BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018057
         (1428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271463.2| PREDICTED: splicing factor U2af large subuni...   471   e-149
emb|CBI17547.3| unnamed protein product [Vitis vinifera]              471   e-149
sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large...   468   e-149
emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]   471   e-148
gb|AEI98617.1| hypothetical protein 111O18.4 [Coffea canephora]       468   e-147

>ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B-like [Vitis vinifera]
          Length = 568

 Score =  471 bits (1213), Expect(2) = e-149
 Identities = 249/330 (75%), Positives = 259/330 (78%)
 Frame = +1

Query: 1    GQILGTTPALPGMFSNMFPITPGQFGAIPAAMPVQAMTQQATRHARRVYVGGLSPTANEQ 180
            GQI GTTP +PGMF NMFP+  GQFGA+P  MPVQAMTQQATRHARRVYVGGLSPTANEQ
Sbjct: 190  GQIPGTTPTIPGMFPNMFPLASGQFGALPV-MPVQAMTQQATRHARRVYVGGLSPTANEQ 248

Query: 181  SVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA 360
            SVATFFS VMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA
Sbjct: 249  SVATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA 308

Query: 361  PVKVRRPSDYNPSLAATLGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
            PVKVRRPSDYNPSLAATLGP                                        
Sbjct: 309  PVKVRRPSDYNPSLAATLGP------------------SQPNPNLNLAAVGLTPGSAGGL 350

Query: 541  EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDI 720
            EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDI
Sbjct: 351  EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDI 410

Query: 721  ACAALNGIKMGDKTLTVRRANQGTTQPKPEQESVLLHAQQQIALQRLMLQPTSVASKILC 900
            ACAALNGIKMGDKTLTVRRANQG +QPKPEQE+VLLHAQQQIALQRLM QP ++A+K++C
Sbjct: 411  ACAALNGIKMGDKTLTVRRANQGASQPKPEQENVLLHAQQQIALQRLMFQPGALATKVVC 470

Query: 901  LTQVVTXXXXXXXXXXXXXXXXXRTECGKF 990
            LTQVV                  R E GKF
Sbjct: 471  LTQVVNADELQDDEAYEDIVEDMRIEGGKF 500



 Score = 84.3 bits (207), Expect(2) = e-149
 Identities = 42/68 (61%), Positives = 46/68 (67%)
 Frame = +2

Query: 1061 GDMVNVVIXXXXXXXXXXXXXXKVFLEYVDAESASKARAGLNGRKFGGNQVVAVFYPENK 1240
            G++VNV I              KVFLEY D + A+KAR GLNGRKF GNQVVAVFYPENK
Sbjct: 501  GNLVNVAIPRPKPNGEPTPGLGKVFLEYADIDGATKARTGLNGRKFDGNQVVAVFYPENK 560

Query: 1241 FFQQEYDG 1264
            F Q EYDG
Sbjct: 561  FSQGEYDG 568


>emb|CBI17547.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score =  471 bits (1213), Expect(2) = e-149
 Identities = 249/330 (75%), Positives = 259/330 (78%)
 Frame = +1

Query: 1   GQILGTTPALPGMFSNMFPITPGQFGAIPAAMPVQAMTQQATRHARRVYVGGLSPTANEQ 180
           GQI GTTP +PGMF NMFP+  GQFGA+P  MPVQAMTQQATRHARRVYVGGLSPTANEQ
Sbjct: 15  GQIPGTTPTIPGMFPNMFPLASGQFGALPV-MPVQAMTQQATRHARRVYVGGLSPTANEQ 73

Query: 181 SVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA 360
           SVATFFS VMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA
Sbjct: 74  SVATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA 133

Query: 361 PVKVRRPSDYNPSLAATLGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           PVKVRRPSDYNPSLAATLGP                                        
Sbjct: 134 PVKVRRPSDYNPSLAATLGP------------------SQPNPNLNLAAVGLTPGSAGGL 175

Query: 541 EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDI 720
           EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDI
Sbjct: 176 EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDI 235

Query: 721 ACAALNGIKMGDKTLTVRRANQGTTQPKPEQESVLLHAQQQIALQRLMLQPTSVASKILC 900
           ACAALNGIKMGDKTLTVRRANQG +QPKPEQE+VLLHAQQQIALQRLM QP ++A+K++C
Sbjct: 236 ACAALNGIKMGDKTLTVRRANQGASQPKPEQENVLLHAQQQIALQRLMFQPGALATKVVC 295

