarpa] gi|118484540|gb|ABK94144.1|
           unknown [Populus trichocarpa]
           gi|222855375|gb|EEE92922.1| predicted protein [Populus
           trichocarpa]
          Length = 146

 Score =  275 bits (704), Expect = 6e-72
 Identities = 128/146 (87%), Positives = 136/146 (93%)
 Frame = +2

Query: 131 MTLGSGGSSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDVYMRSWTGTIIGPHNSV 310
           MTLGSGGSSVVVPRNFR      RGEKGIGDGTVSYGMDDGDD+YMRSWTGT+IGPHN+V
Sbjct: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTVIGPHNTV 60

Query: 311 HEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVHHETGVVESKKFGILSNWQRDYTMEN 490
           HEGRIYQLKLFCDKDYPEKPP+VRFHSRINMTCV+HETGVVE KKFG+LSNWQRDYTME+
Sbjct: 61  HEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLSNWQRDYTMED 120

Query: 491 ILIQLKKEMSAPQNRKLVQPPEGTCF 568
           IL QLKKEM+AP NRKLVQPPEGT F
Sbjct: 121 ILTQLKKEMTAPHNRKLVQPPEGTYF 146


>ref|XP_004136503.1| PREDICTED: ubiquitin-conjugating enzyme E2 variant 1C-like [Cucumis
           sativus] gi|449526672|ref|XP_004170337.1| PREDICTED:
           ubiquitin-conjugating enzyme E2 variant 1C-like [Cucumis
           sativus]
          Length = 146

 Score =  275 bits (702), Expect = 1e-71
 Identities = 127/146 (86%), Positives = 137/146 (93%)
 Frame = +2

Query: 131 MTLGSGGSSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDVYMRSWTGTIIGPHNSV 310
           MTLGSGGSSVVVPRNFR      RGEKGIGDGTVSYGMDDGDD+YMRSWTGTIIGPHN+V
Sbjct: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60

Query: 311 HEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVHHETGVVESKKFGILSNWQRDYTMEN 490
           HEGRIYQLKLFCDKDYPEKPP+VRFHSR+NMTCV+HETGVVESKKFG+L+NWQR+YTME+
Sbjct: 61  HEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVESKKFGLLANWQREYTMED 120

Query: 491 ILIQLKKEMSAPQNRKLVQPPEGTCF 568
           IL QLKKEM+AP NRKLVQPPEGT F
Sbjct: 121 ILTQLKKEMAAPHNRKLVQPPEGTYF 146


>gb|ACF06539.1| ubiquitin-conjugating enzyme family protein [Elaeis guineensis]
          Length = 146

 Score =  275 bits (702), Expect = 1e-71
 Identities = 128/146 (87%), Positives = 136/146 (93%)
 Frame = +2

Query: 131 MTLGSGGSSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDVYMRSWTGTIIGPHNSV 310
           MT+GSGGSSVVVPRNFR      RGEKGIGDGTVSYGMDDGDD+YMRSWTGTIIGPHNSV
Sbjct: 1   MTIGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNSV 60

Query: 311 HEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVHHETGVVESKKFGILSNWQRDYTMEN 490
           HEGRIYQLKLFCDKDYPEKPP VRFHSRINMTCV+HETGVVE KKFGIL+NWQR+YTME+
Sbjct: 61  HEGRIYQLKLFCDKDYPEKPPGVRFHSRINMTCVNHETGVVEPKKFGILANWQREYTMED 120

Query: 491 ILIQLKKEMSAPQNRKLVQPPEGTCF 568
           IL+QLKKEM+AP NRKLVQPPEGT F
Sbjct: 121 ILVQLKKEMAAPHNRKLVQPPEGTFF 146


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