Query: 901 LTQVVTXXXXXXXXXXXXXXXXXRTECGKF 990
           LTQVV                  R E GKF
Sbjct: 296 LTQVVNADELQDDEAYEDIVEDMRIEGGKF 325



 Score = 84.3 bits (207), Expect(2) = e-149
 Identities = 42/68 (61%), Positives = 46/68 (67%)
 Frame = +2

Query: 1061 GDMVNVVIXXXXXXXXXXXXXXKVFLEYVDAESASKARAGLNGRKFGGNQVVAVFYPENK 1240
            G++VNV I              KVFLEY D + A+KAR GLNGRKF GNQVVAVFYPENK
Sbjct: 326  GNLVNVAIPRPKPNGEPTPGLGKVFLEYADIDGATKARTGLNGRKFDGNQVVAVFYPENK 385

Query: 1241 FFQQEYDG 1264
            F Q EYDG
Sbjct: 386  FSQGEYDG 393


>sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large subunit B; AltName:
            Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa
            subunit B; AltName: Full=U2 small nuclear
            ribonucleoprotein auxiliary factor large subunit B;
            Short=U2 snRNP auxiliary factor large subunit B
            gi|3850821|emb|CAA77135.1| U2 snRNP auxiliary factor,
            large subunit [Nicotiana plumbaginifolia]
          Length = 573

 Score =  468 bits (1205), Expect(2) = e-149
 Identities = 245/330 (74%), Positives = 259/330 (78%)
 Frame = +1

Query: 1    GQILGTTPALPGMFSNMFPITPGQFGAIPAAMPVQAMTQQATRHARRVYVGGLSPTANEQ 180
            GQ+ GT P +PGMF NMFP+  GQFGA+P  MP+QAMTQQATRHARRVYVGGL   ANEQ
Sbjct: 195  GQVPGTNPPIPGMFPNMFPLASGQFGALPV-MPIQAMTQQATRHARRVYVGGLPAHANEQ 253

Query: 181  SVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA 360
            SVATFFSHVMSAIGGNTAGPGDAVVNVYIN+EKKFAFVEMRSVEEASNAMALDGIIFEGA
Sbjct: 254  SVATFFSHVMSAIGGNTAGPGDAVVNVYINYEKKFAFVEMRSVEEASNAMALDGIIFEGA 313

Query: 361  PVKVRRPSDYNPSLAATLGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
            P KVRRPSDYNPSLAATLGP                                        
Sbjct: 314  PCKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLSPGSAGGL------------------ 355

Query: 541  EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDI 720
            EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQD+SVTDI
Sbjct: 356  EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDVSVTDI 415

Query: 721  ACAALNGIKMGDKTLTVRRANQGTTQPKPEQESVLLHAQQQIALQRLMLQPTSVASKILC 900
            ACAALNGIKMGDKTLTVRRANQGTTQPKPEQESVLLHAQQQIALQRLMLQP ++A+K+L 
Sbjct: 416  ACAALNGIKMGDKTLTVRRANQGTTQPKPEQESVLLHAQQQIALQRLMLQPATLATKVLS 475

Query: 901  LTQVVTXXXXXXXXXXXXXXXXXRTECGKF 990
            LT+V++                 RTECGKF
Sbjct: 476  LTEVISADELNDDEDYQDILEDMRTECGKF 505



 Score = 87.0 bits (214), Expect(2) = e-149
 Identities = 42/68 (61%), Positives = 48/68 (70%)
 Frame = +2

Query: 1061 GDMVNVVIXXXXXXXXXXXXXXKVFLEYVDAESASKARAGLNGRKFGGNQVVAVFYPENK 1240
            G +VNVVI              KVFLEY D +S+SKAR  LNGRKFGGNQVVAVFYPENK
Sbjct: 506  GSLVNVVIPRPSPNGEPTPGVGKVFLEYADVDSSSKARQSLNGRKFGGNQVVAVFYPENK 565

Query: 1241 FFQQEYDG 1264
            F++ +YDG
Sbjct: 566  FYEGDYDG 573


>emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]
          Length = 565

 Score =  471 bits (1213), Expect(2) = e-148
 Identities = 249/330 (75%), Positives = 259/330 (78%)
 Frame = +1

Query: 1    GQILGTTPALPGMFSNMFPITPGQFGAIPAAMPVQAMTQQATRHARRVYVGGLSPTANEQ 180
            GQI GTTP +PGMF NMFP+  GQFGA+P  MPVQAMTQQATRHARRVYVGGLSPTANEQ
Sbjct: 187  GQIPGTTPTIPGMFPNMFPLASGQFGALPV-MPVQAMTQQATRHARRVYVGGLSPTANEQ 245

Query: 181  SVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA 360
            SVATFFS VMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA
Sbjct: 246  SVATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA 305

Query: 361  PVKVRRPSDYNPSLAATLGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
            PVKVRRPSDYNPSLAATLGP                                        
Sbjct: 306  PVKVRRPSDYNPSLAATLGP------------------SQPNPNLNLAAVGLTPGSAGGL 347

Query: 541  EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDI 720
            EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDI
Sbjct: 348  EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDI 407

Query: 721  ACAALNGIKMGDKTLTVRRANQGTTQPKPEQESVLLHAQQQIALQRLMLQPTSVASKILC 900
            ACAALNGIKMGDKTLTVRRANQG +QPKPEQE+VLLHAQQQIALQRLM QP ++A+K++C
Sbjct: 408  ACAALNGIKMGDKTLTVRRANQGASQPKPEQENVLLHAQQQIALQRLMFQPGALATKVVC 467

Query: 901  LTQVVTXXXXXXXXXXXXXXXXXRTECGKF 990
            LTQVV                  R E GKF
Sbjct: 468  LTQVVNADELQDDEAYEDIVEDMRIEGGKF 497



 Score = 83.6 bits (205), Expect(2) = e-148
 Identities = 42/68 (61%), Positives = 45/68 (66%)
 Frame = +2

Query: 1061 GDMVNVVIXXXXXXXXXXXXXXKVFLEYVDAESASKARAGLNGRKFGGNQVVAVFYPENK 1240
            G++VNV I              KVFLEY D + A KAR GLNGRKF GNQVVAVFYPENK
Sbjct: 498  GNLVNVAIPRPKPNGEPTPGLGKVFLEYADIDGAXKARTGLNGRKFDGNQVVAVFYPENK 557

Query: 1241 FFQQEYDG 1264
            F Q EYDG
Sbjct: 558  FSQGEYDG 565


>gb|AEI98617.1| hypothetical protein 111O18.4 [Coffea canephora]
          Length = 570

 Score =  468 bits (1205), Expect(2) = e-147
 Identities = 246/329 (74%), Positives = 257/329 (78%)
 Frame = +1

Query: 4    QILGTTPALPGMFSNMFPITPGQFGAIPAAMPVQAMTQQATRHARRVYVGGLSPTANEQS 183
            Q+ G  PA+PG+F NMF +  GQ GA+P  MPVQAMTQQATRHARRVYVGGL PTANEQS
Sbjct: 194  QVTGAAPAVPGVFPNMFSLPTGQLGALPV-MPVQAMTQQATRHARRVYVGGLPPTANEQS 252

Query: 184  VATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP 363
            VATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP
Sbjct: 253  VATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP 312

Query: 364  VKVRRPSDYNPSLAATLGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE 543
            VKVRRPSDYNPSLAATLGP                                        E
Sbjct: 313  VKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGL------------------E 354

Query: 544  GPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIA 723
            GPDRIFVGGLPYYFTE QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIA
Sbjct: 355  GPDRIFVGGLPYYFTEGQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIA 414

Query: 724  CAALNGIKMGDKTLTVRRANQGTTQPKPEQESVLLHAQQQIALQRLMLQPTSVASKILCL 903
            CAALNGIKMGDKTLTVRRANQG TQPKPEQESVLLHAQQQIALQ+LMLQP ++A+K+LCL
Sbjct: 415  CAALNGIKMGDKTLTVRRANQGVTQPKPEQESVLLHAQQQIALQKLMLQPGTLATKVLCL 474

Query: 904  TQVVTXXXXXXXXXXXXXXXXXRTECGKF 990
            TQVV+                 R ECGKF
Sbjct: 475  TQVVSADELRDDEDYADILEDMRLECGKF 503



 Score = 82.0 bits (201), Expect(2) = e-147
 Identities = 40/66 (60%), Positives = 47/66 (71%)
 Frame = +2

Query: 1067 MVNVVIXXXXXXXXXXXXXXKVFLEYVDAESASKARAGLNGRKFGGNQVVAVFYPENKFF 1246
            +VN+VI              KVFLEY D ESA+KAR GL+GR+FGGNQVVAVFYPEN+F 
Sbjct: 505  LVNLVIPRPSPTGDPTPGVGKVFLEYADVESANKARQGLHGRRFGGNQVVAVFYPENRFS 564

Query: 1247 QQEYDG 1264
            Q +YDG
Sbjct: 565  QGDYDG 570